1: CASP9 caspase 9, apoptosis-related cysteine peptidase [ Homo sapiens ]

GeneID: 842 updated 8-Nov-2009

[Top][Help]Summary

Official Symbol
CASP9provided by HGNC
Official Full Name
caspase 9, apoptosis-related cysteine peptidaseprovided by HGNC
Primary Source
HGNC:1511
Locus Tag
RP11-265F14.3
See related
Ensembl:ENSG00000132906; HPRD:03756; MIM:602234
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MCH6; APAF3; APAF-3; ICE-LAP6; CASPASE-9c; CASP9
Summary
This gene encodes a member of the cysteine-aspartic acid protease (caspase) family. Sequential activation of caspases plays a central role in the execution-phase of cell apoptosis. Caspases exist as inactive proenzymes which undergo proteolytic processing at conserved aspartic residues to produce two subunits, large and small, that dimerize to form the active enzyme. This protein is processed by caspase APAF1; this step is thought to be one of the earliest in the caspase activation cascade. Alternative splicing results in two transcript variants which encode different isoforms. [provided by RefSeq]

[Top][Help]Genomic regions, transcripts, and products

(minus strand) Go to reference sequence detailsTry our new Sequence Viewer


[Top][Help]Genomic context

chromosome: 1; Location: 1p36.3-p36.1See CASP9 in MapViewer

[Top][Help]Bibliography

Related Articles in PubMed

GeneRIFs: Gene References Into Function What's a GeneRIF?

