PubMed

Population seroprevalence of hepatitis E virus antibodies in rural Bangladesh.

Labrique AB, Zaman K, Hossain Z, Saha P, Yunus M, Hossain A, Ticehurst J, Nelson KE.

Am J Trop Med Hyg. 2009 Nov;81(5):875-81.PMID: 19861625 [PubMed - indexed for MEDLINE]Related articles

Comment on particle tracking model for colloid transport near planar surfaces covered with spherical asperities.

Nelson KE, Ginn TR.

Langmuir. 2009 Nov 3;25(21):12835-6. No abstract available. PMID: 19856997 [PubMed - in process]Related articles

Genomics. Genome project standards in a new era of sequencing.

Chain PS, Grafham DV, Fulton RS, Fitzgerald MG, Hostetler J, Muzny D, Ali J, Birren B, Bruce DC, Buhay C, Cole JR, Ding Y, Dugan S, Field D, Garrity GM, Gibbs R, Graves T, Han CS, Harrison SH, Highlander S, Hugenholtz P, Khouri HM, Kodira CD, Kolker E, Kyrpides NC, Lang D, Lapidus A, Malfatti SA, Markowitz V, Metha T, Nelson KE, Parkhill J, Pitluck S, Qin X, Read TD, Schmutz J, Sozhamannan S, Sterk P, Strausberg RL, Sutton G, Thomson NR, Tiedje JM, Weinstock G, Wollam A; Genomic Standards Consortium Human Microbiome Project Jumpstart Consortium, Detter JC.

Science. 2009 Oct 9;326(5950):236-7. No abstract available. PMID: 19815760 [PubMed - indexed for MEDLINE]Related articles

The FibRumBa Database: A Resource for Biologists with Interests in Gastrointestinal Microbial Ecology, Plant Biomass Degradation, and Anaerobic Microbiology.

Morrison M, Daugherty SC, Nelson WC, Davidsen T, Nelson KE; The North American Consortium for Fibrolytic Ruminal Bacteria.

Microb Ecol. 2009 Jul 17. [Epub ahead of print] No abstract available. PMID: 19609599 [PubMed - as supplied by publisher]Related articles

Dynamic bioprocessing and microfluidic transport control with smart magnetic nanoparticles in laminar-flow devices.

Lai JJ, Nelson KE, Nash MA, Hoffman AS, Yager P, Stayton PS.

Lab Chip. 2009 Jul 21;9(14):1997-2002. Epub 2009 Mar 16.PMID: 19568666 [PubMed - indexed for MEDLINE]Related articles

Hepatitis B virus infection and hepatocellular carcinoma among parous Taiwanese women: nationwide cohort study.

Fwu CW, Chien YC, Kirk GD, Nelson KE, You SL, Kuo HS, Feinleib M, Chen CJ.

J Natl Cancer Inst. 2009 Jul 15;101(14):1019-27. Epub 2009 Jun 17.PMID: 19535774 [PubMed - indexed for MEDLINE]Related articles

Epidemiology of hepatitis E virus in the United States: results from the Third National Health and Nutrition Examination Survey, 1988-1994.

Kuniholm MH, Purcell RH, McQuillan GM, Engle RE, Wasley A, Nelson KE.

J Infect Dis. 2009 Jul 1;200(1):48-56.PMID: 19473098 [PubMed - indexed for MEDLINE]Related articlesFree article

Incubation periods of acute respiratory viral infections: a systematic review.

Lessler J, Reich NG, Brookmeyer R, Perl TM, Nelson KE, Cummings DA.

Lancet Infect Dis. 2009 May;9(5):291-300. Review.PMID: 19393959 [PubMed - indexed for MEDLINE]Related articles

Modeling of a competitive microfluidic heterogeneous immunoassay: sensitivity of the assay response to varying system parameters.

Fu E, Nelson KE, Ramsey SA, Foley JO, Helton K, Yager P.

Anal Chem. 2009 May 1;81(9):3407-13.PMID: 19361154 [PubMed - indexed for MEDLINE]Related articles

On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales.

Zhaxybayeva O, Swithers KS, Lapierre P, Fournier GP, Bickhart DM, DeBoy RT, Nelson KE, Nesbø CL, Doolittle WF, Gogarten JP, Noll KM.

