PubMed

Assessment of current status of zinc in wastewater treatment plants to set effluent standards for protecting aquatic organisms in Japan.

Yamagata H, Yoshizawa M, Minamiyama M.

Environ Monit Assess. 2009 Sep 16. [Epub ahead of print]PMID: 19757119 [PubMed - as supplied by publisher]Related articles

Comparative analysis of complete orthologous centromeres from two subspecies of rice reveals rapid variation of centromere organization and structure.

Wu J, Fujisawa M, Tian Z, Yamagata H, Kamiya K, Shibata M, Hosokawa S, Ito Y, Hamada M, Katagiri S, Kurita K, Yamamoto M, Kikuta A, Machita K, Karasawa W, Kanamori H, Namiki N, Mizuno H, Ma J, Sasaki T, Matsumoto T.

Plant J. 2009 Aug 21. [Epub ahead of print]PMID: 19702669 [PubMed - as supplied by publisher]Related articles

Requirement of voltage-dependent anion channel 2 for pro-apoptotic activity of Bax.

Yamagata H, Shimizu S, Nishida Y, Watanabe Y, Craigen WJ, Tsujimoto Y.

Oncogene. 2009 Oct 8;28(40):3563-72. Epub 2009 Jul 20.PMID: 19617898 [PubMed - indexed for MEDLINE]Related articles

Further evaluation of the localization and functionality of hemagglutinin epitope- and fluorescent protein-tagged AtMinD1 in Arabidopsis thaliana.

Fujiwara MT, Li D, Kazama Y, Abe T, Uno T, Yamagata H, Kanamaru K, Itoh RD.

Biosci Biotechnol Biochem. 2009 Jul;73(7):1693-7. Epub 2009 Jul 7.PMID: 19584524 [PubMed - in process]Related articlesFree article

Colonoscopy with a transparent hood: simple technique for improved quality of colonoscopy.

Matsushita M, Yamagata H, Wakamatsu T, Danbara N, Kawamata S, Omiya M, Okazaki K.

Am J Gastroenterol. 2009 Feb;104(2):527. Epub 2009 Jan 13. No abstract available. PMID: 19174800 [PubMed - indexed for MEDLINE]Related articles

Computer-aided detection of lung nodules on multidetector row computed tomography using three-dimensional analysis of nodule candidates and their surroundings.

Matsumoto S, Ohno Y, Yamagata H, Takenaka D, Sugimura K.

Radiat Med. 2008 Nov;26(9):562-9. Epub 2008 Nov 22. Erratum in: Radiat Med. 2009 Apr;27(3):161. PMID: 19030967 [PubMed - indexed for MEDLINE]Related articles

Cyclic GMP acts as a common regulator for the transcriptional activation of the flavonoid biosynthetic pathway in soybean.

Suita K, Kiryu T, Sawada M, Mitsui M, Nakagawa M, Kanamaru K, Yamagata H.

Planta. 2009 Jan;229(2):403-13. Epub 2008 Nov 6.PMID: 18987879 [PubMed - indexed for MEDLINE]Related articles

Biochemical characterization of rab proteins from Bombyx mori.

Uno T, Moriwaki T, Nakamura M, Matsubara M, Yamagata H, Kanamaru K, Takagi M.

Arch Insect Biochem Physiol. 2009 Feb;70(2):77-89.PMID: 18949803 [PubMed - indexed for MEDLINE]Related articles

The role of group bulkiness in the catalytic activity of psychrophile cold-active protein tyrosine phosphatase.

Tsuruta H, Mikami B, Yamamoto C, Yamagata H.

FEBS J. 2008 Sep;275(17):4317-28. Epub 2008 Jul 18.PMID: 18647345 [PubMed - indexed for MEDLINE]Related articles

Congenital bronchobiliary fistula in a 65-year-old woman.

Uramoto H, Kawano O, Sugimoto M, Yamagata H, Kohrogi H.

Intern Med. 2008;47(14):1367-70. Epub 2008 Jul 15.PMID: 18628589 [PubMed - indexed for MEDLINE]Related articlesFree article

Linear mucosal defect may be characteristic of lansoprazole-associated collagenous colitis.

Umeno J, Matsumoto T, Nakamura S, Jo Y, Yada S, Hirakawa K, Yoshimura R, Yamagata H, Kudo T, Hirano A, Gushima M, Yao T, Nakashima Y, Iida M.

