PubMed

FBA-SimVis: interactive visualization of constraint-based metabolic models.

Grafahrend-Belau E, Klukas C, Junker BH, Schreiber F.

Bioinformatics. 2009 Oct 15;25(20):2755-7. Epub 2009 Jul 3.PMID: 19578041 [PubMed - in process]Related articlesFree article

Flux balance analysis of barley seeds: a computational approach to study systemic properties of central metabolism.

Grafahrend-Belau E, Schreiber F, Koschützki D, Junker BH.

Plant Physiol. 2009 Jan;149(1):585-98. Epub 2008 Nov 5.PMID: 18987214 [PubMed - indexed for MEDLINE]Related articles

Modularization of biochemical networks based on classification of Petri net t-invariants.

Grafahrend-Belau E, Schreiber F, Heiner M, Sackmann A, Junker BH, Grunwald S, Speer A, Winder K, Koch I.

BMC Bioinformatics. 2008 Feb 8;9:90.PMID: 18257938 [PubMed - indexed for MEDLINE]Related articlesFree article

MetaCrop: a detailed database of crop plant metabolism.

Grafahrend-Belau E, Weise S, Koschützki D, Scholz U, Junker BH, Schreiber F.

Nucleic Acids Res. 2008 Jan;36(Database issue):D954-8. Epub 2007 Oct 11.PMID: 17933764 [PubMed - indexed for MEDLINE]Related articlesFree article

Parallel determination of enzyme activities and in vivo fluxes in Brassica napus embryos grown on organic or inorganic nitrogen source.

Junker BH, Lonien J, Heady LE, Rogers A, Schwender J.

Phytochemistry. 2007 Aug-Sep;68(16-18):2232-42. Epub 2007 May 16.PMID: 17509628 [PubMed - indexed for MEDLINE]Related articles

Meta-All: a system for managing metabolic pathway information.

Weise S, Grosse I, Klukas C, Koschützki D, Scholz U, Schreiber F, Junker BH.

BMC Bioinformatics. 2006 Oct 23;7:465.PMID: 17059592 [PubMed - indexed for MEDLINE]Related articlesFree article

Bioprocess monitoring and computer control: key roots of the current PAT initiative.

Junker BH, Wang HY.

Biotechnol Bioeng. 2006 Oct 5;95(2):226-61. Review.PMID: 16933288 [PubMed - indexed for MEDLINE]Related articles

Exploration of biological network centralities with CentiBiN.

Junker BH, Koschützki D, Schreiber F.

BMC Bioinformatics. 2006 Apr 21;7:219.PMID: 16630347 [PubMed - indexed for MEDLINE]Related articlesFree article

VANTED: a system for advanced data analysis and visualization in the context of biological networks.

Junker BH, Klukas C, Schreiber F.

BMC Bioinformatics. 2006 Mar 6;7:109.PMID: 16519817 [PubMed - indexed for MEDLINE]Related articlesFree article

Enhancing vacuolar sucrose cleavage within the developing potato tuber has only minor effects on metabolism.

Junker BH, Wuttke R, Nunes-Nesi A, Steinhauser D, Schauer N, Büssis D, Willmitzer L, Fernie AR.

Plant Cell Physiol. 2006 Feb;47(2):277-89. Epub 2005 Dec 22.PMID: 16373380 [PubMed - indexed for MEDLINE]Related articles

Scale-up methodologies for Escherichia coli and yeast fermentation processes.

Junker BH.

J Biosci Bioeng. 2004;97(6):347-64.PMID: 16233642 [PubMed]Related articlesFree article

Temporally regulated expression of a yeast invertase in potato tubers allows dissection of the complex metabolic phenotype obtained following its constitutive expression.

Junker BH, Wuttke R, Tiessen A, Geigenberger P, Sonnewald U, Willmitzer L, Fernie AR.

Plant Mol Biol. 2004 Sep;56(1):91-110.PMID: 15604730 [PubMed - indexed for MEDLINE]Related articles

Early phase process scale-up challenges for fungal and filamentous bacterial cultures.

Junker BH, Hesse M, Burgess B, Masurekar P, Connors N, Seeley A.

Appl Biochem Biotechnol. 2004 Dec;119(3):241-78. Review.PMID: 15591617 [PubMed - indexed for MEDLINE]Related articles

Application of Petri net theory for modelling and validation of the sucrose breakdown pathway in the potato tuber.

Koch I, Junker BH, Heiner M.

Bioinformatics. 2005 Apr 1;21(7):1219-26. Epub 2004 Nov 16.PMID: 15546934 [PubMed - indexed for MEDLINE]Related articlesFree article

Hypothesis-driven approach to predict transcriptional units from gene expression data.

Steinhauser D, Junker BH, Luedemann A, Selbig J, Kopka J.

Bioinformatics. 2004 Aug 12;20(12):1928-39. Epub 2004 Mar 25.PMID: 15044239 [PubMed - indexed for MEDLINE]Related articlesFree article

In plants the alc gene expression system responds more rapidly following induction with acetaldehyde than with ethanol.

Junker BH, Chu C, Sonnewald U, Willmitzer L, Fernie AR.

FEBS Lett. 2003 Jan 30;535(1-3):136-40.PMID: 12560092 [PubMed - indexed for MEDLINE]Related articles

Use of glucose feeding to produce concentrated yeast cells.

Junker BH, Mann Z, Seeley A, Zhang J, Greasham R.

Appl Biochem Biotechnol. 2002 Feb;97(2):63-78.PMID: 11996225 [PubMed - indexed for MEDLINE]Related articles

Accumulation of the PhaP phasin of Ralstonia eutropha is dependent on production of polyhydroxybutyrate in cells.

York GM, Junker BH, Stubbe JA, Sinskey AJ.

J Bacteriol. 2001 Jul;183(14):4217-26.PMID: 11418562 [PubMed - indexed for MEDLINE]Related articlesFree article

Retrofit of CD-6 (Smith) impeller in fermentation vessels.

Junker BH, Mann Z, Hunt G.

Appl Biochem Biotechnol. 2000 Oct;89(1):67-83.PMID: 11069009 [PubMed - indexed for MEDLINE]Related articles

Sterilization-in-place of concentrated nutrient solutions

Junker BH, Beshty B, Wilson J.

Biotechnol Bioeng. 1999 Mar 5;62(5):501-8.PMID: 10099558 [PubMed - as supplied by publisher]Related articles