PubMed 1. Data show that the mDRA-6-induced apoptosis was repressed by 77.9% by Caspase-8 inhibitor ZIF, 54.2% by Caspase-3 inhibitor ZDF, and 8.7% by Caspase-9 inhibitor ZLF, but was not repressed by Caspase-10 inhibitor ZAF.
PubMed 2. The caspase-9-cleaved form of Sema7A reveals abundant caspase-9-activated cells in 2-year-old (aged) but not in 2-month-old (young) mice.
PubMed 3. Polymorphism in Caspase 9-1263 was observed to play a protective role in susceptibility to BC risk. Caspase 9 gene variants were also associated with reduced risk of NMBIC stages.
PubMed 4. Our results suggest that the presence of the G/G genotype represents a higher risk factor in our MS population and a differential production of CASP-9 might be a contributory factor in determining the severity of MS.
PubMed 5. Data suggest that in the absence of its ligand Shh the dependence receptor Patched serves as the anchor for a caspase-activating complex that includes DRAL, and caspase-9.
PubMed 6. The oxidative modification of caspase-9 by reactive oxygen species can mediate its interaction with apoptotic protease-activating factor 1, and can promote its formation of disulfide-linked complexes.
PubMed 7. Observational study of gene-disease association and gene-gene interaction. (HuGE Navigator)
PubMed 8. Study confirms the association between CASP9 gene and non-small cell lung cancer oncogenesis, rs1052576 which locates in exon 5 of CASP9 gene is associated with NSCLC.
PubMed 9. Clinical trial of gene-disease association, gene-environment interaction, and pharmacogenomic / toxicogenomic. (HuGE Navigator)
PubMed 10. Extracellular adenosine induces apoptosis in Caco-2 cells by activating caspase-9 and the downstream effector caspase caspase-3 in association with mitochondrial damage via A(2a) adenosine receptors.
PubMed 11. Results describe the immunohistochemical distribution of caspase 3, 9 and Bax in intracranial U87 glioblastoma xenografts, and show that xenografts contain cells positive for caspase-3, caspase-9, and Bax.
PubMed 12. DYRK1A regulates caspase-9-mediated apoptosis during retina development
PubMed 13. Observational study of gene-disease association, gene-environment interaction, and pharmacogenomic / toxicogenomic. (HuGE Navigator)
PubMed 14. Regulation of apoptosis through inhibitory phosphorylation of caspase 9 may play a role in the function of DYRK1A during development and in pathogenesis.
PubMed 15. an apoptotic inhibitory complex comprised of DR5, FADD, caspase-8, and c-FLIP(L) exists in MCF-7 cells, and the absence of c-FLIP(L) from this complex induces DR5- and FADD-mediated caspase-8 activation in the death inducing signaling complex
PubMed 16. the simultaneous downregulation of uPAR and MMP-9 induces apoptosome-mediated apoptosis through FADD-associated protein RIP and caspase 9
PubMed 17. Caspase-3 and caspase-7 exhibit differential activity toward multiple substrate proteins, including Bid, XIAP, gelsolin, caspase-6, and cochaperone p23.
PubMed 18. These results illustrate that JEV infection triggers caspase cascades involving the initiators caspase-8 and -9, probably through FADD-independent but mitochondrion-dependent pathways.
PubMed 19. Western blotting suggests that vinorelbine cleaves caspase-3, -9 and -8 and reduces the amount of mitochondrial cytochrome c.
PubMed 20. Melatonin maintains mitochondrial membrane potential and attenuates activation of initiator (casp-9) and effector caspases (casp-3/casp-7) and PARP in UVR-exposed HaCaT keratinocytes
PubMed 21. It is concluded that P. aeruginosa can induce apoptosis with an up-regulated expression of Bax and a down-regulated expression of Bcl-2, which resulted in increased levels of cytochrome c release and increased caspase-3 and -9 in human U937 cells.
PubMed 22. Enteropathogenic Escherichia coli induced apoptosis in T84 intestinal epithelial cells via induction of caspases-3, -8, and -9.
PubMed 23. characterization of the caspase 9 signaling cascade; data provide novel insights into the ordering of a caspase signaling network downstream of caspase-9 in intact cells during apoptosis
PubMed 24. the induction of apoptosis through the inhibition of endogenous FGF signaling is caspase-9 pathway- dependent
PubMed 25. Arg(10) in the D domain of caspase-9 interacts with Asp(160) in the TTCD motif of ERK2. Differences in the TTCD motif in other MAPK family members could account for the selective recognition of caspase-9 by ERK1/2
