PubMed

Crystal and solution structures of a prokaryotic M16B peptidase: an open and shut case.

Aleshin AE, Gramatikova S, Hura GL, Bobkov A, Strongin AY, Stec B, Tainer JA, Liddington RC, Smith JW.

Structure. 2009 Nov 11;17(11):1465-75.PMID: 19913481 [PubMed - in process]Related articles

Mass spectrometry-based label-free quantitative proteomics.

Zhu W, Smith JW, Huang CM.

J Biomed Biotechnol. 2010;2010:840518. Epub 2009 Nov 10.PMID: 19911078 [PubMed - in process]Related articlesFree article

Investigation of copper oxide impregnants prepared from various precursors for respirator carbons.

Smith JW, Westreich P, Smith AJ, Fortier H, Croll LM, Reynolds JH, Dahn JR.

J Colloid Interface Sci. 2010 Jan 1;341(1):162-70. Epub 2009 Sep 20.PMID: 19822325 [PubMed - in process]Related articles

John Stone, MD.

Smith JW.

Am J Med. 2009 Oct;122(10):888-9. No abstract available. PMID: 19786153 [PubMed - indexed for MEDLINE]Related articles

Neurologic abnormalities in HTLV-I- and HTLV-II-infected individuals without overt myelopathy.

Biswas HH, Engstrom JW, Kaidarova Z, Garratty G, Gibble JW, Newman BH, Smith JW, Ziman A, Fridey JL, Sacher RA, Murphy EL.

Neurology. 2009 Sep 8;73(10):781-9.PMID: 19738173 [PubMed - indexed for MEDLINE]Related articles

Inflammatory proprotein convertase-matrix metalloproteinase proteolytic pathway in antigen-presenting cells as a step to autoimmune multiple sclerosis.

Shiryaev SA, Remacle AG, Savinov AY, Chernov AV, Cieplak P, Radichev IA, Williams R, Shiryaeva TN, Gawlik K, Postnova TI, Ratnikov BI, Eroshkin AM, Motamedchaboki K, Smith JW, Strongin AY.

J Biol Chem. 2009 Oct 30;284(44):30615-26. Epub 2009 Sep 2.PMID: 19726693 [PubMed - indexed for MEDLINE]Related articles

Management differences for pediatric solid organ injuries in a rural state.

Harbrecht BG, Franklin GA, Smith JW, Foley DS, Miller FB, Richardson JD.

Am Surg. 2009 Aug;75(8):725-9.PMID: 19725299 [PubMed - indexed for MEDLINE]Related articles

What is biomedical informatics?

Bernstam EV, Smith JW, Johnson TR.

J Biomed Inform. 2009 Aug 13. [Epub ahead of print]PMID: 19683067 [PubMed - as supplied by publisher]Related articles

Incremental increases in organ retrieval after protocol driven change in an organ procurement organization: a 15-year assessment.

Franklin GA, Smith JW, Daugherty W, Threkeld T, Garrison RN.

Am Surg. 2009 Jul;75(7):537-43; discussion 543-4.PMID: 19655595 [PubMed - indexed for MEDLINE]Related articles

Identification and functional characterization of cytoplasmic determinants of plasmid DNA nuclear import.

Munkonge FM, Amin V, Hyde SC, Green AM, Pringle IA, Gill DR, Smith JW, Hooley RP, Xenariou S, Ward MA, Leeds N, Leung KY, Chan M, Hillery E, Geddes DM, Griesenbach U, Postel EH, Dean DA, Dunn MJ, Alton EW.

J Biol Chem. 2009 Sep 25;284(39):26978-87. Epub 2009 Jul 28.PMID: 19638341 [PubMed - indexed for MEDLINE]Related articles

Synergies and distinctions between computational disciplines in biomedical research: perspective from the Clinical andTranslational Science Award programs.

Bernstam EV, Hersh WR, Johnson SB, Chute CG, Nguyen H, Sim I, Nahm M, Weiner MG, Miller P, DiLaura RP, Overcash M, Lehmann HP, Eichmann D, Athey BD, Scheuermann RH, Anderson N, Starren J, Harris PA, Smith JW, Barbour E, Silverstein JC, Krusch DA, Nagarajan R, Becich MJ; CTSA Biomedical Informatics Key Function Committee.

Acad Med. 2009 Jul;84(7):964-70. Review.PMID: 19550198 [PubMed - indexed for MEDLINE]Related articles

Understanding the role of each ingredient in a basic copper carbonate based impregnation recipe for respirator carbons.

Smith JW, Westreich P, Croll LM, Reynolds JH, Dahn JR.

J Colloid Interface Sci. 2009 Sep 15;337(2):313-21. Epub 2009 May 24.PMID: 19539946 [PubMed]Related articles

Unintended consequences of health information technology: A need for biomedical informatics.

