PubMed

Simplified yet highly accurate enzyme kinetics for cases of low substrate concentrations.

Härdin HM, Zagaris A, Krab K, Westerhoff HV.

FEBS J. 2009 Oct;276(19):5491-506. Epub 2009 Aug 28.PMID: 19725885 [PubMed - indexed for MEDLINE]Related articles

Modular kinetic analysis reveals differences in Cd2+ and Cu2+ ion-induced impairment of oxidative phosphorylation in liver.

Ciapaite J, Nauciene Z, Baniene R, Wagner MJ, Krab K, Mildaziene V.

FEBS J. 2009 Jul;276(13):3656-68. Epub 2009 Jun 1.PMID: 19496816 [PubMed - indexed for MEDLINE]Related articles

Selectivity of TMC207 towards mycobacterial ATP synthase compared with that towards the eukaryotic homologue.

Haagsma AC, Abdillahi-Ibrahim R, Wagner MJ, Krab K, Vergauwen K, Guillemont J, Andries K, Lill H, Koul A, Bald D.

Antimicrob Agents Chemother. 2009 Mar;53(3):1290-2. Epub 2008 Dec 15.PMID: 19075053 [PubMed - indexed for MEDLINE]Related articlesFree article

Microarray analysis reveals a mechanism of phenolic polybrominated diphenylether toxicity in zebrafish.

van Boxtel AL, Kamstra JH, Cenijn PH, Pieterse B, Wagner JM, Antink M, Krab K, van der Burg B, Marsh G, Brouwer A, Legler J.

Environ Sci Technol. 2008 Mar 1;42(5):1773-9.PMID: 18441834 [PubMed - indexed for MEDLINE]Related articles

Regulation of thermogenesis in flowering Araceae: the role of the alternative oxidase.

Wagner AM, Krab K, Wagner MJ, Moore AL.

Biochim Biophys Acta. 2008 Jul-Aug;1777(7-8):993-1000. Epub 2008 Apr 9.PMID: 18440298 [PubMed - indexed for MEDLINE]Related articles

Systems biology towards life in silico: mathematics of the control of living cells.

Westerhoff HV, Kolodkin A, Conradie R, Wilkinson SJ, Bruggeman FJ, Krab K, van Schuppen JH, Hardin H, Bakker BM, Moné MJ, Rybakova KN, Eijken M, van Leeuwen HJ, Snoep JL.

J Math Biol. 2009 Jan;58(1-2):7-34. Epub 2008 Feb 16.PMID: 18278498 [PubMed - indexed for MEDLINE]Related articles

Sequence harmony: detecting functional specificity from alignments.

Feenstra KA, Pirovano W, Krab K, Heringa J.

Nucleic Acids Res. 2007 Jul;35(Web Server issue):W495-8. Epub 2007 Jun 21.PMID: 17584793 [PubMed - indexed for MEDLINE]Related articlesFree article

Palmitate and oleate have distinct effects on the inflammatory phenotype of human endothelial cells.

Ciapaite J, van Bezu J, van Eikenhorst G, Bakker SJ, Teerlink T, Diamant M, Heine RJ, Krab K, Westerhoff HV, Schalkwijk CG.

Biochim Biophys Acta. 2007 Feb;1771(2):147-54. Epub 2006 Dec 20.PMID: 17240190 [PubMed - indexed for MEDLINE]Related articles

Functioning of oxidative phosphorylation in liver mitochondria of high-fat diet fed rats.

Ciapaite J, Bakker SJ, Van Eikenhorst G, Wagner MJ, Teerlink T, Schalkwijk CG, Fodor M, Ouwens DM, Diamant M, Heine RJ, Westerhoff HV, Krab K.

Biochim Biophys Acta. 2007 Mar;1772(3):307-16. Epub 2006 Nov 10.PMID: 17184976 [PubMed - indexed for MEDLINE]Related articles

Metabolic control of mitochondrial properties by adenine nucleotide translocator determines palmitoyl-CoA effects. Implications for a mechanism linking obesity and type 2 diabetes.

Ciapaite J, Bakker SJ, Diamant M, van Eikenhorst G, Heine RJ, Westerhoff HV, Krab K.

FEBS J. 2006 Dec;273(23):5288-302. Epub 2006 Oct 24.PMID: 17059463 [PubMed - indexed for MEDLINE]Related articles

The free NADH concentration is kept constant in plant mitochondria under different metabolic conditions.

