PubMed

Oncogenic EGFR signaling networks in glioma.

Huang PH, Xu AM, White FM.

Sci Signal. 2009 Sep 8;2(87):re6.PMID: 19738203 [PubMed - in process]Related articles

Mcl-1 integrates the opposing actions of signaling pathways that mediate survival and apoptosis.

Morel C, Carlson SM, White FM, Davis RJ.

Mol Cell Biol. 2009 Jul;29(14):3845-52. Epub 2009 May 11.PMID: 19433446 [PubMed - indexed for MEDLINE]Related articles

Manual validation of peptide sequence and sites of tyrosine phosphorylation from MS/MS spectra.

Nichols AM, White FM.

Methods Mol Biol. 2009;492:143-60.PMID: 19241031 [PubMed - indexed for MEDLINE]Related articles

Mechanical injury and cytokines cause loss of cartilage integrity and upregulate proteins associated with catabolism, immunity, inflammation, and repair.

Stevens AL, Wishnok JS, White FM, Grodzinsky AJ, Tannenbaum SR.

Mol Cell Proteomics. 2009 Jul;8(7):1475-89. Epub 2009 Feb 4.PMID: 19196708 [PubMed - in process]Related articles

An integrated comparative phosphoproteomic and bioinformatic approach reveals a novel class of MPM-2 motifs upregulated in EGFRvIII-expressing glioblastoma cells.

Joughin BA, Naegle KM, Huang PH, Yaffe MB, Lauffenburger DA, White FM.

Mol Biosyst. 2009 Jan;5(1):59-67. Epub 2008 Oct 30.PMID: 19081932 [PubMed - indexed for MEDLINE]Related articles

Phosphoproteomics: unraveling the signaling web.

Huang PH, White FM.

Mol Cell. 2008 Sep 26;31(6):777-81. Review.PMID: 18922462 [PubMed - indexed for MEDLINE]Related articlesFree article

Quantitative phosphoproteomics by mass spectrometry: past, present, and future.

Nita-Lazar A, Saito-Benz H, White FM.

Proteomics. 2008 Nov;8(21):4433-43. Review.PMID: 18846511 [PubMed - indexed for MEDLINE]Related articlesFree article

Illuminating signaling network functional biology through quantitative phosphoproteomic mass spectrometry.

Tedford NC, White FM, Radding JA.

Brief Funct Genomic Proteomic. 2008 Sep;7(5):383-94. Epub 2008 Oct 4.PMID: 18836207 [PubMed - indexed for MEDLINE]Related articles

Quantitative phosphoproteomic analysis of signaling network dynamics.

White FM.

Curr Opin Biotechnol. 2008 Aug;19(4):404-9. Epub 2008 Jul 24. Review.PMID: 18619541 [PubMed - indexed for MEDLINE]Related articlesFree article

Stimulus design for model selection and validation in cell signaling.

Apgar JF, Toettcher JE, Endy D, White FM, Tidor B.

PLoS Comput Biol. 2008 Feb;4(2):e30.PMID: 18282085 [PubMed - indexed for MEDLINE]Related articlesFree article

Uncovering therapeutic targets for glioblastoma: a systems biology approach.

Huang PH, Cavenee WK, Furnari FB, White FM.

Cell Cycle. 2007 Nov 15;6(22):2750-4. Epub 2007 Aug 20. Review.PMID: 17986864 [PubMed - indexed for MEDLINE]Related articles

Cell system perturbation for time-resolved quantification of tyrosine phosphorylation in complex samples.

White FM.

Conf Proc IEEE Eng Med Biol Soc. 2006;1:51-2. No abstract available. PMID: 17946778 [PubMed - indexed for MEDLINE]Related articles

On the iTRAQ of kinase inhibitors.

White FM.

Nat Biotechnol. 2007 Sep;25(9):994-6. No abstract available. PMID: 17846628 [PubMed - indexed for MEDLINE]Related articles

Quantitative analysis of EGFRvIII cellular signaling networks reveals a combinatorial therapeutic strategy for glioblastoma.

Huang PH, Mukasa A, Bonavia R, Flynn RA, Brewer ZE, Cavenee WK, Furnari FB, White FM.

