PubMed

Dose adjustment of the non-nucleoside reverse transcriptase inhibitors during concurrent rifampicin-containing tuberculosis therapy: one size does not fit all.

Kwara A, Ramachandran G, Swaminathan S.

Expert Opin Drug Metab Toxicol. 2009 Dec 7. [Epub ahead of print]PMID: 19968575 [PubMed - as supplied by publisher]Related articles

Efficacy of a 6 vs. a 9-month Intermittent Treatment Regimen in HIV-infected TB Patients: A Randomized Clinical Trial.

Swaminathan S, Narendran G, Venkatesan P, Iliayas S, Santhanakrishnan R, Menon PA, Padmapriyadarsini C, Ramachandran R, Chinnaiyan P, Suhadev M, Sakthivel R, Narayanan P.

Am J Respir Crit Care Med. 2009 Dec 3. [Epub ahead of print]PMID: 19965813 [PubMed - as supplied by publisher]Related articles

Research highlights.

Bot NL, Grisendi S, Rosenthal CK, Swaminathan S.

Nat Cell Biol. 2009 Dec;11(12):1398. No abstract available. PMID: 19949439 [PubMed - in process]Related articles

Pharmacokinetics of lamivudine & stavudine in generic fixed-dose combinations in HIV-1 infected adults in India.

Hemanth Kumar AK, Ramachandran G, Rajasekaran S, Padmapriyadarsini C, Narendran G, Anitha S, Subramanyam S, Kumaraswami V, Swaminathan S.

Indian J Med Res. 2009 Oct;130(4):451-7.PMID: 19942751 [PubMed - in process]Related articles

CCR2, MCP-1, SDF-1a & DC-sign gene polymorphisms in HIV-1 infected patients with & without tuberculosis.

Alagarasu K, Selvaraj P, Swaminathan S, Raghavan S, Narendran G, Narayanan PR.

Indian J Med Res. 2009 Oct;130(4):444-50.PMID: 19942750 [PubMed - in process]Related articles

Feasibility of provider-initiated HIV testing and counselling of tuberculosis patients under the TB control programme in two districts of South India.

Vijay S, Swaminathan S, Vaidyanathan P, Thomas A, Chauhan LS, Kumar P, Chiddarwar S, Thomas B, Dewan PK.

PLoS One. 2009 Nov 19;4(11):e7899.PMID: 19936067 [PubMed - in process]Related articlesFree article

Contact screening and chemoprophylaxis in India's Revised Tuberculosis Control Programme: a situational analysis.

Banu Rekha VV, Jagarajamma K, Wares F, Chandrasekaran V, Swaminathan S.

Int J Tuberc Lung Dis. 2009 Dec;13(12):1507-12.PMID: 19919768 [PubMed - in process]Related articles

Mycobacterium marinum Hand Infection in a "Sushi Chef".

Cennimo DJ, Agag R, Fleegler E, Lardizabal A, Klein KM, Wenokor C, Swaminathan S.

Eplasty. 2009 Oct 14;9:e43.PMID: 19915656 [PubMed - in process]Related articlesFree article

Cyclodextrin-based nanosponges encapsulating camptothecin: Physicochemical characterization, stability and cytotoxicity.

Swaminathan S, Pastero L, Serpe L, Trotta F, Vavia P, Aquilano D, Trotta M, Zara G, Cavalli R.

Eur J Pharm Biopharm. 2009 Nov 10. [Epub ahead of print]PMID: 19900544 [PubMed - as supplied by publisher]Related articles

Antiretroviral drug-resistant mutations at baseline and at time of failure of antiretroviral therapy in HIV type 1-coinfected TB patients.

Rajesh L, Karunaianantham R, Narayanan PR, Swaminathan S.

AIDS Res Hum Retroviruses. 2009 Nov;25(11):1179-85.PMID: 19895208 [PubMed - in process]Related articles

CYP76M7 is an ent-cassadiene C11alpha-hydroxylase defining a second multifunctional diterpenoid biosynthetic gene cluster in rice.