Kasimova MR, Grigiene J, Krab K, Hagedorn PH, Flyvbjerg H, Andersen PE, Møller IM.

Plant Cell. 2006 Mar;18(3):688-98. Epub 2006 Feb 3.PMID: 16461578 [PubMed - indexed for MEDLINE]Related articlesFree article

Modular kinetic analysis of the adenine nucleotide translocator-mediated effects of palmitoyl-CoA on the oxidative phosphorylation in isolated rat liver mitochondria.

Ciapaite J, Van Eikenhorst G, Bakker SJ, Diamant M, Heine RJ, Wagner MJ, Westerhoff HV, Krab K.

Diabetes. 2005 Apr;54(4):944-51.PMID: 15793231 [PubMed - indexed for MEDLINE]Related articlesFree article

The alternative respiratory pathway of euglena mitochondria.

Castro-Guerrero NA, Krab K, Moreno-Sánchez R.

J Bioenerg Biomembr. 2004 Oct;36(5):459-69.PMID: 15534393 [PubMed - indexed for MEDLINE]Related articles

Coordinated behavior of mitochondria in both space and time: a reactive oxygen species-activated wave of mitochondrial depolarization.

Brady NR, Elmore SP, van Beek JJ, Krab K, Courtoy PJ, Hue L, Westerhoff HV.

Biophys J. 2004 Sep;87(3):2022-34.PMID: 15345578 [PubMed - indexed for MEDLINE]Related articlesFree article

The mitochondrial outer membrane is not a major diffusion barrier for ADP in mouse heart skinned fibre bundles.

Kongas O, Wagner MJ, ter Veld F, Nicolay K, van Beek JH, Krab K.

Pflugers Arch. 2004 Mar;447(6):840-4. Epub 2004 Jan 14.PMID: 14722773 [PubMed - indexed for MEDLINE]Related articles

Analysis of effects of 2,2',5,5'-tetrachlorobiphenyl on the flux control in oxidative phosphorylation system in rat liver mitochondria.

Mildaziene V, Nauciene Z, Baniene R, Demin O, Krab K.

Mol Biol Rep. 2002;29(1-2):35-40.PMID: 12241071 [PubMed - indexed for MEDLINE]Related articles

The targets of 2,2',5,5'-tetrachlorobiphenyl in the respiratory chain of rat liver mitochondria revealed by modular kinetic analysis.

Mildaziene V, Nauciene Z, Krab K.

Mol Biol Rep. 2002;29(1-2):31-4.PMID: 12241070 [PubMed - indexed for MEDLINE]Related articles

Application of modular control analysis to inhibition of the adenine nucleotide translocator by palmitoyl-CoA.

Ciapaite J, van Eikenhorst G, Krab K.

Mol Biol Rep. 2002;29(1-2):13-6.PMID: 12241043 [PubMed - indexed for MEDLINE]Related articles

A turbo engine with automatic transmission? How to marry chemicomotion to the subtleties and robustness of life.

Koefoed S, Otten M, Koebmann B, Bruggeman F, Bakker B, Snoep J, Krab K, van Spanning R, van Verseveld H, Jensen P, Koster J, Westerhoff H.

Biochim Biophys Acta. 2002 Sep 10;1555(1-3):75-82.PMID: 12206895 [PubMed - indexed for MEDLINE]Related articles

High K(m) of oxidative phosphorylation for ADP in skinned muscle fibers: where does it stem from?

Kongas O, Yuen TL, Wagner MJ, Van Beek JH, Krab K.

Am J Physiol Cell Physiol. 2002 Sep;283(3):C743-51.PMID: 12176731 [PubMed - indexed for MEDLINE]Related articlesFree article

New insights into the regulation of plant succinate dehydrogenase. On the role of the protonmotive force.

Affourtit C, Krab K, Leach GR, Whitehouse DG, Moore AL.

J Biol Chem. 2001 Aug 31;276(35):32567-74. Epub 2001 May 11.PMID: 11350973 [PubMed - indexed for MEDLINE]Related articlesFree article

Control of plant mitochondrial respiration.

Affourtit C, Krab K, Moore AL.

Biochim Biophys Acta. 2001 Mar 1;1504(1):58-69. Review.PMID: 11239485 [PubMed - indexed for MEDLINE]Related articles

Identification of the site where the electron transfer chain of plant mitochondria is stimulated by electrostatic charge screening.

Krab K, Wagner MJ, Wagner AM, Moller IM.