Proc Natl Acad Sci U S A. 2007 Jul 31;104(31):12867-72. Epub 2007 Jul 23.PMID: 17646646 [PubMed - indexed for MEDLINE]Related articlesFree article

Quantitative proteomic analysis of phosphotyrosine-mediated cellular signaling networks.

Zhang Y, Wolf-Yadlin A, White FM.

Methods Mol Biol. 2007;359:203-12.PMID: 17484120 [PubMed - indexed for MEDLINE]Related articles

Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks.

Wolf-Yadlin A, Hautaniemi S, Lauffenburger DA, White FM.

Proc Natl Acad Sci U S A. 2007 Apr 3;104(14):5860-5. Epub 2007 Mar 26.PMID: 17389395 [PubMed - indexed for MEDLINE]Related articlesFree article

14-3-3sigma controls mitotic translation to facilitate cytokinesis.

Wilker EW, van Vugt MA, Artim SA, Huang PH, Petersen CP, Reinhardt HC, Feng Y, Sharp PA, Sonenberg N, White FM, Yaffe MB.

Nature. 2007 Mar 15;446(7133):329-32.PMID: 17361185 [PubMed - indexed for MEDLINE]Related articles

Signaling netwErks get the global treatment.

Yaffe MB, White FM.

Genome Biol. 2007;8(1):202.PMID: 17274840 [PubMed - indexed for MEDLINE]Related articlesFree article

Modeling HER2 effects on cell behavior from mass spectrometry phosphotyrosine data.

Kumar N, Wolf-Yadlin A, White FM, Lauffenburger DA.

PLoS Comput Biol. 2007 Jan 5;3(1):e4. Epub 2006 Nov 21.PMID: 17206861 [PubMed - indexed for MEDLINE]Related articlesFree article

Regulation and specificity of S-nitrosylation and denitrosylation.

Tannenbaum SR, White FM.

ACS Chem Biol. 2006 Nov 21;1(10):615-8. Review.PMID: 17168564 [PubMed - indexed for MEDLINE]Related articles

Collecting and organizing systematic sets of protein data.

Albeck JG, MacBeath G, White FM, Sorger PK, Lauffenburger DA, Gaudet S.

Nat Rev Mol Cell Biol. 2006 Nov;7(11):803-12. Review.PMID: 17057751 [PubMed - indexed for MEDLINE]Related articles

Effects of HER2 overexpression on cell signaling networks governing proliferation and migration.

Wolf-Yadlin A, Kumar N, Zhang Y, Hautaniemi S, Zaman M, Kim HD, Grantcharova V, Lauffenburger DA, White FM.

Mol Syst Biol. 2006;2:54. Epub 2006 Oct 3.PMID: 17016520 [PubMed - indexed for MEDLINE]Related articlesFree article

Temporal dynamics of tyrosine phosphorylation in insulin signaling.

Schmelzle K, Kane S, Gridley S, Lienhard GE, White FM.

Diabetes. 2006 Aug;55(8):2171-9.PMID: 16873679 [PubMed - indexed for MEDLINE]Related articlesFree article

Phosphoproteomic approaches to elucidate cellular signaling networks.

Schmelzle K, White FM.

Curr Opin Biotechnol. 2006 Aug;17(4):406-14. Epub 2006 Jun 27. Review.PMID: 16806894 [PubMed - indexed for MEDLINE]Related articles

Survey and surveillance development in settings with low human immunodeficiency virus prevalence.

Nanan DJ, Kadir MM, White FM.

J Pak Med Assoc. 2006 Jan;56(1 Suppl 1):S39-43.PMID: 16689483 [PubMed]Related articles

Quantitative analysis of phosphotyrosine signaling networks triggered by CD3 and CD28 costimulation in Jurkat cells.

Kim JE, White FM.

J Immunol. 2006 Mar 1;176(5):2833-43.PMID: 16493040 [PubMed - indexed for MEDLINE]Related articlesFree article

Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.

Moser K, White FM.

J Proteome Res. 2006 Jan;5(1):98-104.PMID: 16396499 [PubMed - indexed for MEDLINE]Related articles

Family planning practices among currently married women in Khairpur District, Sindh, Pakistan.

Ali S, White FM.

J Coll Physicians Surg Pak. 2005 Jul;15(7):422-5.PMID: 16197872 [PubMed - indexed for MEDLINE]Related articles

Quantification of isomers from a mixture of twelve heparin and heparan sulfate disaccharides using tandem mass spectrometry.