Bernstam EV, Hersh WR, Sim I, Eichmann D, Silverstein JC, Smith JW, Becich MJ.

J Biomed Inform. 2009 Jun 7. [Epub ahead of print] No abstract available. PMID: 19508898 [PubMed - as supplied by publisher]Related articles

Results of a phase II open-label, nonrandomized trial of oral satraplatin in patients with metastatic breast cancer.

Smith JW 2nd, McIntyre KJ, Acevedo PV, Encarnacion CA, Tedesco KL, Wang Y, Asmar L, O'Shaughnessy JA.

Breast Cancer Res Treat. 2009 Nov;118(2):361-7. Epub 2009 May 21.PMID: 19459042 [PubMed - in process]Related articles

Diverse and often opposite behavioural effects of NMDA receptor antagonists in rats: implications for "NMDA antagonist modelling" of schizophrenia.

Gilmour G, Pioli EY, Dix SL, Smith JW, Conway MW, Jones WT, Loomis S, Mason R, Shahabi S, Tricklebank MD.

Psychopharmacology (Berl). 2009 Aug;205(2):203-16. Epub 2009 May 7.PMID: 19421743 [PubMed - indexed for MEDLINE]Related articles

High throughput substrate phage display for protease profiling.

Ratnikov B, Cieplak P, Smith JW.

Methods Mol Biol. 2009;539:93-114.PMID: 19377968 [PubMed - indexed for MEDLINE]Related articles

Matrix metalloproteinase proteolysis of the myelin basic protein isoforms is a source of immunogenic peptides in autoimmune multiple sclerosis.

Shiryaev SA, Savinov AY, Cieplak P, Ratnikov BI, Motamedchaboki K, Smith JW, Strongin AY.

PLoS One. 2009;4(3):e4952. Epub 2009 Mar 20.PMID: 19300513 [PubMed - indexed for MEDLINE]Related articlesFree article

The influence of (18)flourodeoxyglucose positron emission tomography on the management of gastroesophageal junction carcinoma.

Smith JW, Moreira J, Abood G, Aranha GV, Nagda S, Wagner RH, Shoup M.

Am J Surg. 2009 Mar;197(3):308-12.PMID: 19245906 [PubMed - indexed for MEDLINE]Related articles

Ontology driven integration platform for clinical and translational research.

Mirhaji P, Zhu M, Vagnoni M, Bernstam EV, Zhang J, Smith JW.

BMC Bioinformatics. 2009 Feb 5;10 Suppl 2:S2.PMID: 19208190 [PubMed - indexed for MEDLINE]Related articlesFree article

The DAZL and PABP families: RNA-binding proteins with interrelated roles in translational control in oocytes.

Brook M, Smith JW, Gray NK.

Reproduction. 2009 Apr;137(4):595-617. Epub 2009 Feb 18.PMID: 19225045 [PubMed - in process]Related articles

Extracellular and intracellular mechanisms that mediate the metastatic activity of exogenous osteopontin.

Mandelin J, Lin EC, Hu DD, Knowles SK, Do KA, Wang X, Sage EH, Smith JW, Arap W, Pasqualini R.

Cancer. 2009 Apr 15;115(8):1753-64.PMID: 19224553 [PubMed - indexed for MEDLINE]Related articles

Recognising nicotine: the neurobiological basis of nicotine discrimination.

Smith JW, Stolerman IP.

Handb Exp Pharmacol. 2009;(192):295-333. Review.PMID: 19184654 [PubMed - indexed for MEDLINE]Related articles

Charge separation in the aerodynamic breakup of micrometer-sized water droplets.

Zilch LW, Maze JT, Smith JW, Ewing GE, Jarrold MF.

J Phys Chem A. 2008 Dec 25;112(51):13352-63.PMID: 19035820 [PubMed]Related articles

Diagnosis and management of neonatal alloimmune thrombocytopenia.

Arnold DM, Smith JW, Kelton JG.

Transfus Med Rev. 2008 Oct;22(4):255-67. Review.PMID: 18848153 [PubMed - indexed for MEDLINE]Related articles

PMAP: databases for analyzing proteolytic events and pathways.

Igarashi Y, Heureux E, Doctor KS, Talwar P, Gramatikova S, Gramatikoff K, Zhang Y, Blinov M, Ibragimova SS, Boyd S, Ratnikov B, Cieplak P, Godzik A, Smith JW, Osterman AL, Eroshkin AM.

Nucleic Acids Res. 2009 Jan;37(Database issue):D611-8. Epub 2008 Oct 8.PMID: 18842634 [PubMed - indexed for MEDLINE]Related articlesFree article

Inhibition of fatty-acid synthase induces caspase-8-mediated tumor cell apoptosis by up-regulating DDIT4.