Eur J Biochem. 2000 Feb;267(3):869-76.PMID: 10651825 [PubMed - indexed for MEDLINE]Related articlesFree article

The reduction state of the Q-pool regulates the electron flux through the branched respiratory network of Paracoccus denitrificans.

Otten MF, Reijnders WN, Bedaux JJ, Westerhoff HV, Krab K, Van Spanning RJ.

Eur J Biochem. 1999 May;261(3):767-74.PMID: 10215894 [PubMed - indexed for MEDLINE]Related articlesFree article

Functional expression of the plant alternative oxidase affects growth of the yeast Schizosaccharomyces pombe.

Affourtit C, Albury MS, Krab K, Moore AL.

J Biol Chem. 1999 Mar 5;274(10):6212-8.PMID: 10037707 [PubMed - indexed for MEDLINE]Related articlesFree article

Kinetic interaction between oxidases and dehydrogenases in plant mitochondria.

Affourtit C, Leach GR, Krab K, Moore AL.

Biochem Soc Trans. 1997 Feb;25(1):60S. No abstract available. PMID: 9056958 [PubMed - indexed for MEDLINE]Related articles

The effect of sulfite on the ATP hydrolysis and synthesis activities in chloroplasts and cyanobacterial membrane vesicles can be explained by competition with phosphate.

Bakels RH, Van Wielink JE, Krab K, Van Walraven HS.

Arch Biochem Biophys. 1996 Aug 1;332(1):170-4.PMID: 8806722 [PubMed - indexed for MEDLINE]Related articles

Monovalent cations differentially affect membrane surface properties and membrane curvature, as revealed by fluorescent probes and dynamic light scattering.

Kraayenhof R, Sterk GJ, Wong Fong Sang HW, Krab K, Epand RM.

Biochim Biophys Acta. 1996 Jul 25;1282(2):293-302.PMID: 8703985 [PubMed - indexed for MEDLINE]Related articles

Kinetic analysis of the mitochondrial quinol-oxidizing enzymes during development of thermogenesis in Arum maculatum L.

Leach GR, Krab K, Whitehouse DG, Moore AL.

Biochem J. 1996 Jul 1;317 ( Pt 1):313-9.PMID: 8694781 [PubMed - indexed for MEDLINE]Related articlesFree article

Structural and functional analysis of aa3-type and cbb3-type cytochrome c oxidases of Paracoccus denitrificans reveals significant differences in proton-pump design.

de Gier JW, Schepper M, Reijnders WN, van Dyck SJ, Slotboom DJ, Warne A, Saraste M, Krab K, Finel M, Stouthamer AH, van Spanning RJ, van der Oost J.

Mol Microbiol. 1996 Jun;20(6):1247-60.PMID: 8809776 [PubMed - indexed for MEDLINE]Related articles

The Cyanide-Resistant Oxidase: To Inhibit or Not to Inhibit, That Is the Question.

Day DA, Krab K, Lambers H, Moore AL, Siedow JN, Wagner AM, Wiskich JT.

Plant Physiol. 1996 Jan;110(1):1-2. No abstract available. PMID: 12226168 [PubMed - as supplied by publisher]Related articlesFree article

Kinetic and regulatory aspects of the function of the alternative oxidase in plant respiration.

Krab K.

J Bioenerg Biomembr. 1995 Aug;27(4):387-96. Review.PMID: 8595974 [PubMed - indexed for MEDLINE]Related articles

A mathematical model to describe quinone pool kinetics and analyse control of respiration in plant mitochondria.

Krab K, van den Bergen CW, Moore AL.

Biochem Soc Trans. 1995 May;23(2):289S. No abstract available. PMID: 7672315 [PubMed - indexed for MEDLINE]Related articles

The relationship between electron flux and the redox poise of the quinone pool in plant mitochondria. Interplay between quinol-oxidizing and quinone-reducing pathways.

Van den Bergen CW, Wagner AM, Krab K, Moore AL.

Eur J Biochem. 1994 Dec 15;226(3):1071-8.PMID: 7813462 [PubMed - indexed for MEDLINE]Related articlesFree article

Titration of the external NADH dehydrogenase and the alternative oxidase in plant mitochondria.

Leach GR, Krab K, Moore AL.

Biochem Soc Trans. 1994 Nov;22(4):406S. No abstract available. PMID: 7698428 [PubMed - indexed for MEDLINE]Related articles

The effect of sulfite on the ATP hydrolysis and synthesis activity of membrane-bound H(+)-ATP synthase from various species.