Proc Natl Acad Sci U S A. 2009 Apr 7;106(14):5865-70. Epub 2009 Mar 23.PMID: 19307556 [PubMed - indexed for MEDLINE]Related articlesFree article

Outcome of noncardiac surgery in patients with ventricular assist devices.

Stehlik J, Nelson DM, Kfoury AG, Reid BB, Clayson SE, Nelson KE, Christensen BJ, Renlund DG, Movsesian MA, Cowley CG, Smith HK, Rasmusson BY, Long JW.

Am J Cardiol. 2009 Mar 1;103(5):709-12. Epub 2009 Jan 15.PMID: 19231338 [PubMed - indexed for MEDLINE]Related articles

Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils.

Ward NL, Challacombe JF, Janssen PH, Henrissat B, Coutinho PM, Wu M, Xie G, Haft DH, Sait M, Badger J, Barabote RD, Bradley B, Brettin TS, Brinkac LM, Bruce D, Creasy T, Daugherty SC, Davidsen TM, DeBoy RT, Detter JC, Dodson RJ, Durkin AS, Ganapathy A, Gwinn-Giglio M, Han CS, Khouri H, Kiss H, Kothari SP, Madupu R, Nelson KE, Nelson WC, Paulsen I, Penn K, Ren Q, Rosovitz MJ, Selengut JD, Shrivastava S, Sullivan SA, Tapia R, Thompson LS, Watkins KL, Yang Q, Yu C, Zafar N, Zhou L, Kuske CR.

Appl Environ Microbiol. 2009 Apr;75(7):2046-56. Epub 2009 Feb 5.PMID: 19201974 [PubMed - indexed for MEDLINE]Related articlesFree article

Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases.

Brulc JM, Antonopoulos DA, Miller ME, Wilson MK, Yannarell AC, Dinsdale EA, Edwards RE, Frank ED, Emerson JB, Wacklin P, Coutinho PM, Henrissat B, Nelson KE, White BA.

Proc Natl Acad Sci U S A. 2009 Feb 10;106(6):1948-53. Epub 2009 Jan 30.PMID: 19181843 [PubMed - indexed for MEDLINE]Related articlesFree article

Prevalence of HCV and genotypes distribution in general population of Georgia.

Sharvadze L, Nelson KE, Imnadze P, Karchava M, Tsertsvadze T.

Georgian Med News. 2008 Dec;(165):71-7.PMID: 19124921 [PubMed - indexed for MEDLINE]Related articles

Acute/recent HCV infection. Clinical course, viral replication kunetic and disease outcome.

Tsertsvadze T, Sharvadze L, Dzigua L, Dolmazashvili E, Nelson KE.

Georgian Med News. 2008 Dec;(165):43-9.PMID: 19124916 [PubMed - indexed for MEDLINE]Related articles

Distribution of HIV-1 resistant polymorphisms among HIV infected patients in Georgia.

Karchava M, Nelson KE, Gochitashvili N, Dvali N, Tsertsvadze T.

Georgian Med News. 2008 Dec;(165):28-33.PMID: 19124913 [PubMed - indexed for MEDLINE]Related articles

Assessment of a self-deferral form for screening blood donors, Chiang Mai University Hospital, Thailand.

Thaikruea L, Nantachit N, Leetrakool N, Fongsatitkul L, Sompan P, Heaton A, Nelson KE.

Southeast Asian J Trop Med Public Health. 2008 Sep;39(5):906-12.PMID: 19058588 [PubMed - indexed for MEDLINE]Related articles

Promoting academic and social-emotional school readiness: the head start REDI program.

Bierman KL, Domitrovich CE, Nix RL, Gest SD, Welsh JA, Greenberg MT, Blair C, Nelson KE, Gill S.

Child Dev. 2008 Nov-Dec;79(6):1802-17.PMID: 19037951 [PubMed - indexed for MEDLINE]Related articles

Of organ meats and hepatitis E virus: one part of a larger puzzle is solved.

Kuniholm MH, Nelson KE.

J Infect Dis. 2008 Dec 15;198(12):1727-8. No abstract available. PMID: 18983247 [PubMed - indexed for MEDLINE]Related articles

Conditioning saliva for use in a microfluidic biosensor.

Helton KL, Nelson KE, Fu E, Yager P.