Gastrointest Endosc. 2008 Jun;67(7):1185-91.PMID: 18513560 [PubMed - indexed for MEDLINE]Related articles

Patients with pulmonary tuberculosis are frequently positive for anti-cyclic citrullinated peptide antibodies, but their sera also react with unmodified arginine-containing peptide.

Kakumanu P, Yamagata H, Sobel ES, Reeves WH, Chan EK, Satoh M.

Arthritis Rheum. 2008 Jun;58(6):1576-81.PMID: 18512773 [PubMed - indexed for MEDLINE]Related articlesFree article

Involvement of Smad3 phosphoisoform-mediated signaling in the development of colonic cancer in IL-10-deficient mice.

Hachimine D, Uchida K, Asada M, Nishio A, Kawamata S, Sekimoto G, Murata M, Yamagata H, Yoshida K, Mori S, Tahashi Y, Matsuzaki K, Okazaki K.

Int J Oncol. 2008 Jun;32(6):1221-6.PMID: 18497983 [PubMed - indexed for MEDLINE]Related articles

Evaluating a leadership program: a comparative, longitudinal study to assess the impact of the Executive Leadership in Academic Medicine (ELAM) Program for Women.

Dannels SA, Yamagata H, McDade SA, Chuang YC, Gleason KA, McLaughlin JM, Richman RC, Morahan PS.

Acad Med. 2008 May;83(5):488-95.PMID: 18448904 [PubMed - indexed for MEDLINE]Related articles

Heat island mitigation using water retentive pavement sprinkled with reclaimed wastewater.

Yamagata H, Nasu M, Yoshizawa M, Miyamoto A, Minamiyama M.

Water Sci Technol. 2008;57(5):763-71.PMID: 18401150 [PubMed - indexed for MEDLINE]Related articles

Mutagenesis of uracil-DNA glycosylase deficient mutants of the extremely thermophilic eubacterium Thermus thermophilus.

Sakai T, Tokishita S, Mochizuki K, Motomiya A, Yamagata H, Ohta T.

DNA Repair (Amst). 2008 Apr 2;7(4):663-9. Epub 2008 Mar 4.PMID: 18296128 [PubMed - in process]Related articles

Bioconversion by functional P450 1A9 and P450 1C1 of Anguilla japonica.

Uno T, Okamoto S, Masuda S, Imaishi H, Nakamura M, Kanamaru K, Yamagata H, El-Kady MA, Kaminishi Y, Itakura T.

Comp Biochem Physiol C Toxicol Pharmacol. 2008 Apr;147(3):278-85. Epub 2007 Nov 24.PMID: 18243059 [PubMed - indexed for MEDLINE]Related articles

Dynamin 2 gene is a novel susceptibility gene for late-onset Alzheimer disease in non-APOE-epsilon4 carriers.

Aidaralieva NJ, Kamino K, Kimura R, Yamamoto M, Morihara T, Kazui H, Hashimoto R, Tanaka T, Kudo T, Kida T, Okuda J, Uema T, Yamagata H, Miki T, Akatsu H, Kosaka K, Takeda M.

J Hum Genet. 2008;53(4):296-302. Epub 2008 Jan 31.PMID: 18236001 [PubMed - indexed for MEDLINE]Related articles

Management of chemical substances in a water environment communicating among stakeholders.

Yamagata H, Saino H, Suzuki H, Kobayashi H, Minamiyama M, Fujita K, Sakai K, Takahashi M.

Water Sci Technol. 2008;57(1):109-16.PMID: 18192747 [PubMed - indexed for MEDLINE]Related articles

Bioconversion of small molecules by cytochrome P450 species expressed in Escherichia coli.

Uno T, Okamoto S, Masuda S, Itoh A, Uno Y, Nakamura M, Kanamaru K, Yamagata H, Imaishi H.

Biotechnol Appl Biochem. 2008 Aug;50(Pt 4):165-71.PMID: 18052937 [PubMed - indexed for MEDLINE]Related articles

Gene organization in rice revealed by full-length cDNA mapping and gene expression analysis through microarray.

