PubMed

Mycobacterium avium subsp. Paratuberculosis (MAP) as a modifying factor in Crohn's disease.

Sibartie S, Scully P, Keohane J, O'Neill S, O'Mahony J, O'Hanlon D, Kirwan WO, O'Mahony L, Shanahan F.

Inflamm Bowel Dis. 2009 Oct 12. [Epub ahead of print]PMID: 19824071 [PubMed - as supplied by publisher]Related articles

Modulation of pathogen-induced CCL20 secretion from HT-29 human intestinal epithelial cells by commensal bacteria.

Sibartie S, O'Hara AM, Ryan J, Fanning A, O'Mahony J, O'Neill S, Sheil B, O'Mahony L, Shanahan F.

BMC Immunol. 2009 Oct 8;10:54.PMID: 19814810 [PubMed - in process]Related articlesFree article

Bacterial signalling overrides cytokine signalling and modifies dendritic cell differentiation.

Davies JM, Sheil B, Shanahan F.

Immunology. 2009 Sep;128(1 Suppl):e805-15. Epub 2009 Mar 23.PMID: 19740342 [PubMed - in process]Related articles

A Molecular Analysis of Fecal and Mucosal Bacterial Communities in Irritable Bowel Syndrome.

Codling C, O'Mahony L, Shanahan F, Quigley EM, Marchesi JR.

Dig Dis Sci. 2009 Aug 20. [Epub ahead of print]PMID: 19693670 [PubMed - as supplied by publisher]Related articles

Loss of vagal anti-inflammatory effect: in vivo visualization and adoptive transfer.

O'Mahony C, van der Kleij H, Bienenstock J, Shanahan F, O'Mahony L.

Am J Physiol Regul Integr Comp Physiol. 2009 Oct;297(4):R1118-26. Epub 2009 Aug 12.PMID: 19675277 [PubMed - indexed for MEDLINE]Related articles

Involvement of T helper type 17 and regulatory T cell activity in Citrobacter rodentium invasion and inflammatory damage.

Symonds EL, Riedel CU, O'Mahony D, Lapthorne S, O'Mahony L, Shanahan F.

Clin Exp Immunol. 2009 Jul;157(1):148-54.PMID: 19659780 [PubMed - indexed for MEDLINE]Related articles

Sport and recreation-related injuries and fracture occurrence among emergency department attendees: implications for exercise prescription and injury prevention.

Falvey EC, Eustace J, Whelan B, Molloy MS, Cusack SP, Shanahan F, Molloy MG.

Emerg Med J. 2009 Aug;26(8):590-5.PMID: 19625558 [PubMed - indexed for MEDLINE]Related articles

Undiagnosed maternal celiac disease in pregnancy and an increased risk of fetal growth restriction.

McCarthy FP, Khashan AS, Quigley E, Shanahan F, O'Regan P, Cronin C, Kenny L.

J Clin Gastroenterol. 2009 Sep;43(8):792-3. No abstract available. PMID: 19561528 [PubMed - indexed for MEDLINE]Related articles

Portrait of a canine probiotic Bifidobacterium--from gut to gut.

O'Mahony D, Murphy KB, MacSharry J, Boileau T, Sunvold G, Reinhart G, Kiely B, Shanahan F, O'Mahony L.

Vet Microbiol. 2009 Oct 20;139(1-2):106-12. Epub 2009 May 19.PMID: 19523775 [PubMed - indexed for MEDLINE]Related articles

Therapeutic implications of manipulating and mining the microbiota.

Shanahan F.

J Physiol. 2009 Sep 1;587(Pt 17):4175-9. Epub 2009 Jun 8. Review.PMID: 19505978 [PubMed - indexed for MEDLINE]Related articles

Culture-independent analysis of desulfovibrios in the human distal colon of healthy, colorectal cancer and polypectomized individuals.

Scanlan PD, Shanahan F, Marchesi JR.

FEMS Microbiol Ecol. 2009 Aug;69(2):213-21. Epub 2009 May 9.PMID: 19496818 [PubMed - indexed for MEDLINE]Related articles

Asymptomatic carriage of Clostridium difficile in an Irish continuing care institution for the elderly: prevalence and characteristics.

Ryan J, Murphy C, Twomey C, Paul Ross R, Rea MC, Macsharry J, Sheil B, Shanahan F.

Ir J Med Sci. 2009 Jun 4. [Epub ahead of print]PMID: 19495833 [PubMed - as supplied by publisher]Related articles

Cogan's syndrome: present and future directions.

Murphy G, Sullivan MO, Shanahan F, Harney S, Molloy M.