Lab Chip. 2008 Nov;8(11):1847-51. Epub 2008 Oct 1.PMID: 18941684 [PubMed - indexed for MEDLINE]Related articles

Regulation of the xylan-degrading apparatus of Cellvibrio japonicus by a novel two-component system.

Emami K, Topakas E, Nagy T, Henshaw J, Jackson KA, Nelson KE, Mongodin EF, Murray JW, Lewis RJ, Gilbert HJ.

J Biol Chem. 2009 Jan 9;284(2):1086-96. Epub 2008 Oct 15.PMID: 18922794 [PubMed - indexed for MEDLINE]Related articles

HIV vaccine preparedness studies in the non-organization for economic co-operation and development (non-OECD) countries.

Dhalla S, Nelson KE, Singer J, Poole G.

AIDS Care. 2009 Mar;21(3):335-48. Review.PMID: 18781449 [PubMed - indexed for MEDLINE]Related articles

Hydrogenomics of the extremely thermophilic bacterium Caldicellulosiruptor saccharolyticus.

van de Werken HJ, Verhaart MR, VanFossen AL, Willquist K, Lewis DL, Nichols JD, Goorissen HP, Mongodin EF, Nelson KE, van Niel EW, Stams AJ, Ward DE, de Vos WM, van der Oost J, Kelly RM, Kengen SW.

Appl Environ Microbiol. 2008 Nov;74(21):6720-9. Epub 2008 Sep 5.PMID: 18776029 [PubMed - indexed for MEDLINE]Related articlesFree article

Extensive genome rearrangements and multiple horizontal gene transfers in a population of pyrococcus isolates from Vulcano Island, Italy.

White JR, Escobar-Paramo P, Mongodin EF, Nelson KE, DiRuggiero J.

Appl Environ Microbiol. 2008 Oct;74(20):6447-51. Epub 2008 Aug 22.PMID: 18723649 [PubMed - indexed for MEDLINE]Related articlesFree article

Comparative metagenomics reveals host specific metavirulomes and horizontal gene transfer elements in the chicken cecum microbiome.

Qu A, Brulc JM, Wilson MK, Law BF, Theoret JR, Joens LA, Konkel ME, Angly F, Dinsdale EA, Edwards RA, Nelson KE, White BA.

PLoS One. 2008 Aug 13;3(8):e2945.PMID: 18698407 [PubMed - indexed for MEDLINE]Related articlesFree article

Not all injection drug users are created equal: heterogeneity of HIV, hepatitis C virus, and hepatitis B virus infection in Georgia.

Kuniholm MH, Aladashvili M, Del Rio C, Stvilia K, Gabelia N, Chitale RA, Tsertsvadze T, Nelson KE.

Subst Use Misuse. 2008;43(10):1424-37.PMID: 18696377 [PubMed - indexed for MEDLINE]Related articles

Insights into plant cell wall degradation from the genome sequence of the soil bacterium Cellvibrio japonicus.

DeBoy RT, Mongodin EF, Fouts DE, Tailford LE, Khouri H, Emerson JB, Mohamoud Y, Watkins K, Henrissat B, Gilbert HJ, Nelson KE.

J Bacteriol. 2008 Aug;190(15):5455-63. Epub 2008 Jun 13.PMID: 18556790 [PubMed - indexed for MEDLINE]Related articlesFree article

Improving outcomes with long-term "destination" therapy using left ventricular assist devices.

Long JW, Healy AH, Rasmusson BY, Cowley CG, Nelson KE, Kfoury AG, Clayson SE, Reid BB, Moore SA, Blank DU, Renlund DG.

J Thorac Cardiovasc Surg. 2008 Jun;135(6):1353-60; discussion 1360-1.PMID: 18544385 [PubMed - indexed for MEDLINE]Related articles

Regional and temporal variation in American Red Cross blood donations, 1995 to 2005.

Crawford SO, Reich NG, An MW, Brookmeyer R, Louis TA, Nelson KE, Notari EP, Trouern-Trend J, Zou S.

Transfusion. 2008 Aug;48(8):1576-83. Epub 2008 Jul 22.PMID: 18503618 [PubMed - indexed for MEDLINE]Related articles

Confirmatory testing of hepatitis C virus-positive enzyme immunoassay results in limited-resource countries: should it be attempted?

Nelson KE, Shan H.