PubMed 26. Results indicate that miR-1 and miR-133 are involved in regulating cell fate, and that post-transcriptional repression of HSP60 and HSP70 by miR-1 and of caspase-9 by miR-133 contributes significantly to their opposing actions.
PubMed 27. Observational study of gene-disease association. (HuGE Navigator)
PubMed 28. Observational study of gene-environment interaction and pharmacogenomic / toxicogenomic. (HuGE Navigator)
PubMed 29. a caspase-9 signaling cascade induces feedback disruption of the mitochondrion through cleavage of anti-apoptotic Bcl-2, Bcl-xL, and Mcl-1
PubMed 30. Bortezomib induced apoptosis of EBV lymphoblastoid cell lines (LCLs) by inducing cleavage of caspases 8 and 9
PubMed 31. RGDS directly binds and activates caspases 8 and 9, inhibits chemotaxis, and induces apoptosis of HUVECs with a mechanism independent from its antiadhesive effect.
PubMed 32. caspase-3, -8, and -9 activity is enhanced by safrole oxidase in lung cancer cells
PubMed 33. results suggest that ML-IAP might regulate apoptosis by sequestering Smac and preventing it from antagonizing XIAP-mediated inhibition of caspases, rather than by direct inhibition of caspases
PubMed 34. ILP2 is an unstable protein, and cannot inhibit caspase 9 in a physiological way on its own; possibly ILP2 requires assistance from unidentified cellular factors to be an effective inhibitor of apoptosis in vivo
PubMed 35. These results provide evidence for a novel type 1 IFN-mediated pathway that regulates apoptosis of T cells through a mitochondrial-dependent and caspase-dependent and independent pathway.
PubMed 36. caspase-9 redistribution is a regulated process and requires the activity of a caspase other than the caspase-9- this is required to control the activity of caspase-9
PubMed 37. AMF regulates expression of Apaf-1 and caspase-9 genes via a complex signaling pathway and indirectly regulates formation of the apoptosome.
PubMed 38. Results suggest that CASP-9 promoter polymorphisms affect CASP-9 expression and contribute to genetic susceptibility to lung cancer.
PubMed 39. Caspase-9-deficient cells reveal strongly impaired apoptosis, caspase activation, and mitochondrial membrane depolarization upon CD95 triggering.
PubMed 40. Data suggest that the expression levels of caspase 9 or caspase 9S do not play a major role in determining vulnerability to apoptosis in human astrocytoma cells.
PubMed 41. the antiapoptotic property of Hualpha-Syn in neuronal cell lines is associated with the attenuation of caspase-3 activity without affecting the caspase-9 activity
PubMed 42. processing and activation upon dsRNA-dependent protein kinase expression
PubMed 43. OGG1 targeted to mitochondria reduces the activation of caspase-9
PubMed 44. Caspase-9 is not only required for DeltaPsi(M) loss but also for caspase-2 activation, suggesting that these two events are downstream of the apoptosome
PubMed 45. inhibition of caspase-9 activity represents another mechanism of acquired cisplatin resistance
PubMed 46. CASP 9 by itself can activate caspase 7 in the absence of the caspase 3-dependent pathway in TNF-alpha-induced apoptosis
PubMed 47. S-nitrosation regulates activation of endogenous procaspase-9 in HT-29 cells
PubMed 48. Pro-CASP9 moved from the nucleus to the mitochondria of U937 cells during TPA-induced differentiation.
PubMed 49. Dopamine[DA] neurons were labeled and transduced with dominant negative Casp9. Progressive DA neuron lesion was induced by striatal 6-OHDA injection.Inhibiting apoptosis at caspase-9 is protective in vitro, but not in vivo.
PubMed 50. procaspase-9 is dimerized and processed by redox stress in mitochondria
PubMed 51. TGF-beta is involved in the physiological loss of gastric epithelial cells by activating apoptosis mediated by Smad7, Bim, and caspase-9
PubMed 52. Caspase-9 is activated in oxidized low-density lipoprotein (ox-LDL) induces apoptosis in endothelial cells.
PubMed 53. These data suggest that increased proneness to caspase activation in lymphocytes could reflect an ongoing systemic response in neurodegenerative disease with pathogenetic implications.
PubMed 54. caspase-9 is activated by reactive oxygen species (ROS) without involvement of cytochrome c release in hypoxic injury
PubMed 55. Protein kinase A regulates caspase-9 activation by Apaf-1 downstream of cytochrome c
PubMed 56. phosphorylation of caspase-9 at Thr125 sets the threshold for activation of the intrinsic apoptotic pathway during the cell cycle
PubMed 57. Down-regulation of caspase-9 is involved during serum-factor dependent phagocytosis of platelets by monocytes.
PubMed 58. A novel human caspase-9 splice variant containing only the CARD domain was cloned.