Rheumatol Int. 2009 Aug;29(10):1117-21. Epub 2009 May 27. Review.PMID: 19471934 [PubMed - indexed for MEDLINE]Related articles

The language of medicine: words as servants and scoundrels.

Quigley EM, Shanahan F.

Clin Med. 2009 Apr;9(2):131-5. Review.PMID: 19435117 [PubMed - in process]Related articles

Metabolic activity of the enteric microbiota influences the fatty acid composition of murine and porcine liver and adipose tissues.

Wall R, Ross RP, Shanahan F, O'Mahony L, O'Mahony C, Coakley M, Hart O, Lawlor P, Quigley EM, Kiely B, Fitzgerald GF, Stanton C.

Am J Clin Nutr. 2009 May;89(5):1393-401. Epub 2009 Apr 8.PMID: 19357220 [PubMed - indexed for MEDLINE]Related articles

The evolving epidemiology of inflammatory bowel disease.

Shanahan F, Bernstein CN.

Curr Opin Gastroenterol. 2009 Jul;25(4):301-5. Review.PMID: 19349861 [PubMed - indexed for MEDLINE]Related articles

The vexed relationship between Clostridium difficile and inflammatory bowel disease: an assessment of carriage in an outpatient setting among patients in remission.

Clayton EM, Rea MC, Shanahan F, Quigley EM, Kiely B, Hill C, Ross RP.

Am J Gastroenterol. 2009 May;104(5):1162-9. Epub 2009 Mar 24.PMID: 19319128 [PubMed - indexed for MEDLINE]Related articles

Microbiomic analysis of the bifidobacterial population in the human distal gut.

Turroni F, Marchesi JR, Foroni E, Gueimonde M, Shanahan F, Margolles A, van Sinderen D, Ventura M.

ISME J. 2009 Jun;3(6):745-51. Epub 2009 Mar 19.PMID: 19295640 [PubMed - indexed for MEDLINE]Related articles

Coeliac disease. Don't forget increased risk of fetal growth restriction.

McCarthy FP, Khashan AS, Quigley E, Shanahan F, Kenny L.

BMJ. 2009 Mar 17;338:b1069. doi: 10.1136/bmj.b1069. No abstract available. PMID: 19293210 [PubMed - indexed for MEDLINE]Related articles

Evaluation of colostrum-derived human mammary-associated serum amyloid A3 (M-SAA3) protein and peptide derivatives for the prevention of enteric infection: in vitro and in murine models of intestinal disease.

Gardiner GE, O'Flaherty S, Casey PG, Weber A, McDonald TL, Cronin M, Hill C, Ross RP, Gahan CG, Shanahan F.

FEMS Immunol Med Microbiol. 2009 Apr;55(3):404-13. Epub 2009 Feb 11.PMID: 19220465 [PubMed - indexed for MEDLINE]Related articles

Replication stress activates DNA polymerase alpha-associated Chk1.

Taricani L, Shanahan F, Parry D.

Cell Cycle. 2009 Feb 1;8(3):482-9. Epub 2009 Feb 19.PMID: 19177015 [PubMed - indexed for MEDLINE]Related articlesFree article

Exploring the diversity of the bifidobacterial population in the human intestinal tract.

Turroni F, Foroni E, Pizzetti P, Giubellini V, Ribbera A, Merusi P, Cagnasso P, Bizzarri B, de'Angelis GL, Shanahan F, van Sinderen D, Ventura M.

Appl Environ Microbiol. 2009 Mar;75(6):1534-45. Epub 2009 Jan 23.PMID: 19168652 [PubMed - indexed for MEDLINE]Related articlesFree article

James Joyce and gastroenterology.

Shanahan F, Quigley EM.

Clin Med. 2008 Dec;8(6):632-3. No abstract available. PMID: 19149288 [PubMed - indexed for MEDLINE]Related articles

Metabolic activity of probiotics-oxalate degradation.

Murphy C, Murphy S, O'Brien F, O'Donoghue M, Boileau T, Sunvold G, Reinhart G, Kiely B, Shanahan F, O'Mahony L.

Vet Microbiol. 2009 Apr 14;136(1-2):100-7. Epub 2008 Oct 15.PMID: 19028028 [PubMed - indexed for MEDLINE]Related articles

From bugs to drugs--mining the gut microbiota.

Shanahan F.

Curr Gastroenterol Rep. 2008 Dec;10(6):515-6. No abstract available. PMID: 19006603 [PubMed - indexed for MEDLINE]Related articles

Tryptophan catabolism in females with irritable bowel syndrome: relationship to interferon-gamma, severity of symptoms and psychiatric co-morbidity.

Fitzgerald P, Cassidy Eugene M, Clarke G, Scully P, Barry S, Quigley Eamonn MM, Shanahan F, Cryan J, Dinan Timothy G.