Knowles LM, Yang C, Osterman A, Smith JW.

J Biol Chem. 2008 Nov 14;283(46):31378-84. Epub 2008 Sep 16.PMID: 18796435 [PubMed - indexed for MEDLINE]Related articlesFree article

Long-term increases in lymphocytes and platelets in human T-lymphotropic virus type II infection.

Bartman MT, Kaidarova Z, Hirschkorn D, Sacher RA, Fridey J, Garratty G, Gibble J, Smith JW, Newman B, Yeo AE, Murphy EL; HTLV Outcomes Study (HOST) Investigators.

Blood. 2008 Nov 15;112(10):3995-4002. Epub 2008 Aug 28.PMID: 18755983 [PubMed - indexed for MEDLINE]Related articlesFree article

Nitrate attenuation in groundwater: a review of biogeochemical controlling processes.

Rivett MO, Buss SR, Morgan P, Smith JW, Bemment CD.

Water Res. 2008 Oct;42(16):4215-32. Epub 2008 Jul 23. Review.PMID: 18721996 [PubMed - indexed for MEDLINE]Related articles

Synthesis of novel beta-lactone inhibitors of fatty acid synthase.

Richardson RD, Ma G, Oyola Y, Zancanella M, Knowles LM, Cieplak P, Romo D, Smith JW.

J Med Chem. 2008 Sep 11;51(17):5285-96. Epub 2008 Aug 19.PMID: 18710210 [PubMed - indexed for MEDLINE]Related articles

Bioengineering a humanized acne microenvironment model: proteomics analysis of host responses to Propionibacterium acnes infection in vivo.

Nakatsuji T, Shi Y, Zhu W, Huang CP, Chen YR, Lee DY, Smith JW, Zouboulis CC, Gallo RL, Huang CM.

Proteomics. 2008 Aug;8(16):3406-15. Review.PMID: 18651708 [PubMed - indexed for MEDLINE]Related articlesFree article

WO03/062224 is an in vivo selective agonist at nicotinic beta4 receptors.

Greenhalgh CE, Smith JW, Clifton PG.

Pharmacol Biochem Behav. 2008 Nov;91(1):9-13. Epub 2008 Jun 13.PMID: 18590755 [PubMed - indexed for MEDLINE]Related articles

Substrate cleavage analysis of furin and related proprotein convertases. A comparative study.

Remacle AG, Shiryaev SA, Oh ES, Cieplak P, Srinivasan A, Wei G, Liddington RC, Ratnikov BI, Parent A, Desjardins R, Day R, Smith JW, Lebl M, Strongin AY.

J Biol Chem. 2008 Jul 25;283(30):20897-906. Epub 2008 May 27.PMID: 18505722 [PubMed - indexed for MEDLINE]Related articlesFree article

The two-component NS2B-NS3 proteinase represses DNA unwinding activity of the West Nile virus NS3 helicase.

Chernov AV, Shiryaev SA, Aleshin AE, Ratnikov BI, Smith JW, Liddington RC, Strongin AY.

J Biol Chem. 2008 Jun 20;283(25):17270-8. Epub 2008 Apr 28.PMID: 18442976 [PubMed - indexed for MEDLINE]Related articlesFree article

Selective dose escalation of chemoradiotherapy for locally advanced esophageal cancer.

Seung SK, Smith JW 2nd, Ross HJ.

Dis Esophagus. 2008;21(7):589-95. Epub 2008 Apr 22.PMID: 18430177 [PubMed - indexed for MEDLINE]Related articles

Competitive interactions of collagen and a jararhagin-derived disintegrin peptide with the integrin alpha2-I domain.

Lambert LJ, Bobkov AA, Smith JW, Marassi FM.

J Biol Chem. 2008 Jun 13;283(24):16665-72. Epub 2008 Apr 16.PMID: 18417478 [PubMed - indexed for MEDLINE]Related articlesFree article

Beta-lactam congeners of orlistat as inhibitors of fatty acid synthase.

Zhang W, Richardson RD, Chamni S, Smith JW, Romo D.

Bioorg Med Chem Lett. 2008 Apr 1;18(7):2491-4. Epub 2008 Feb 19.PMID: 18343106 [PubMed - indexed for MEDLINE]Related articles

Structure-based mutagenesis identifies important novel determinants of the NS2B cofactor of the West Nile virus two-component NS2B-NS3 proteinase.

Radichev I, Shiryaev SA, Aleshin AE, Ratnikov BI, Smith JW, Liddington RC, Strongin AY.

J Gen Virol. 2008 Mar;89(Pt 3):636-41.PMID: 18272753 [PubMed - indexed for MEDLINE]Related articlesFree article

HTS identifies novel and specific uncompetitive inhibitors of the two-component NS2B-NS3 proteinase of West Nile virus.