PubMed 59. Endogenously expressed XIAP bound active forms of both caspase-9 and caspase-3. However, downregulation of XIAP were unable to induce caspase-9 activity, indicating that it is not a major determinant in blocking caspase-9 in NSCLC cells.
PubMed 60. Results demonstrate that cleavage by caspase 3 does not activate caspase 9, but enhances apoptosis by alleviating XIAP inhibition of the apical caspase.
PubMed 61. regulation of alternative splicing in lung adenocarcinoma cells by de novo ceramide
PubMed 62. caspase-9 binds to NAIP in an ATP-dependent manner
PubMed 63. activation by an alternative mechanism virally infected cells beside the well characterized pathways via death receptors or mitochondrial cytochrome c release
PubMed 64. Presentation of nitric oxide regulates monocyte survival through effects on this enzyme and caspase-3 activation.
PubMed 65. caspase 9 acts as a focal point for multiple protein kinase signaling pathways that regulate apoptosis
PubMed 66. These results indicate that resveratrol seems to exert its growth-inhibitory/apoptotic effect on the breast cancer cell line MCF7 via the Akt-caspase-9 pathway.
PubMed 67. caspase-9 activation in human disease can play a prominent role in localized cellular degenerative processes without causing nuclear or cell death.
PubMed 68. Low-dose 5-aza-2'-deoxycytidine (DAC) induced enhancement of apoptosis mediated by Adenovirus-p53 infection, and ectopic overexpression of procaspase-9.
PubMed 69. required for Parvovirus B19 virus-induced apoptosis in primary hepatocytes and hepatocellular carcinoma cell line HepG2
PubMed 70. Adenovirus encoding HIV-1 Vpr activates caspase 9 and induces apoptotic cell death in both p53 positive and negative human tumor cell lines.
PubMed 71. identified SRp30a as an RNA trans-acting factor that functions as a major regulator of caspase-9 pre-mRNA processing and is required for ceramide to mediate the alternative splicing of caspase-9
PubMed 72. Blood values increased in untreated Parkinson disease patientes.
PubMed 73. These data indicate that the caspase-9 gene is rarely mutated in gastric, colorectal and lung adenocarcinomas, and suggest that caspase-9 gene mutation may not contribute to the pathogenesis of these cancers.
PubMed 74. caspase-3 and caspase-9 activation has critical roles in hypoxia/reoxygenation induced apoptosis
PubMed 75. caspases-3 and caspase-9 play novel roles in transcription by regulating polycomb protein function through direct cleaving of Ring1B.
PubMed 76. single amino acid substitutions at the dimer interface abrogate the activity of caspases-8 and -9
PubMed 77. Role for caspase-9 mediated cleavage of Raf-1 in the negative feedback regulation of hematopoietic cell apoptosis induced by growth factor withdrawal.
PubMed 78. BCR-signal causes Bax translocation, followed by mitochondrial depolarization, and cytC release; subsequent caspase-9 activation can account for events further downstream
PubMed 79. Thrombin is able to induce activation of caspases 3 and 9 in human platelets and significantly increases the amount in the cytoskeleton of the active forms of both caspases and the procaspases 3 and 9.
PubMed 80. Caspase-9 at chromosome 1 reveal rare allelic variants in neuroblastoma tumors
PubMed 81. aggregation of multiple procaspase-9 molecules can induce their activation independent of the apoptosome
PubMed 82. Apollon binds to, ubiquitinates and facilitates proteasomal degradation of SMAC and caspase-9, results suggesting that Apollon has an essential function in preventing SMAC-induced apoptosis
PubMed 83. blocks apocytochrome c activation and Bax-induced apoptosis
PubMed 84. Gossypol induced complete cytochrome c release from mitochondria amd increased caspases-3 and -9 activity in large cell lymphoma cells.
PubMed 85. BMPs promote apoptotic cell death in normal human pulmonary artery smooth muscle cells (PASMCs) by activation of caspases-3, -8, and -9, cytochrome c release, and downregulation of Bcl-2
PubMed 86. Activation of caspase-9 is required for UV-induced apoptosis of human keratinocytes
PubMed 87. caspase 9 is not critical for ultraviolet ray-induced apoptosis in tumor cells
PubMed 88. the functional apoptosome complex in apoptotic cells consists primarily of Apaf-1 and processed caspase-9
PubMed 89. Smac-induced apoptosis proceeds via a pathway mediated by caspase-9 that can be inhibited by zLEHD-fmk and overexpression of XIAP protein.
PubMed 90. caspase-9 autoprocessing is regulated by c-Abl in the apoptotic response to genotoxic stress.