Neurogastroenterol Motil. 2008 Dec;20(12):1291-7. Epub 2008 Sep 24.PMID: 18823288 [PubMed - indexed for MEDLINE]Related articles

Are patients with IBD knowledgeable about the risks of their medications?

Keohane J, Shanahan F.

Inflamm Bowel Dis. 2008 Oct;14 Suppl 2:S70-1. No abstract available. Erratum in: Inflamm Bowel Dis. 2009 Sep;15(9):1438-47. PMID: 18816750 [PubMed - indexed for MEDLINE]Related articlesFree article

Enhanced cholinergic-mediated increase in the pro-inflammatory cytokine IL-6 in irritable bowel syndrome: role of muscarinic receptors.

Dinan TG, Clarke G, Quigley EM, Scott LV, Shanahan F, Cryan J, Cooney J, Keeling PW.

Am J Gastroenterol. 2008 Oct;103(10):2570-6. Epub 2008 Sep 10.PMID: 18785949 [PubMed - indexed for MEDLINE]Related articles

Mucosal cytokine imbalance in irritable bowel syndrome.

Macsharry J, O'Mahony L, Fanning A, Bairead E, Sherlock G, Tiesman J, Fulmer A, Kiely B, Dinan TG, Shanahan F, Quigley EM.

Scand J Gastroenterol. 2008;43(12):1467-76.PMID: 18752146 [PubMed - indexed for MEDLINE]Related articles

Commensal-induced regulatory T cells mediate protection against pathogen-stimulated NF-kappaB activation.

O'Mahony C, Scully P, O'Mahony D, Murphy S, O'Brien F, Lyons A, Sherlock G, MacSharry J, Kiely B, Shanahan F, O'Mahony L.

PLoS Pathog. 2008 Aug 1;4(8):e1000112.PMID: 18670628 [PubMed - indexed for MEDLINE]Related articlesFree article

Protective effects of Lactobacillus reuteri and Bifidobacterium infantis in murine models for colitis do not involve the vagus nerve.

van der Kleij H, O'Mahony C, Shanahan F, O'Mahony L, Bienenstock J.

Am J Physiol Regul Integr Comp Physiol. 2008 Oct;295(4):R1131-7. Epub 2008 Jul 30.PMID: 18667710 [PubMed - indexed for MEDLINE]Related articles

Prostaglandin E2 stimulates Fas ligand expression via the EP1 receptor in colon cancer cells.

O'Callaghan G, Kelly J, Shanahan F, Houston A.

Br J Cancer. 2008 Aug 5;99(3):502-12. Epub 2008 Jul 22.PMID: 18648368 [PubMed - indexed for MEDLINE]Related articlesFree article

Disorders of a modern lifestyle: reconciling the epidemiology of inflammatory bowel diseases.

Bernstein CN, Shanahan F.

Gut. 2008 Sep;57(9):1185-91. Epub 2008 May 30. Review. No abstract available. PMID: 18515412 [PubMed - indexed for MEDLINE]Related articles

Human methanogen diversity and incidence in healthy and diseased colonic groups using mcrA gene analysis.

Scanlan PD, Shanahan F, Marchesi JR.

BMC Microbiol. 2008 May 20;8:79.PMID: 18492229 [PubMed - indexed for MEDLINE]Related articlesFree article

Bad language in gastroenterology.

Shanahan F, Quigley EM.

Curr Gastroenterol Rep. 2008 Apr;10(2):91-3. No abstract available. PMID: 18462592 [PubMed - indexed for MEDLINE]Related articles

Crohn's disease: factors associated with exposure to high levels of diagnostic radiation.

Desmond AN, O'Regan K, Curran C, McWilliams S, Fitzgerald T, Maher MM, Shanahan F.

Gut. 2008 Nov;57(11):1524-9. Epub 2008 Apr 28.PMID: 18443021 [PubMed - indexed for MEDLINE]Related articles

High levels of Lymphotoxin-Beta (LT-Beta) gene expression in rheumatoid arthritis synovium: clinical and cytokine correlations.

O'Rourke KP, O'Donoghue G, Adams C, Mulcahy H, Molloy C, Silke C, Molloy M, Shanahan F, O'Gara F.

Rheumatol Int. 2008 Aug;28(10):979-86. Epub 2008 Apr 1.PMID: 18379788 [PubMed - indexed for MEDLINE]Related articles

Culture-independent analysis of the gut microbiota in colorectal cancer and polyposis.

Scanlan PD, Shanahan F, Clune Y, Collins JK, O'Sullivan GC, O'Riordan M, Holmes E, Wang Y, Marchesi JR.