Behr JR, Matsumoto Y, White FM, Sasisekharan R.

Rapid Commun Mass Spectrom. 2005;19(18):2553-62.PMID: 16124039 [PubMed - indexed for MEDLINE]Related articles

Global phosphoproteome of HT-29 human colon adenocarcinoma cells.

Kim JE, Tannenbaum SR, White FM.

J Proteome Res. 2005 Jul-Aug;4(4):1339-46.PMID: 16083285 [PubMed - indexed for MEDLINE]Related articles

Proteomic analysis of cellular signaling.

Chen WG, White FM.

Expert Rev Proteomics. 2004 Oct;1(3):343-54. Review.PMID: 15966830 [PubMed - indexed for MEDLINE]Related articles

Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules.

Zhang Y, Wolf-Yadlin A, Ross PL, Pappin DJ, Rush J, Lauffenburger DA, White FM.

Mol Cell Proteomics. 2005 Sep;4(9):1240-50. Epub 2005 Jun 11.PMID: 15951569 [PubMed - indexed for MEDLINE]Related articlesFree article

Ethnic differences and determinants of diabetes and central obesity among South Asians of Pakistan.

Jafar TH, Levey AS, White FM, Gul A, Jessani S, Khan AQ, Jafary FH, Schmid CH, Chaturvedi N.

Diabet Med. 2004 Jul;21(7):716-23.PMID: 15209764 [PubMed - indexed for MEDLINE]Related articles

Tapasin is a facilitator, not an editor, of class I MHC peptide binding.

Zarling AL, Luckey CJ, Marto JA, White FM, Brame CJ, Evans AM, Lehner PJ, Cresswell P, Shabanowitz J, Hunt DF, Engelhard VH.

J Immunol. 2003 Nov 15;171(10):5287-95.PMID: 14607930 [PubMed - indexed for MEDLINE]Related articlesFree article

Weak agonist self-peptides promote selection and tuning of virus-specific T cells.

Saibil SD, Ohteki T, White FM, Luscher M, Zakarian A, Elford A, Shabanowitz J, Nishina H, Hugo P, Penninger J, Barber B, Hunt DF, Ohashi PS.

Eur J Immunol. 2003 Mar;33(3):685-96.PMID: 12616489 [PubMed - indexed for MEDLINE]Related articles

Analysis of MHC class II antigen processing by quantitation of peptides that constitute nested sets.

Lippolis JD, White FM, Marto JA, Luckey CJ, Bullock TN, Shabanowitz J, Hunt DF, Engelhard VH.

J Immunol. 2002 Nov 1;169(9):5089-97.PMID: 12391225 [PubMed - indexed for MEDLINE]Related articlesFree article

Androgen receptor phosphorylation. Regulation and identification of the phosphorylation sites.

Gioeli D, Ficarro SB, Kwiek JJ, Aaronson D, Hancock M, Catling AD, White FM, Christian RE, Settlage RE, Shabanowitz J, Hunt DF, Weber MJ.

J Biol Chem. 2002 Aug 9;277(32):29304-14. Epub 2002 May 15.PMID: 12015328 [PubMed - indexed for MEDLINE]Related articlesFree article

Identification by mass spectrometry of CD8(+)-T-cell Mycobacterium tuberculosis epitopes within the Rv0341 gene product.

Flyer DC, Ramakrishna V, Miller C, Myers H, McDaniel M, Root K, Flournoy C, Engelhard VH, Canaday DH, Marto JA, Ross MM, Hunt DF, Shabanowitz J, White FM.

Infect Immun. 2002 Jun;70(6):2926-32.PMID: 12010981 [PubMed - indexed for MEDLINE]Related articlesFree article

Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae.

Ficarro SB, McCleland ML, Stukenberg PT, Burke DJ, Ross MM, Shabanowitz J, Hunt DF, White FM.

Nat Biotechnol. 2002 Mar;20(3):301-5.PMID: 11875433 [PubMed - indexed for MEDLINE]Related articles

Survey and surveillance development in settings with low human immunodeficiency virus prevalence.

Nanan DJ, Kadir MM, White FM.

East Mediterr Health J. 2000 Jul;6(4):670-7.PMID: 11794073 [PubMed - indexed for MEDLINE]Related articles

Differences in the expression of human class I MHC alleles and their associated peptides in the presence of proteasome inhibitors.