Swaminathan S, Morrone D, Wang Q, Fulton DB, Peters RJ.

Plant Cell. 2009 Oct;21(10):3315-25. Epub 2009 Oct 13.PMID: 19825834 [PubMed - in process]Related articlesFree article

Novel immunophenotypic and morphologic presentation in acute myeloid leukemia (AML) with JAK2 V617F mutation.

Swaminathan S, Madkaikar M, Ghosh K, Vundinti BR, Kerketta L, Gupta M.

Eur J Haematol. 2009 Oct 12. [Epub ahead of print] No abstract available. PMID: 19824900 [PubMed - as supplied by publisher]Related articles

HIV prevention interventions in Chennai, India: are men who have sex with men being reached?

Thomas B, Mimiaga MJ, Mayer KH, Johnson CV, Menon S, Chandrasekaran V, Murugesan P, Swaminathan S, Safren SA.

AIDS Patient Care STDS. 2009 Nov;23(11):981-6.PMID: 19821722 [PubMed - in process]Related articles

Discovery and preclinical evaluation of [4-[[1-(3-fluorophenyl)methyl]-1H-indazol-5-ylamino]-5-methylpyrrolo[2,1-f][1,2,4]triazin-6-yl]carbamic acid, (3S)-3-morpholinylmethyl ester (BMS-599626), a selective and orally efficacious inhibitor of human epidermal growth factor receptor 1 and 2 kinases.

Gavai AV, Fink BE, Fairfax DJ, Martin GS, Rossiter LM, Holst CL, Kim SH, Leavitt KJ, Mastalerz H, Han WC, Norris D, Goyal B, Swaminathan S, Patel B, Mathur A, Vyas DM, Tokarski JS, Yu C, Oppenheimer S, Zhang H, Marathe P, Fargnoli J, Lee FY, Wong TW, Vite GD.

J Med Chem. 2009 Nov 12;52(21):6527-30.PMID: 19821562 [PubMed - in process]Related articles

Short communication: association of HLA-A*1101 with resistance and B*4006 with susceptibility to HIV and HIV-TB: an in silico analysis of promiscuous T cell epitopes.

Raghavan S, Selvaraj P, Swaminathan S, Narendran G.

AIDS Res Hum Retroviruses. 2009 Oct;25(10):1023-8.PMID: 19803716 [PubMed - in process]Related articles

The use of nanoparticle-mediated targeted gene silencing and drug delivery to overcome tumor drug resistance.

Patil YB, Swaminathan SK, Sadhukha T, Ma L, Panyam J.

Biomaterials. 2010 Jan;31(2):358-65. Epub 2009 Oct 1.PMID: 19800114 [PubMed - in process]Related articles

Structural studies on cytosolic domain of magnesium transporter MgtE from Enterococcus faecalis.

Ragumani S, Sauder JM, Burley SK, Swaminathan S.

Proteins. 2009 Aug 21;78(2):487-491. [Epub ahead of print] No abstract available. PMID: 19787770 [PubMed - as supplied by publisher]Related articles

HIV-1 Tat-specific IgG antibodies in high-responders target a B-cell epitope in the cysteine-rich domain and block extracellular Tat efficiently.

Kashi VP, Jacob RA, Paul S, Nayak K, Satish B, Swaminathan S, Satish KS, Ranga U.

Vaccine. 2009 Nov 12;27(48):6739-47. Epub 2009 Sep 8.PMID: 19744585 [PubMed - in process]Related articles

General and target-specific RNA binding properties of Epstein-Barr virus SM posttranscriptional regulatory protein.

Han Z, Verma D, Hilscher C, Dittmer DP, Swaminathan S.

J Virol. 2009 Nov;83(22):11635-44. Epub 2009 Sep 2.PMID: 19726500 [PubMed - in process]Related articles

HIV & smoking in India.

