Department of Computer Science and Information Engineering, National Taiwan University Taipei 106, Taiwan. jsyeh@cmlab.csie.ntu.edu.tw
SUMMARY: A web-based three-dimensional (3D) protein retrieval system is available for protein structure data including all PDB and FSSP dataset. In this system, we use a visual-based matching method to compare the protein structure from multiple viewpoints. It takes less than three seconds for each query with 90% accuracy on an average.