Luckey CJ, Marto JA, Partridge M, Hall E, White FM, Lippolis JD, Shabanowitz J, Hunt DF, Engelhard VH.

J Immunol. 2001 Aug 1;167(3):1212-21.PMID: 11466336 [PubMed - indexed for MEDLINE]Related articlesFree article

Identification and modulation of a naturally processed T cell epitope from the diabetes-associated autoantigen human glutamic acid decarboxylase 65 (hGAD65).

Nepom GT, Lippolis JD, White FM, Masewicz S, Marto JA, Herman A, Luckey CJ, Falk B, Shabanowitz J, Hunt DF, Engelhard VH, Nepom BS.

Proc Natl Acad Sci U S A. 2001 Feb 13;98(4):1763-8.PMID: 11172025 [PubMed - indexed for MEDLINE]Related articlesFree article

Phosphorylated peptides are naturally processed and presented by major histocompatibility complex class I molecules in vivo.

Zarling AL, Ficarro SB, White FM, Shabanowitz J, Hunt DF, Engelhard VH.

J Exp Med. 2000 Dec 18;192(12):1755-62.PMID: 11120772 [PubMed - indexed for MEDLINE]Related articlesFree article

Characterization and evolutionary relevance of the sperm nuclear basic proteins from stickleback fish.

Gimenez-Bonafé P, Laszczak M, Kasinsky HE, Lemke MJ, Lewis JD, Iskandar M, He T, Ikonomou MG, White FM, Hunt DF, Chiva M, Ausió J.

Mol Reprod Dev. 2000 Oct;57(2):185-93.PMID: 10984419 [PubMed - indexed for MEDLINE]Related articles

Corrigendum to 'A hyperglycemic peptide hormone from the caribbean shrimp penaeus (litopenaeus) schmitti'*(1)

Huberman A, Aguilar MB, Navarro-Quiroga I I, Ramos L, Fernandez I I, White FM, Hunt DF.

Peptides. 2000 May;21(5):753. No abstract available. PMID: 10876060 [PubMed - as supplied by publisher]Related articles

Immunodominance among EBV-derived epitopes restricted by HLA-B27 does not correlate with epitope abundance in EBV-transformed B-lymphoblastoid cell lines.

Crotzer VL, Christian RE, Brooks JM, Shabanowitz J, Settlage RE, Marto JA, White FM, Rickinson AB, Hunt DF, Engelhard VH.

J Immunol. 2000 Jun 15;164(12):6120-9.PMID: 10843661 [PubMed - indexed for MEDLINE]Related articlesFree article

A hyperglycemic peptide hormone from the Caribbean shrimp Penaeus (litopenaeus) schmitti.

Huberman A, Aguilar MB, Navarro-Quiroga I, Ramos L, Fernández I, White FM, Hunt DF, Shabanowitz J.

Peptides. 2000 Mar;21(3):331-8. Erratum in: Peptides 2000 May;21(5):753. PMID: 10793213 [PubMed - indexed for MEDLINE]Related articles

Cutting edge: the HLA-A*0101-restricted HY minor histocompatibility antigen originates from DFFRY and contains a cysteinylated cysteine residue as identified by a novel mass spectrometric technique.

Pierce RA, Field ED, den Haan JM, Caldwell JA, White FM, Marto JA, Wang W, Frost LM, Blokland E, Reinhardus C, Shabanowitz J, Hunt DF, Goulmy E, Engelhard VH.

J Immunol. 1999 Dec 15;163(12):6360-4.PMID: 10586024 [PubMed - indexed for MEDLINE]Related articlesFree article

Application of micro-electrospray liquid chromatography techniques to FT-ICR MS to enable high-sensitivity biological analysis.

Emmett MR, White FM, Hendrickson CL, Shi SD, Marshall AG.

J Am Soc Mass Spectrom. 1998 Apr;9(4):333-40.PMID: 9879363 [PubMed - indexed for MEDLINE]Related articles

An external source 7 T Fourier transform ion cyclotron resonance mass spectrometer with electrostatic ion guide.

White FM, Marto JA, Marshall AG.

Rapid Commun Mass Spectrom. 1996;10(14):1845-9.PMID: 8953787 [PubMed - indexed for MEDLINE]Related articles