Bakels RH, Van Walraven HS, Van Wielink JE, Van Der Zwet-De Graaff I, Krenn BE, Krab K, Berden JA, Kraayenhof R.

Biochem Biophys Res Commun. 1994 Jun 15;201(2):487-92.PMID: 8002977 [PubMed - indexed for MEDLINE]Related articles

On the activation mechanism of the H(+)-ATP synthase and unusual thermodynamic properties in the alkalophilic cyanobacterium Spirulina platensis.

Bakels RH, van Walraven HS, Krab K, Scholts MJ, Kraayenhof R.

Eur J Biochem. 1993 May 1;213(3):957-64.PMID: 8504834 [PubMed - indexed for MEDLINE]Related articlesFree article

Modulation of the Access of Exogenous NAD(P)H to the Alternative Pathway in Potato Tuber Callus Mitochondria with Triton X-100.

Wagner AM, van den Bergen CW, Krab K.

Plant Physiol. 1992 Nov;100(3):1259-1262.PMID: 16653114 [PubMed - as supplied by publisher]Related articlesFree article

Principles of coupling between electron transfer and proton translocation with special reference to proton-translocation mechanisms in cytochrome oxidase.

Krab K, Wikström M.

Biochim Biophys Acta. 1987;895(1):25-39. Review.PMID: 2449910 [PubMed - indexed for MEDLINE]Related articles

Determination of the stoichiometry of redox-linked proton translocation from the kinetics of pulse experiments. A simulation study.

Krab K, Wikström M.

FEBS Lett. 1986 Jun 9;201(2):198-204.PMID: 3011510 [PubMed - indexed for MEDLINE]Related articles

The semiquinone cycle. A hypothesis of electron transfer and proton translocation in cytochrome bc-type complexes.

Wikström M, Krab K.

J Bioenerg Biomembr. 1986 Jun;18(3):181-93. Review.PMID: 3015895 [PubMed - indexed for MEDLINE]Related articles

The use of carotenoids and oxonol VI as probes for membrane potential in proteoliposomes.

van Walraven HS, Krab K, Hagendoorn MJ, Kraayenhof R.

FEBS Lett. 1985 May 6;184(1):96-9.PMID: 3157600 [PubMed - indexed for MEDLINE]Related articles

The H+/O ratio of proton translocation linked to the oxidation of succinate by mitochondria.

Krab K, Soos J, Wikström M.

FEBS Lett. 1984 Dec 10;178(2):187-92.PMID: 6096164 [PubMed - indexed for MEDLINE]Related articles

Proton pump coupled to cytochrome c oxidase in Paracoccus denitrificans.

van Verseveld HW, Krab K, Stouthamer AH.

Biochim Biophys Acta. 1981 May 13;635(3):525-34.PMID: 6263335 [PubMed - indexed for MEDLINE]Related articles

Proton-translocating cytochrome complexes.

Wikström M, Krab K, Saraste M.

Annu Rev Biochem. 1981;50:623-55. Review. No abstract available. PMID: 6267990 [PubMed - indexed for MEDLINE]Related articles

Relationship between chemiosomotic flows and thermodynamic forces in oxidative phosphorylation.

Van Dam K, Westerhoff HV, Krab K, van der Meer R, Arents JC.

Biochim Biophys Acta. 1980 Jul 8;591(2):240-50.PMID: 7397123 [PubMed - indexed for MEDLINE]Related articles

Effect of 2-n-heptyl-4-hydroxyquinoline N-oxide on proton permeability of the mitochondrial membrane.

Krab K, Wikström M.

Biochem J. 1980 Feb 15;186(2):637-9.PMID: 6246892 [PubMed - indexed for MEDLINE]Related articlesFree article

On the stoichiometry and thermodynamics of proton-pumping cytochrome c oxidase in mitochondria.

Krab K, Wikström M.

Biochim Biophys Acta. 1979 Oct 10;548(1):1-15.PMID: 39598 [PubMed - indexed for MEDLINE]Related articles

Mechanism and stoicheiometry of redox-linked proton translocation in mitochondria.

Wikström M, Krab K.

Biochem Soc Trans. 1979 Oct;7(5):880-7. No abstract available. PMID: 41782 [PubMed - indexed for MEDLINE]Related articles

Proton-pumping cytochrome c oxidase.

Wikström M, Krab K.

Biochim Biophys Acta. 1979 Aug 17;549(2):177-22. Review. No abstract available. PMID: 38840 [PubMed - indexed for MEDLINE]Related articles