Kumar SR, Swaminathan S, Flanigan T, Mayer KH, Niaura R.

Indian J Med Res. 2009 Jul;130(1):15-22. Review.PMID: 19700796 [PubMed - indexed for MEDLINE]Related articlesFree article

Gender differences in sexual behaviour among people living with HIV in Chennai, India.

Thomas BE, Chandra S, Selvi KJ, Suriyanarayanan D, Swaminathan S.

Indian J Med Res. 2009 Jun;129(6):690-4.PMID: 19692751 [PubMed - in process]Related articlesFree article

Incomplete immunological recovery following anti-tuberculosis treatment in HIV-infected individuals with active tuberculosis.

Hanna LE, Nayak K, Subramanyam S, Venkatesan P, Narayanan PR, Swaminathan S.

Indian J Med Res. 2009 May;129(5):548-54.PMID: 19675383 [PubMed - in process]Related articlesFree article

Unseen and unheard: predictors of sexual risk behavior and HIV infection among men who have sex with men in Chennai, India.

Thomas B, Mimiaga MJ, Menon S, Chandrasekaran V, Murugesan P, Swaminathan S, Mayer KH, Safren SA.

AIDS Educ Prev. 2009 Aug;21(4):372-83.PMID: 19670971 [PubMed - indexed for MEDLINE]Related articles

An adenovirus type 5 (AdV5) vector encoding an envelope domain III-based tetravalent antigen elicits immune responses against all four dengue viruses in the presence of prior AdV5 immunity.

Khanam S, Pilankatta R, Khanna N, Swaminathan S.

Vaccine. 2009 Oct 9;27(43):6011-21. Epub 2009 Aug 7.PMID: 19665609 [PubMed - indexed for MEDLINE]Related articles

Mode of VAMP substrate recognition and inhibition of Clostridium botulinum neurotoxin F.

Agarwal R, Schmidt JJ, Stafford RG, Swaminathan S.

Nat Struct Mol Biol. 2009 Jul;16(7):789-94. Epub 2009 Jun 21.PMID: 19543288 [PubMed - indexed for MEDLINE]Related articles

Negative autoregulation of Epstein-Barr virus (EBV) replicative gene expression by EBV SM protein.

Verma D, Ling C, Johannsen E, Nagaraja T, Swaminathan S.

J Virol. 2009 Aug;83(16):8041-50. Epub 2009 Jun 10.PMID: 19515786 [PubMed - indexed for MEDLINE]Related articles

Prospective real-time correction for arbitrary head motion using active markers.

Ooi MB, Krueger S, Thomas WJ, Swaminathan SV, Brown TR.

Magn Reson Med. 2009 Oct;62(4):943-54.PMID: 19488989 [PubMed - in process]Related articles

Role of interferon gamma release assay in active TB diagnosis among HIV infected individuals.

Syed Ahamed Kabeer B, Sikhamani R, Swaminathan S, Perumal V, Paramasivam P, Raja A.

PLoS One. 2009 May 28;4(5):e5718.PMID: 19479058 [PubMed - indexed for MEDLINE]Related articlesFree article

Does the presence of anti-HIV miRNAs in monocytes explain their resistance to HIV-1 infection?

Swaminathan S, Zaunders J, Wilkinson J, Suzuki K, Kelleher AD.

Blood. 2009 May 14;113(20):5029-30; author reply 5030-1. No abstract available. PMID: 19443673 [PubMed - indexed for MEDLINE]Related articles

Metal deposition in calcific uremic arteriolopathy.

Amuluru L, High W, Hiatt KM, Ranville J, Shah SV, Malik B, Swaminathan S.

J Am Acad Dermatol. 2009 Jul;61(1):73-9. Epub 2009 Apr 29.PMID: 19406504 [PubMed - indexed for MEDLINE]Related articles

Letter to the editor regarding 'Acute phase reaction to gadolinium-DTPA in dialysis patients'.