Satoh K, Doi K, Nagata T, Kishimoto N, Suzuki K, Otomo Y, Kawai J, Nakamura M, Hirozane-Kishikawa T, Kanagawa S, Arakawa T, Takahashi-Iida J, Murata M, Ninomiya N, Sasaki D, Fukuda S, Tagami M, Yamagata H, Kurita K, Kamiya K, Yamamoto M, Kikuta A, Bito T, Fujitsuka N, Ito K, Kanamori H, Choi IR, Nagamura Y, Matsumoto T, Murakami K, Matsubara K, Carninci P, Hayashizaki Y, Kikuchi S.

PLoS One. 2007 Nov 28;2(11):e1235.PMID: 18043742 [PubMed - indexed for MEDLINE]Related articlesFree article

Determination of phosphorylated amino acid residues of Rab8 from Bombyx mori.

Uno T, Nakada T, Okamaoto S, Nakamura M, Matsubara M, Imaishi H, Yamagata H, Kanamaru K, Takagi M.

Arch Insect Biochem Physiol. 2007 Oct;66(2):89-97.PMID: 17879235 [PubMed - indexed for MEDLINE]Related articles

Imprinting status of paternally imprinted DLX5 gene in Japanese patients with Rett syndrome.

Itaba-Matsumoto N, Maegawa S, Yamagata H, Kondo I, Oshimura M, Nanba E.

Brain Dev. 2007 Sep;29(8):491-5. Epub 2007 Mar 23.PMID: 17363207 [PubMed - indexed for MEDLINE]Related articles

Identification of homozygous deletions of tumor suppressor gene FAT in oral cancer using CGH-array.

Nakaya K, Yamagata HD, Arita N, Nakashiro KI, Nose M, Miki T, Hamakawa H.

Oncogene. 2007 Aug 9;26(36):5300-8. Epub 2007 Feb 26.PMID: 17325662 [PubMed - indexed for MEDLINE]Related articles

The DYRK1A gene, encoded in chromosome 21 Down syndrome critical region, bridges between beta-amyloid production and tau phosphorylation in Alzheimer disease.

Kimura R, Kamino K, Yamamoto M, Nuripa A, Kida T, Kazui H, Hashimoto R, Tanaka T, Kudo T, Yamagata H, Tabara Y, Miki T, Akatsu H, Kosaka K, Funakoshi E, Nishitomi K, Sakaguchi G, Kato A, Hattori H, Uema T, Takeda M.

Hum Mol Genet. 2007 Jan 1;16(1):15-23. Epub 2006 Nov 29.PMID: 17135279 [PubMed - indexed for MEDLINE]Related articlesFree article

Risk evaluation for staphylococcal food poisoning in processed milk produced with skim milk powder.

Soejima T, Nagao E, Yano Y, Yamagata H, Kagi H, Shinagawa K.

Int J Food Microbiol. 2007 Apr 1;115(1):29-34. Epub 2006 Nov 27.PMID: 17125869 [PubMed - indexed for MEDLINE]Related articles

Preoperative RFA simulation for liver cancer using a CT virtual ultrasound system.

Kudo K, Moriyasu F, Mine Y, Miyata Y, Sugimoto K, Metoki R, Kamamoto H, Suzuki S, Shimizu M, Miyahara T, Yokoi M, Horibe T, Yamagata H.

Eur J Radiol. 2007 Feb;61(2):324-31. Epub 2006 Oct 17.PMID: 17049791 [PubMed - indexed for MEDLINE]Related articles

Hypersensitivity reaction against influenza vaccine in a patient with rheumatoid arthritis after the initiation of etanercept injections.

Kato T, Kiire A, Yamagata H, Yamanaka H, Kamatani N.

Mod Rheumatol. 2006;16(5):327-9.PMID: 17039318 [PubMed - indexed for MEDLINE]Related articles

Transcriptional readthrough of Hox genes Ubx and Antp and their divergent post-transcriptional control during crustacean evolution.

Shiga Y, Sagawa K, Takai R, Sakaguchi H, Yamagata H, Hayashi S.

Evol Dev. 2006 Sep-Oct;8(5):407-14.PMID: 16925676 [PubMed - indexed for MEDLINE]Related articles

Variations in the BDNF gene in autopsy-confirmed Alzheimer's disease and dementia with Lewy bodies in Japan.

Akatsu H, Yamagata HD, Kawamata J, Kamino K, Takeda M, Yamamoto T, Miki T, Tooyama I, Shimohama S, Kosaka K.