[Top][Help]HIV-1 protein interactions

Protein    Interaction
1. Envelope surface glycoprotein gp120 The interaction of cell-associated HIV-1 gp120 with CXCR4-expressing target cells triggers apoptotic processes by activating caspase-9 and -3 PubMed
2. Nef Microarray analyses have shown HIV-1 Nef-induced upregulation of caspase-9 in primary human brain microvascular endothelial cells PubMed
3. Vpr Overproduction of EEF2 blocks HIV-1 Vpr-induced cell death both in fission yeast and human cells, suppresses caspase 9 and caspase 3-mediated apoptosis induced by Vpr, and reduces cytochrome c release induced by Vpr PubMed
4. HIV-1 Vpr-induced apoptosis through caspase activation and Smac release from mitochondria is dependent on G2 cell cycle arrest , but is lost in cells synchronized in G1/S PubMed
5. HIV-1 Vpr induces apoptosis through activation of caspase 9 as well as by increasing the overall expression level of caspase 9 PubMed
6. retropepsin HIV-1 protease directly cleaves and activates procaspase 8 in T cells which is associated with cleavage of BID, mitochondrial release of cytochrome c, activation of the downstream caspases 9 and 3, and cleavage of DFF and PARP PubMed

Go to the HIV-1, Human Protein Interaction Database

[Top][Help]Interactions

Description ..........
  Product Interactant Other Gene Complex Source Pubs          
 
  NP_001220.2   NP_005148.1   ABL1      HPRD    PubMed
 
  NP_001220.2   APAF1   APAF1      HPRD    PubMed
 
  NP_001220.2   NP_863651.1   APAF1      HPRD    PubMed
APAF1 interacts with CASP9.
  NP_001220.2   NP_863651.1   APAF1      BIND    PubMed
APAF1 interacts with CASP9.
  NP_001220.2   NP_863658.1   APAF1      BIND    PubMed
 
  NP_001220.2   BCL10   BCL10      HPRD    PubMed
 
  NP_001220.2   BCLX   BCL2L1      HPRD    PubMed
 
  NP_001220.2   Apoptosis inhibitor 1   BIRC2      HPRD    PubMed
 
  NP_001220.2   HIAP2   BIRC2      HPRD    PubMed
 
  NP_001220.2   Baculoviral IAP repeat containing protein 3   BIRC3      HPRD    PubMed
 
  NP_001220.2   Survivin   BIRC5      HPRD    PubMed
 
  NP_001220.2   NP_057336.1   BIRC6      HPRD    PubMed
Apollon interacts with and ubiquitinates Caspase-9.
  NP_001220.2   NP_057336.1   BIRC6      BIND    PubMed
 
  NP_001220.2   Baculoviral IAP repeat containing protein 7   BIRC7      HPRD    PubMed
 
  NP_001220.2   NP_203127.3   BIRC8      HPRD    PubMed
 
  NP_001220.2   NP_055774.1   CARD8      HPRD    PubMed
 
  NP_001220.2   NP_116759.2   CASP10      HPRD    PubMed
 
  NP_001220.2   NP_004337.2   CASP3      HPRD    PubMed
 
  NP_001220.2   NP_001220.2   CASP9      HPRD    PubMed
 
  NP_001220.2   Cytochrome C   CYCS      HPRD    PubMed
 
  NP_001220.2   DCC   DCC      HPRD    PubMed
 
  NP_001220.2   NP_004406.1   DSP      HPRD    PubMed
 
  NP_001220.2   NP_004122.1   GZMB      HPRD    PubMed
 
  NP_001220.2   NP_002147.2   HSPD1      HPRD    PubMed
 
  NP_001220.2   NP_002736.2   MAPK1      HPRD    PubMed
 
  NP_001220.2   NP_002737.1   MAPK3      HPRD    PubMed
 
  NP_001220.2   NP_057543.1   MGC29506      HPRD    PubMed
 
  NP_001220.2   NP_004527.1   NAIP      HPRD    PubMed
 
  NP_001220.2   NACHT, LRR and PYD containing protein 1   NLRP1      HPRD    PubMed
 
  NP_001220.2   NOD1   NOD1      HPRD    PubMed
Nod1 interacts with and regulates Caspase-9
  NP_001220.2   NP_006083.1   NOD1      BIND    PubMed
CASP9 (caspase-9) cleaves RB-1 (hRB) at the LEND consensus site to produce the p76 form.
  NP_001220.2   NP_000312.1   RB1      BIND    PubMed
 
  NP_001220.2   Apoptosis inhibitor 3   XIAP      HPRD    PubMed
 
  NP_001220.2   Apoptosis inhibitor 3   XIAP      HPRD    PubMed
XIAP interacts with and ubiquitinates Caspase-9.
  NP_001220.2   NP_001158.2   XIAP      BIND    PubMed
 