Johnston PA, Phillips J, Shun TY, Shinde S, Lazo JS, Huryn DM, Myers MC, Ratnikov BI, Smith JW, Su Y, Dahl R, Cosford ND, Shiryaev SA, Strongin AY.

Assay Drug Dev Technol. 2007 Dec;5(6):737-50.PMID: 18181690 [PubMed - indexed for MEDLINE]Related articles

Carbohydrate and carbohydrate + protein for cycling time-trial performance.

Osterberg KL, Zachwieja JJ, Smith JW.

J Sports Sci. 2008 Feb 1;26(3):227-33.PMID: 18074296 [PubMed - indexed for MEDLINE]Related articles

Quantitative proteomes and in vivo secretomes of progressive and regressive UV-induced fibrosarcoma tumor cells: mimicking tumor microenvironment using a dermis-based cell-trapped system linked to tissue chamber.

Shi Y, Elmets CA, Smith JW, Liu YT, Chen YR, Huang CP, Zhu W, Ananthaswamy HN, Gallo RL, Huang CM.

Proteomics. 2007 Dec;7(24):4589-600.PMID: 18022937 [PubMed - indexed for MEDLINE]Related articles

Hypercalcemia.

Shepard MM, Smith JW 3rd.

Am J Med Sci. 2007 Nov;334(5):381-5. Review.PMID: 18004092 [PubMed - indexed for MEDLINE]Related articles

Comparative metabolomics of breast cancer.

Yang C, Richardson AD, Smith JW, Osterman A.

Pac Symp Biocomput. 2007:181-92.PMID: 17990491 [PubMed - indexed for MEDLINE]Related articlesFree article

Proteolysis of the membrane type-1 matrix metalloproteinase prodomain: implications for a two-step proteolytic processing and activation.

Golubkov VS, Chekanov AV, Shiryaev SA, Aleshin AE, Ratnikov BI, Gawlik K, Radichev I, Motamedchaboki K, Smith JW, Strongin AY.

J Biol Chem. 2007 Dec 14;282(50):36283-91. Epub 2007 Oct 15.PMID: 17938169 [PubMed - indexed for MEDLINE]Related articlesFree article

Pulsed acceleration charge detection mass spectrometry: application to weighing electrosprayed droplets.

Mabbett SR, Zilch LW, Maze JT, Smith JW, Jarrold MF.

Anal Chem. 2007 Nov 15;79(22):8431-9. Epub 2007 Oct 11.PMID: 17929878 [PubMed]Related articles

A novel variant of ileal bile acid binding protein is up-regulated through nuclear factor-kappaB activation in colorectal adenocarcinoma.

Fang C, Dean J, Smith JW.

Cancer Res. 2007 Oct 1;67(19):9039-46.PMID: 17909007 [PubMed - indexed for MEDLINE]Related articlesFree article

The Oklahoma Thrombotic Thrombocytopenic Purpura-Hemolytic Uremic Syndrome Registry: a community service.

Johnson KK, Duvall D, Gilcher RO, Smith JW, Forsberg JE, Terrell DR, Vesely SK, George JN.

J Okla State Med Assoc. 2007 Jul;100(7):273-8.PMID: 17896615 [PubMed - indexed for MEDLINE]Related articles

role of altruistic behavior, empathetic concern, and social responsibility motivation in blood donation behavior.

Steele WR, Schreiber GB, Guiltinan A, Nass C, Glynn SA, Wright DJ, Kessler D, Schlumpf KS, Tu Y, Smith JW, Garratty G; Retrovirus Epidemiology Donor Study.

Transfusion. 2008 Jan;48(1):43-54. Epub 2007 Sep 24.PMID: 17894795 [PubMed - indexed for MEDLINE]Related articles

Central carbon metabolism in the progression of mammary carcinoma.

Richardson AD, Yang C, Osterman A, Smith JW.

Breast Cancer Res Treat. 2008 Jul;110(2):297-307. Epub 2007 Sep 19.PMID: 17879159 [PubMed - indexed for MEDLINE]Related articlesFree article

Profiling constitutive proteolytic events in vivo.

Timmer JC, Enoksson M, Wildfang E, Zhu W, Igarashi Y, Denault JB, Ma Y, Dummitt B, Chang YH, Mast AE, Eroshkin A, Smith JW, Tao WA, Salvesen GS.

Biochem J. 2007 Oct 1;407(1):41-8.PMID: 17650073 [PubMed - indexed for MEDLINE]Related articlesFree article

Novel antagonists of the thioesterase domain of human fatty acid synthase.

Richardson RD, Smith JW.

Mol Cancer Ther. 2007 Jul;6(7):2120-6.PMID: 17620441 [PubMed - indexed for MEDLINE]Related articlesFree article