Dement Geriatr Cogn Disord. 2006;22(3):216-22. Epub 2006 Aug 7.PMID: 16899999 [PubMed - indexed for MEDLINE]Related articles

Modification of small molecules by using cytochrome P450 expressed in Escherichia coli.

Uno T, Nakao A, Masuda S, Taniguchi Y, Kanamaru K, Yamagata H, Nakamura M, Imaishi H, Oono K.

J Ind Microbiol Biotechnol. 2006 Dec;33(12):1043-50. Epub 2006 Aug 5.PMID: 16897083 [PubMed - indexed for MEDLINE]Related articles

Comprehensive management of chemical substances in a water environment using PRTR data.

Yamagata H, Saino H, Minamiyama M, Takahashi M.

Water Sci Technol. 2006;53(11):99-106.PMID: 16862779 [PubMed - indexed for MEDLINE]Related articles

beta-Glucosidase as a reporter for the gene expression studies in Thermus thermophilus and constitutive expression of DNA repair genes.

Ohta T, Tokishita S, Imazuka R, Mori I, Okamura J, Yamagata H.

Mutagenesis. 2006 Jul;21(4):255-60. Epub 2006 Jun 15.PMID: 16777922 [PubMed - indexed for MEDLINE]Related articlesFree article

Tissue-specific expression of a bHLH-PAS protein homologous to ARNT during the development of crustacean Daphnia magna.

Tokishita S, Kimura S, Mandokora Y, Kato K, Shiga Y, Takahashi Y, Ohta T, Yamagata H.

Gene. 2006 Jul 19;376(2):231-9.PMID: 16766139 [PubMed - indexed for MEDLINE]Related articles

Sequence comparison of distal and proximal ribosomal DNA arrays in rice (Oryza sativa L.) chromosome 9S and analysis of their flanking regions.

Fujisawa M, Yamagata H, Kamiya K, Nakamura M, Saji S, Kanamori H, Wu J, Matsumoto T, Sasaki T.

Theor Appl Genet. 2006 Aug;113(3):419-28. Epub 2006 May 30.PMID: 16733757 [PubMed - indexed for MEDLINE]Related articles

New challenges facing interinstitutional social science and educational program evaluation research at academic health centers: a case study from the ELAM program.

Morahan PS, Yamagata H, McDade SA, Richman R, Francis R, Odhner VC.

Acad Med. 2006 Jun;81(6):527-34.PMID: 16728800 [PubMed - indexed for MEDLINE]Related articles

Rice bifunctional alpha-amylase/subtilisin inhibitor: cloning and characterization of the recombinant inhibitor expressed in Escherichia coli.

Yamasaki T, Deguchi M, Fujimoto T, Masumura T, Uno T, Kanamaru K, Yamagata H.

Biosci Biotechnol Biochem. 2006 May;70(5):1200-9.PMID: 16717423 [PubMed - indexed for MEDLINE]Related articlesFree article

Organization and repression by juvenile hormone of a vitellogenin gene cluster in the crustacean, Daphnia magna.

Tokishita S, Kato Y, Kobayashi T, Nakamura S, Ohta T, Yamagata H.

Biochem Biophys Res Commun. 2006 Jun 23;345(1):362-70. Epub 2006 May 2.PMID: 16681994 [PubMed - indexed for MEDLINE]Related articles

Nuclear import of Epstein-Barr virus nuclear antigen 1 mediated by NPI-1 (Importin alpha5) is up- and down-regulated by phosphorylation of the nuclear localization signal for which Lys379 and Arg380 are essential.

Kitamura R, Sekimoto T, Ito S, Harada S, Yamagata H, Masai H, Yoneda Y, Yanagi K.

J Virol. 2006 Feb;80(4):1979-91.PMID: 16439554 [PubMed - indexed for MEDLINE]Related articlesFree article

A novel alternative splice variant of nicastrin and its implication in Alzheimer disease.

Mitsuda N, Yamagata HD, Zhong W, Aoto M, Akatsu H, Uekawa N, Kamino K, Taguchi K, Yamamoto T, Maruyama M, Kosaka K, Takeda M, Kondo I, Miki T.

Life Sci. 2006 Apr 18;78(21):2444-8. Epub 2005 Nov 21.PMID: 16303145 [PubMed - indexed for MEDLINE]Related articles

Expression, purification and characterization of methyl DNA binding protein from Bombyx mori.