  NP_001220.2   PACAP        HPRD    PubMed
Affinity Capture-Western; Reconstituted Complex
  BioGRID:107292   BioGRID:106814   APAF1      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107292   BioGRID:107070   BCL2L1      BioGRID    PubMed
Affinity Capture-Western; Reconstituted Complex
  BioGRID:107292   BioGRID:106826   BIRC2      BioGRID    PubMed
Affinity Capture-Western; Reconstituted Complex
  BioGRID:107292   BioGRID:106827   BIRC3      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107292   BioGRID:106829   BIRC5      BioGRID    PubMed
BRUCE interacts with Casp-9. This interaction was modeled on a demonstrated interaction between mouse BRUCE and human Casp-9.
     NP_057336.1   BIRC6      BIND    PubMed
Affinity Capture-Western
  BioGRID:107292   BioGRID:122670   BIRC7      BioGRID    PubMed
Reconstituted Complex
  BioGRID:107292   BioGRID:125186   BIRC8      BioGRID    PubMed
Biochemical Activity
  BioGRID:107292   BioGRID:107293   CASP10      BioGRID    PubMed
Phenotypic Suppression
  BioGRID:107292   BioGRID:107285   CASP2      BioGRID    PubMed
Biochemical Activity; Phenotypic Suppression
  BioGRID:107292   BioGRID:107291   CASP8      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107292   BioGRID:107998   DCC      BioGRID    PubMed
Biochemical Activity
  BioGRID:107292   BioGRID:111580   MAPK1      BioGRID    PubMed
Far Western
  BioGRID:107292   BioGRID:110752   NAIP      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107292   BioGRID:116529   NLRP1      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107292   BioGRID:115664   NOD1      BioGRID    PubMed
Affinity Capture-Western; Far Western; Reconstituted Complex; Two-hybrid
  BioGRID:107292   BioGRID:106828   XIAP      BioGRID    PubMed

[Top][Help]General gene information

Markers

SHGC-7118(e-PCR)
Links: UniSTS:17174
CASP9_492(e-PCR)
Links: UniSTS:277053
G67485(e-PCR)
Links: UniSTS:186696
G67486(e-PCR)
Links: UniSTS:186697
G67487(e-PCR)
Links: UniSTS:186698
G67488(e-PCR)
Links: UniSTS:186699
G67489(e-PCR)
Links: UniSTS:186700
csnpcasp9-pcr4-1(e-PCR)
Links: UniSTS:243023
csnpcasp9-pcr6-1(e-PCR)
Links: UniSTS:243024
SHGC-36104(e-PCR)
Links: UniSTS:17033
SHGC-74255(e-PCR)
Links: UniSTS:61340
SHGC-52575(e-PCR)
Links: UniSTS:34251
RH67819(e-PCR)
Links: UniSTS:30169

Homology

Homologs of the CASP9 gene The CASP9 gene is conserved in chimpanzee, dog, cow, mouse, rat, and zebrafish.


Map Viewer (Mouse, Rat)

Pathways

KEGG pathway: Alzheimer's disease
05010
KEGG pathway: Amyotrophic lateral sclerosis (ALS)
05014
KEGG pathway: Apoptosis
04210
KEGG pathway: Colorectal cancer
05210
KEGG pathway: Endometrial cancer
05213
KEGG pathway: Huntington's disease
05016
KEGG pathway: Non-small cell lung cancer
05223
KEGG pathway: Pancreatic cancer
05212
KEGG pathway: Parkinson's disease
05012
KEGG pathway: Pathways in cancer
05200
KEGG pathway: Prostate cancer
05215
KEGG pathway: Small cell lung cancer
05222
KEGG pathway: VEGF signaling pathway
04370
KEGG pathway: p53 signaling pathway
04115
Reactome Event:Apoptosis
REACT_578
Reactome Event:Signalling by NGF
REACT_11061

[Top][Help]General protein information

Preferred Names
caspase 9
Names
caspase 9
apoptotic protease MCH-6
ICE-like apoptotic protease 6
apoptotic protease activating factor 3
caspase 9, apoptosis-related cysteine protease
NP_001220.2
EC 3.4.22.62
NP_127463.1
EC 3.4.22.62

