A peptide inhibitor of HIV-1 assembly in vitro

Nat Struct Mol Biol. 2005 Aug;12(8):671-7. doi: 10.1038/nsmb964. Epub 2005 Jul 24.

Abstract

Formation of infectious HIV-1 involves assembly of Gag polyproteins into immature particles and subsequent assembly of mature capsids after proteolytic disassembly of the Gag shell. We report a 12-mer peptide, capsid assembly inhibitor (CAI), that binds the capsid (CA) domain of Gag and inhibits assembly of immature- and mature-like capsid particles in vitro. CAI was identified by phage display screening among a group of peptides with similar sequences that bind to a single reactive site in CA. Its binding site was mapped to CA residues 169-191, with an additional contribution from the last helix of CA. This result was confirmed by a separate X-ray structure analysis showing that CAI inserts into a conserved hydrophobic groove and alters the CA dimer interface. The CAI binding site is a new target for antiviral development, and CAI is the first known inhibitor directed against assembly of immature HIV-1.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Antiviral Agents / genetics
  • Antiviral Agents / metabolism*
  • Binding Sites
  • Capsid / physiology*
  • Capsid / ultrastructure
  • Capsid Proteins / genetics
  • Capsid Proteins / metabolism*
  • Enzyme-Linked Immunosorbent Assay
  • Gene Products, gag / genetics
  • Gene Products, gag / metabolism*
  • HIV-1 / physiology*
  • Microscopy, Electron
  • Models, Molecular
  • Molecular Sequence Data
  • Nuclear Magnetic Resonance, Biomolecular
  • Peptide Library
  • Peptides / genetics
  • Peptides / metabolism*
  • Virus Assembly / physiology*

Substances

  • Antiviral Agents
  • Capsid Proteins
  • Gene Products, gag
  • Peptide Library
  • Peptides