Uno T, Nomura Y, Nakamura M, Nakao A, Tajima S, Kanamaru K, Yamagata H, Iwanaga Y.

J Insect Sci. 2005;5:8.PMID: 16299598 [PubMed - indexed for MEDLINE]Related articlesFree article

Classic Rett syndrome in a boy with R133C mutation of MECP2.

Masuyama T, Matsuo M, Jing JJ, Tabara Y, Kitsuki K, Yamagata H, Kan Y, Miki T, Ishii K, Kondo I.

Brain Dev. 2005 Sep;27(6):439-42.PMID: 16122633 [PubMed - indexed for MEDLINE]Related articles

Lymphocyte-specific protein tyrosine kinase is a novel risk gene for Alzheimer disease.

Zhong W, Yamagata HD, Taguchi K, Akatsu H, Kamino K, Yamamoto T, Kosaka K, Takeda M, Kondo I, Miki T.

J Neurol Sci. 2005 Nov 15;238(1-2):53-7. Epub 2005 Aug 16.PMID: 16109429 [PubMed - indexed for MEDLINE]Related articles

Phase I and pharmacokinetic study of amrubicin, a synthetic 9-aminoanthracycline, in patients with refractory or relapsed lung cancer.

Okamoto I, Hamada A, Matsunaga Y, Sasaki J, Fujii S, Uramoto H, Yamagata H, Mori I, Kishi H, Semba H, Saito H.

Cancer Chemother Pharmacol. 2006 Feb;57(3):282-8. Epub 2005 Jul 19.PMID: 16028099 [PubMed - indexed for MEDLINE]Related articles

Exploring embryonic germ line development in the water flea, Daphnia magna, by zinc-finger-containing VASA as a marker.

Sagawa K, Yamagata H, Shiga Y.

Gene Expr Patterns. 2005 Jun;5(5):669-78. Epub 2005 Apr 11.PMID: 15939379 [PubMed - indexed for MEDLINE]Related articles

Cyclophilin D-dependent mitochondrial permeability transition regulates some necrotic but not apoptotic cell death.

Nakagawa T, Shimizu S, Watanabe T, Yamaguchi O, Otsu K, Yamagata H, Inohara H, Kubo T, Tsujimoto Y.

Nature. 2005 Mar 31;434(7033):652-8.PMID: 15800626 [PubMed - indexed for MEDLINE]Related articles

Transforming growth factor-beta and platelet-derived growth factor signal via c-Jun N-terminal kinase-dependent Smad2/3 phosphorylation in rat hepatic stellate cells after acute liver injury.

Yoshida K, Matsuzaki K, Mori S, Tahashi Y, Yamagata H, Furukawa F, Seki T, Nishizawa M, Fujisawa J, Okazaki K.

Am J Pathol. 2005 Apr;166(4):1029-39.PMID: 15793284 [PubMed - indexed for MEDLINE]Related articlesFree article

Impact of fasting plasma glucose levels on gastric cancer incidence in a general Japanese population: the Hisayama study.

Yamagata H, Kiyohara Y, Nakamura S, Kubo M, Tanizaki Y, Matsumoto T, Tanaka K, Kato I, Shirota T, Iida M.

Diabetes Care. 2005 Apr;28(4):789-94.PMID: 15793174 [PubMed - indexed for MEDLINE]Related articlesFree article

Identification of hippocampus-related candidate genes for Alzheimer's disease.

Taguchi K, Yamagata HD, Zhong W, Kamino K, Akatsu H, Hata R, Yamamoto T, Kosaka K, Takeda M, Kondo I, Miki T.

Ann Neurol. 2005 Apr;57(4):585-8.PMID: 15786443 [PubMed - indexed for MEDLINE]Related articles

Methyl-CpG binding protein 2 gene (MECP2) variations in Japanese patients with Rett syndrome: pathological mutations and polymorphisms.

Fukuda T, Yamashita Y, Nagamitsu S, Miyamoto K, Jin JJ, Ohmori I, Ohtsuka Y, Kuwajima K, Endo S, Iwai T, Yamagata H, Tabara Y, Miki T, Matsuishi T, Kondo I.

Brain Dev. 2005 Apr;27(3):211-7.PMID: 15737703 [PubMed - indexed for MEDLINE]Related articles