Swaminathan S, Shah SV.

Nephrol Dial Transplant. 2009 Jul;24(7):2295-6; author reply 2296. Epub 2009 Apr 25. No abstract available. PMID: 19395733 [PubMed - indexed for MEDLINE]Related articles

Haplotype analysis of HLA-A, -B antigens and -DRB1 alleles in south Indian HIV-1-infected patients with and without pulmonary tuberculosis.

Raghavan S, Selvaraj P, Swaminathan S, Alagarasu K, Narendran G, Narayanan PR.

Int J Immunogenet. 2009 Jun;36(3):129-33.PMID: 19392836 [PubMed - indexed for MEDLINE]Related articles

Motor-mediated alignment of microtubules in semidilute mixtures.

Swaminathan S, Ziebert F, Karpeev D, Aranson IS.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Mar;79(3 Pt 2):036207. Epub 2009 Mar 23.PMID: 19392035 [PubMed]Related articles

Functional annotation of two new carboxypeptidases from the amidohydrolase superfamily of enzymes.

Xiang DF, Xu C, Kumaran D, Brown AC, Sauder JM, Burley SK, Swaminathan S, Raushel FM.

Biochemistry. 2009 Jun 2;48(21):4567-76.PMID: 19358546 [PubMed - indexed for MEDLINE]Related articles

Dengue: recent advances in biology and current status of translational research.

Swaminathan S, Khanna N.

Curr Mol Med. 2009 Mar;9(2):152-73. Review.PMID: 19275624 [PubMed - indexed for MEDLINE]Related articles

Sensitivity & specificity of combination testing algorithms for HIV in a tuberculosis clinic.

Swaminathan S, Antony L, Venkatesan P, Hanna LE, Angayarkanni B, Ponnuraja C, Robin J, Precilla KL, Ramachandran R.

Indian J Med Res. 2008 Dec;128(6):772-4. No abstract available. PMID: 19246804 [PubMed - indexed for MEDLINE]Related articlesFree article

Factors associated with willingness to participate in HIV vaccine trials among high-risk populations in South India.

Suhadev M, Nyamathi AM, Swaminathan S, Suresh A, Venkatesan P.

AIDS Res Hum Retroviruses. 2009 Feb;25(2):217-24.PMID: 19239362 [PubMed - indexed for MEDLINE]Related articles

Target selection and annotation for the structural genomics of the amidohydrolase and enolase superfamilies.

Pieper U, Chiang R, Seffernick JJ, Brown SD, Glasner ME, Kelly L, Eswar N, Sauder JM, Bonanno JB, Swaminathan S, Burley SK, Zheng X, Chance MR, Almo SC, Gerlt JA, Raushel FM, Jacobson MP, Babbitt PC, Sali A.

J Struct Funct Genomics. 2009 Apr;10(2):107-25. Epub 2009 Feb 14.PMID: 19219566 [PubMed - indexed for MEDLINE]Related articlesFree article

Association of high T allele frequency of CYP2B6 G516T polymorphism among ethnic south Indian HIV-infected patients with elevated plasma efavirenz and nevirapine.

Ramachandran G, Ramesh K, Hemanth Kumar AK, Jagan I, Vasantha M, Padmapriyadarsini C, Narendran G, Rajasekaran S, Swaminathan S.

J Antimicrob Chemother. 2009 Apr;63(4):841-3. Epub 2009 Feb 13. No abstract available. PMID: 19218571 [PubMed - indexed for MEDLINE]Related articles

HIV and tuberculosis in India.

Swaminathan S, Nagendran G.

J Biosci. 2008 Nov;33(4):527-37. Review.PMID: 19208978 [PubMed - indexed for MEDLINE]Related articlesFree article

Simple high-cell density fed-batch technique for high-level recombinant protein production with Pichia pastoris: Application to intracellular production of Hepatitis B surface antigen.