Transfusion. 2008 Jun;48(6):1239-44. Epub 2008 Mar 25. No abstract available. PMID: 18373499 [PubMed - indexed for MEDLINE]Related articles

Occult hepatitis C virus infection during an outbreak in a hemodialysis unit in Thailand.

Thongsawat S, Maneekarn N, Kuniholm MH, Pantip C, Thungsuputi A, Lumlertkul D, Bannachak D, Nelson KE.

J Med Virol. 2008 May;80(5):808-15.PMID: 18360894 [PubMed - indexed for MEDLINE]Related articles

Functional metagenomic profiling of nine biomes.

Dinsdale EA, Edwards RA, Hall D, Angly F, Breitbart M, Brulc JM, Furlan M, Desnues C, Haynes M, Li L, McDaniel L, Moran MA, Nelson KE, Nilsson C, Olson R, Paul J, Brito BR, Ruan Y, Swan BK, Stevens R, Valentine DL, Thurber RV, Wegley L, White BA, Rohwer F.

Nature. 2008 Apr 3;452(7187):629-32. Epub 2008 Mar 12. Erratum in: Nature. 2008 Oct 9;455(7214):830. PMID: 18337718 [PubMed - indexed for MEDLINE]Related articles

Population diversity and dynamics of Streptococcus mitis, Streptococcus oralis, and Streptococcus infantis in the upper respiratory tracts of adults, determined by a nonculture strategy.

Bek-Thomsen M, Tettelin H, Hance I, Nelson KE, Kilian M.

Infect Immun. 2008 May;76(5):1889-96. Epub 2008 Mar 3.PMID: 18316382 [PubMed - indexed for MEDLINE]Related articlesFree article

Body shape and metabolic abnormalities in Thai HIV-infected patients.

Homsanit M, Nelson KE, Sonjai A, Anekthananon T, Suwanagool S, Cofrancesco J Jr.

AIDS Res Hum Retroviruses. 2007 Nov;23(11):1314-21.PMID: 18184072 [PubMed - indexed for MEDLINE]Related articles

Estimating 'net' HIV-related mortality and the importance of background mortality rates.

Marston M, Todd J, Glynn JR, Nelson KE, Rangsin R, Lutalo T, Urassa M, Biraro S, Van der Paal L, Sonnenberg P, Zaba B.

AIDS. 2007 Nov;21 Suppl 6:S65-71.PMID: 18032941 [PubMed - indexed for MEDLINE]Related articles

Time from HIV seroconversion to death: a collaborative analysis of eight studies in six low and middle-income countries before highly active antiretroviral therapy.

Todd J, Glynn JR, Marston M, Lutalo T, Biraro S, Mwita W, Suriyanon V, Rangsin R, Nelson KE, Sonnenberg P, Fitzgerald D, Karita E, Zaba B.

AIDS. 2007 Nov;21 Suppl 6:S55-63.PMID: 18032940 [PubMed - indexed for MEDLINE]Related articles

Survival of blood donors and their spouses with HIV-1 subtype E (CRF01 A_E) infection in northern Thailand, 1992-2007.

Nelson KE, Costello C, Suriyanon V, Sennun S, Duerr A.

AIDS. 2007 Nov;21 Suppl 6:S47-54.PMID: 18032938 [PubMed - indexed for MEDLINE]Related articles

The natural history of HIV-1 subtype E infection in young men in Thailand with up to 14 years of follow-up.

Rangsin R, Piyaraj P, Sirisanthana T, Sirisopana N, Short O, Nelson KE.

AIDS. 2007 Nov;21 Suppl 6:S39-46.PMID: 18032937 [PubMed - indexed for MEDLINE]Related articles

Genomic differences between Fibrobacter succinogenes S85 and Fibrobacter intestinalis DR7, identified by suppression subtractive hybridization.

Qi M, Nelson KE, Daugherty SC, Nelson WC, Hance IR, Morrison M, Forsberg CW.

Appl Environ Microbiol. 2008 Feb;74(4):987-93. Epub 2007 Dec 21.PMID: 18156324 [PubMed - indexed for MEDLINE]Related articlesFree article

Evaluation of a multiplex human immunodeficiency virus-1, hepatitis C virus, and hepatitis B virus nucleic acid testing assay to detect viremic blood donors in northern Thailand.