[Top][Help]NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

mRNA and Protein(s)

  1. NM_001229.2NP_001220.2  caspase 9 isoform alpha preproprotein

    Description
    Transcript Variant: This variant (alpha) represents the longer transcript and encodes the longer isoform (alpha).
    Source sequence(s)
    BC006463
    Consensus CDS
    CCDS158.1
    UniProtKB/Swiss-Prot
    P55211
    UniProtKB/TrEMBL
    Q53Y70
    Conserved Domains (2) summary
    cd00032
    Location:152414
    Blast Score: 736
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide...
    cl02470
    Location:191
    Blast Score: 200
    CARD; Caspase recruitment domain
  2. NM_032996.1NP_127463.1  caspase 9 isoform beta preproprotein

    Description
    Transcript Variant: This variant (beta) lacks several exons in the coding region but maintains the reading frame, compared to variant alpha. It encodes isoform beta which is shorter than isoform alpha. Isoform beta lacks protease activity and acts as an apoptosis inhibitor.
    Source sequence(s)
    AB015653,BC006463
    Consensus CDS
    CCDS159.1
    UniProtKB/Swiss-Prot
    P55211
    UniProtKB/TrEMBL
    Q5JRU9
    Conserved Domains (2) summary
    cl00042
    Location:140264
    Blast Score: 289
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide...
    cl02470
    Location:191
    Blast Score: 196
    CARD; Caspase recruitment domain

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Genome Reference Consortium Human Build 37 (GRCh37), Primary_Assembly

Genomic

  1. NC_000001.10

    Range
    15818790..15850789, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NT_004610.19 

    Range
    2498878..2530877, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (Celera)

Genomic

  1. AC_000044.1

    Range
    14301660..14333661, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_925794.1 

    Range
    2127256..2159257, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (HuRef)

Genomic

  1. AC_000133.1

    Range
    14338282..14370285
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_001838564.2 

    Range
    1004099..1036102
    Download
    GenBank FASTA Sequence Viewer (Graphics)

[Top][Help]Related Sequences

  Nucleotide   Protein
  genomic   AB019205.2   BAA82697.1
  genomic   AL512883.5   CAC42423.1
       CAI12971.1
       CAI12972.1
       CAI12973.1
       CAI12974.1
  genomic   AY214168.1   AAO21133.1
  genomic   CH471167.1   EAW51730.1
       EAW51731.1
  mRNA   AB015653.1   BAA78780.1
  mRNA   AB020979.1   BAA87905.1
  mRNA   AB209147.1   BAD92384.1
  mRNA   AF093130.1   AAD12248.1
  mRNA   AF110376.1   AAD13615.1
  mRNA   AJ781267.1   CAH03131.1
  mRNA   AK292080.1   BAF84769.1
  mRNA   AK292111.1   BAF84800.1
  mRNA   AK303743.1   BAG64715.1
  mRNA   AY732490.2   AAV33129.1
  mRNA   BC002452.2   AAH02452.1
  mRNA   BC006463.1   AAH06463.1
  mRNA   BT006911.1   AAP35557.1
  mRNA   CR597028.1   None
  mRNA   CR613097.1   None
  mRNA   U56390.1   AAC50640.1
  mRNA   U60521.1   AAC50776.1
  other-genetic   DQ891693.2   ABM82619.1
Protein Accession   Links
P55211.3   GenPept   UniProtKB/Swiss-Prot:P55211
Q53Y70   GenPept   UniProtKB/TrEMBL:Q53Y70
Q59GG2   GenPept   UniProtKB/TrEMBL:Q59GG2
Q5JRU2   GenPept   UniProtKB/TrEMBL:Q5JRU2
Q5JRU8   GenPept   UniProtKB/TrEMBL:Q5JRU8
Q5JRU9   GenPept   UniProtKB/TrEMBL:Q5JRU9
Q5UGI1   GenPept   UniProtKB/TrEMBL:Q5UGI1
Q6EV95   GenPept   UniProtKB/TrEMBL:Q6EV95

[Top][Help]Additional Links

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.