Gurramkonda C, Adnan A, Gäbel T, Lünsdorf H, Ross A, Nemani SK, Swaminathan S, Khanna N, Rinas U.

Microb Cell Fact. 2009 Feb 10;8:13.PMID: 19208244 [PubMed - in process]Related articlesFree article

Rapid progression of HIV infection in infancy.

Devi NP, Shenbagavalli R, Ramesh K, Rathinam SN, Swaminathan S.

Indian Pediatr. 2009 Jan;46(1):53-6.PMID: 19179719 [PubMed - indexed for MEDLINE]Related articlesFree article

CD209 gene polymorphisms in South Indian HIV and HIV-TB patients.

Selvaraj P, Alagarasu K, Swaminathan S, Harishankar M, Narendran G.

Infect Genet Evol. 2009 Mar;9(2):256-62. Epub 2008 Dec 14.PMID: 19126442 [PubMed - indexed for MEDLINE]Related articles

CYP2B6 G516T polymorphism but not rifampin coadministration influences steady-state pharmacokinetics of efavirenz in human immunodeficiency virus-infected patients in South India.

Ramachandran G, Hemanth Kumar AK, Rajasekaran S, Kumar P, Ramesh K, Anitha S, Narendran G, Menon P, Gomathi C, Swaminathan S.

Antimicrob Agents Chemother. 2009 Mar;53(3):863-8. Epub 2009 Jan 5.PMID: 19124658 [PubMed - indexed for MEDLINE]Related articlesFree article

Improved diagnosis of tuberculosis in HIV-positive patients using RD1-encoded antigen CFP-10.

Rao PV, Murthy MK, Basirudeen S, Sharma P, Swaminathan S, Raja A.

Int J Infect Dis. 2009 Sep;13(5):613-22. Epub 2008 Dec 31.PMID: 19119038 [PubMed - in process]Related articles

Domain organization in Clostridium botulinum neurotoxin type E is unique: its implication in faster translocation.

Kumaran D, Eswaramoorthy S, Furey W, Navaza J, Sax M, Swaminathan S.

J Mol Biol. 2009 Feb 13;386(1):233-45. Epub 2008 Dec 24.PMID: 19118561 [PubMed - indexed for MEDLINE]Related articles

Insurance parity and the use of outpatient mental health care following a psychiatric hospitalization.

Trivedi AN, Swaminathan S, Mor V.

JAMA. 2008 Dec 24;300(24):2879-85.PMID: 19109116 [PubMed - indexed for MEDLINE]Related articlesFree article

UPF201 archaeal specific family members reveal structural similarity to RNA-binding proteins but low likelihood for RNA-binding function.

Rao KN, Burley SK, Swaminathan S.

PLoS One. 2008;3(12):e3903. Epub 2008 Dec 11.PMID: 19079550 [PubMed - indexed for MEDLINE]Related articlesFree article

Understanding the physical properties that control protein crystallization by analysis of large-scale experimental data.

Price WN 2nd, Chen Y, Handelman SK, Neely H, Manor P, Karlin R, Nair R, Liu J, Baran M, Everett J, Tong SN, Forouhar F, Swaminathan SS, Acton T, Xiao R, Luft JR, Lauricella A, DeTitta GT, Rost B, Montelione GT, Hunt JF.

Nat Biotechnol. 2009 Jan;27(1):51-7.PMID: 19079241 [PubMed - indexed for MEDLINE]Related articles

Degradation of BRCA2 in alkyltransferase-mediated DNA repair and its clinical implications.

Philip S, Swaminathan S, Kuznetsov SG, Kanugula S, Biswas K, Chang S, Loktionova NA, Haines DC, Kaldis P, Pegg AE, Sharan SK.

Cancer Res. 2008 Dec 1;68(23):9973-81.PMID: 19047179 [PubMed - indexed for MEDLINE]Related articlesFree article