Nantachit N, Thaikruea L, Thongsawat S, Leetrakool N, Fongsatikul L, Sompan P, Fong YL, Nichols D, Ziermann R, Ness P, Nelson KE.

Transfusion. 2007 Oct;47(10):1803-8.PMID: 17880604 [PubMed - indexed for MEDLINE]Related articles

Viral infections and lower urinary tract symptoms in the third national health and nutrition examination survey.

Sutcliffe S, Rohrmann S, Giovannucci E, Nelson KE, De Marzo AM, Isaacs WB, Nelson WG, Platz EA.

J Urol. 2007 Nov;178(5):2181-5. Epub 2007 Sep 17.PMID: 17870113 [PubMed - indexed for MEDLINE]Related articles

Risk factors and algorithms to identify hepatitis C, hepatitis B, and HIV among Georgian tuberculosis patients.

Kuniholm MH, Mark J, Aladashvili M, Shubladze N, Khechinashvili G, Tsertsvadze T, del Rio C, Nelson KE.

Int J Infect Dis. 2008 Jan;12(1):51-6. Epub 2007 Jul 23.PMID: 17644020 [PubMed - indexed for MEDLINE]Related articlesFree article

Prevalence and risks of allosensitization in HeartMate left ventricular assist device recipients: the impact of leukofiltered cellular blood product transfusions.

Drakos SG, Stringham JC, Long JW, Gilbert EM, Fuller TC, Campbell BK, Horne BD, Hagan ME, Nelson KE, Lindblom JM, Meldrum PA, Carlson JF, Moore SA, Kfoury AG, Renlund DG.

J Thorac Cardiovasc Surg. 2007 Jun;133(6):1612-9.PMID: 17532964 [PubMed - indexed for MEDLINE]Related articles

Serial analysis of rRNA genes and the unexpected dominance of rare members of microbial communities.

Ashby MN, Rine J, Mongodin EF, Nelson KE, Dimster-Denk D.

Appl Environ Microbiol. 2007 Jul;73(14):4532-42. Epub 2007 May 25.PMID: 17526780 [PubMed - indexed for MEDLINE]Related articlesFree article

HIV-1 genetic diversity and compartmentalization in mother/infant pairs infected with CRF01_AE.

Tovanabutra S, de Souza M, Sittisombut N, Sriplienchan S, Ketsararat V, Birx DL, Khamboonrueng C, Nelson KE, McCutchan FE, Robb ML.

AIDS. 2007 May 11;21(8):1050-3.PMID: 17457103 [PubMed - indexed for MEDLINE]Related articles

Concentration gradient immunoassay. 2. Computational modeling for analysis and optimization.

Foley JO, Nelson KE, Mashadi-Hossein A, Finlayson BA, Yager P.

Anal Chem. 2007 May 15;79(10):3549-53. Epub 2007 Apr 17.PMID: 17437333 [PubMed - indexed for MEDLINE]Related articlesFree article

Concentration gradient immunoassay. 1. An immunoassay based on interdiffusion and surface binding in a microchannel.

Nelson KE, Foley JO, Yager P.

Anal Chem. 2007 May 15;79(10):3542-8. Epub 2007 Apr 17.PMID: 17437332 [PubMed - indexed for MEDLINE]Related articlesFree article

Microbial environmental genomics.

Nelson KE, Methé BA, Kowalchuk GA.

Microb Ecol. 2007 Apr;53(3):367-8. No abstract available. PMID: 17415611 [PubMed - indexed for MEDLINE]Related articles

Complete genomes for hepatitis C virus subtypes 6f, 6i, 6j and 6m: viral genetic diversity among Thai blood donors and infected spouses.

Lu L, Li C, Fu Y, Thaikruea L, Thongswat S, Maneekarn N, Apichartpiyakul C, Hotta H, Okamoto H, Netski D, Pybus OG, Murphy D, Hagedorn CH, Nelson KE.

J Gen Virol. 2007 May;88(Pt 5):1505-18.PMID: 17412980 [PubMed - indexed for MEDLINE]Related articlesFree article

Diagnosis and treatment of latent tuberculosis.

Nelson KE, Hiransuthikul N, Hiransuthikul P.

Int J Tuberc Lung Dis. 2007 Mar;11(3):353. No abstract available. PMID: 17352105 [PubMed - indexed for MEDLINE]Related articles