Environ Microbiol. 2008 Mar;10(3):789-98. Erratum in: Environ Microbiol. 2008 May;10(5):1382. PMID: 18237311 [PubMed - indexed for MEDLINE]Related articles

Evidence of an enhanced central 5HT response in irritable bowel syndrome and in the rat maternal separation model.

O'Mahony S, Chua AS, Quigley EM, Clarke G, Shanahan F, Keeling PW, Dinan TG.

Neurogastroenterol Motil. 2008 Jun;20(6):680-8. Epub 2008 Jan 13.PMID: 18194152 [PubMed - indexed for MEDLINE]Related articles

Drug interactions in inflammatory bowel disease.

Irving PM, Shanahan F, Rampton DS.

Am J Gastroenterol. 2008 Jan;103(1):207-19; quiz 206, 220. Epub 2007 Dec 11. Review.PMID: 18076738 [PubMed - indexed for MEDLINE]Related articles

Pyrazolo[1,5-a]pyrimidines as orally available inhibitors of cyclin-dependent kinase 2.

Paruch K, Dwyer MP, Alvarez C, Brown C, Chan TY, Doll RJ, Keertikar K, Knutson C, McKittrick B, Rivera J, Rossman R, Tucker G, Fischmann TO, Hruza A, Madison V, Nomeir AA, Wang Y, Lees E, Parry D, Sgambellone N, Seghezzi W, Schultz L, Shanahan F, Wiswell D, Xu X, Zhou Q, James RA, Paradkar VM, Park H, Rokosz LR, Stauffer TM, Guzi TJ.

Bioorg Med Chem Lett. 2007 Nov 15;17(22):6220-3. Epub 2007 Sep 8.PMID: 17904841 [PubMed - indexed for MEDLINE]Related articles

Versatile templates for the development of novel kinase inhibitors: Discovery of novel CDK inhibitors.

Dwyer MP, Paruch K, Alvarez C, Doll RJ, Keertikar K, Duca J, Fischmann TO, Hruza A, Madison V, Lees E, Parry D, Seghezzi W, Sgambellone N, Shanahan F, Wiswell D, Guzi TJ.

Bioorg Med Chem Lett. 2007 Nov 15;17(22):6216-9. Epub 2007 Sep 8.PMID: 17904366 [PubMed - indexed for MEDLINE]Related articles

Chronic gastroenterologic and hepatic disorders.

Shanahan F.

Best Pract Res Clin Gastroenterol. 2007;21(5):753-4. No abstract available. PMID: 17889805 [PubMed - indexed for MEDLINE]Related articles

Steroid allergy in patients with inflammatory bowel disease.

Malik M, Tobin AM, Shanahan F, O'Morain C, Kirby B, Bourke J.

Br J Dermatol. 2007 Nov;157(5):967-9. Epub 2007 Sep 13.PMID: 17854354 [PubMed - indexed for MEDLINE]Related articles

The normal intestinal microbiota.

Marchesi J, Shanahan F.

Curr Opin Infect Dis. 2007 Oct;20(5):508-13. Review.PMID: 17762785 [PubMed - indexed for MEDLINE]Related articles

Irritable bowel syndrome: shifting the focus toward the gut microbiota.

Shanahan F.

Gastroenterology. 2007 Jul;133(1):340-2. No abstract available. PMID: 17631152 [PubMed - indexed for MEDLINE]Related articles

Antimicrobial activity of lacticin 3,147 against clinical Clostridium difficile strains.

Rea MC, Clayton E, O'Connor PM, Shanahan F, Kiely B, Ross RP, Hill C.

J Med Microbiol. 2007 Jul;56(Pt 7):940-6.PMID: 17577060 [PubMed - indexed for MEDLINE]Related articlesFree article

Colitis-associated cancer and dysplasia surveillance: an opposing perspective.

Shanahan F.

Curr Gastroenterol Rep. 2007 Jun;9(3):175-6. No abstract available. PMID: 17511913 [PubMed - indexed for MEDLINE]Related articles

Salmonella typhimurium stimulation combined with tumour-derived heat shock proteins induces potent dendritic cell anti-tumour responses in a murine model.

Shilling DA, Smith MJ, Tyther R, Sheehan D, England K, Kavanagh EG, Redmond HP, Shanahan F, O'Mahony L.

Clin Exp Immunol. 2007 Jul;149(1):109-16. Epub 2007 Apr 25.PMID: 17459080 [PubMed - indexed for MEDLINE]Related articlesFree article

Gut microbiota: mining for therapeutic potential.

O'Hara AM, Shanahan F.

Clin Gastroenterol Hepatol. 2007 Mar;5(3):274-84. Review.PMID: 17368226 [PubMed - indexed for MEDLINE]Related articles