PubMed

Pluripotency genes overexpressed in primate embryonic stem cells are localized on homologues of human chromosomes 16, 17, 19, and X.

Ben-Yehudah A, Navara CS, Redinger CJ, Mich-Basso JD, Castro CA, Oliver S, Chensny LJ, Richards TJ, Kaminski N, Schatten G.

Stem Cell Res. 2009 Sep 17. [Epub ahead of print]PMID: 19854689 [PubMed - as supplied by publisher]Related articles

Establishment of an immunoglobulin m antibody-forming cell response model for characterizing immunotoxicity in primary human B cells.

Lu H, Crawford RB, North CM, Kaplan BL, Kaminski NE.

Toxicol Sci. 2009 Dec;112(2):363-73. Epub 2009 Sep 18.PMID: 19767444 [PubMed - in process]Related articles

The influence of radiographic phenotype and smoking status on peripheral blood biomarker patterns in chronic obstructive pulmonary disease.

Bon JM, Leader JK, Weissfeld JL, Coxson HO, Zheng B, Branch RA, Kondragunta V, Lee JS, Zhang Y, Choi AM, Lokshin AE, Kaminski N, Gur D, Sciurba FC.

PLoS One. 2009 Aug 31;4(8):e6865.PMID: 19718453 [PubMed - in process]Related articlesFree article

Simultaneous in vivo time course and dose response evaluation for TCDD-induced impairment of the LPS-stimulated primary IgM response.

North CM, Crawford RB, Lu H, Kaminski NE.

Toxicol Sci. 2009 Nov;112(1):123-32. Epub 2009 Aug 12.PMID: 19675145 [PubMed - in process]Related articles

Increased local expression of coagulation factor X contributes to the fibrotic response in human and murine lung injury.

Scotton CJ, Krupiczojc MA, Königshoff M, Mercer PF, Lee YC, Kaminski N, Morser J, Post JM, Maher TM, Nicholson AG, Moffatt JD, Laurent GJ, Derian CK, Eickelberg O, Chambers RC.

J Clin Invest. 2009 Sep;119(9):2550-63. doi: 10.1172/JCI33288. Epub 2009 Aug 3.PMID: 19652365 [PubMed - indexed for MEDLINE]Related articlesFree article

Characterization and peripheral blood biomarker assessment of anti-Jo-1 antibody-positive interstitial lung disease.

Richards TJ, Eggebeen A, Gibson K, Yousem S, Fuhrman C, Gochuico BR, Fertig N, Oddis CV, Kaminski N, Rosas IO, Ascherman DP.

Arthritis Rheum. 2009 Jul;60(7):2183-92.PMID: 19565490 [PubMed - indexed for MEDLINE]Related articlesFree article

FACS-assisted microarray profiling implicates novel genes and pathways in zebrafish gastrointestinal tract development.

Stuckenholz C, Lu L, Thakur P, Kaminski N, Bahary N.

Gastroenterology. 2009 Oct;137(4):1321-32. Epub 2009 Jun 27.PMID: 19563808 [PubMed - indexed for MEDLINE]Related articles

Systemic inhibition of NF-kappaB activation protects from silicosis.

Di Giuseppe M, Gambelli F, Hoyle GW, Lungarella G, Studer SM, Richards T, Yousem S, McCurry K, Dauber J, Kaminski N, Leikauf G, Ortiz LA.

PLoS One. 2009 May 25;4(5):e5689.PMID: 19479048 [PubMed - indexed for MEDLINE]Related articlesFree article

Clara Cells Attenuate the Inflammatory Response through Regulation of Macrophage Behavior.

Snyder JC, Reynolds SD, Hollingsworth JW, Li Z, Kaminski N, Stripp BR.

Am J Respir Cell Mol Biol. 2009 May 7. [Epub ahead of print]PMID: 19423773 [PubMed - as supplied by publisher]Related articles

Features of mammalian microRNA promoters emerge from polymerase II chromatin immunoprecipitation data.

Corcoran DL, Pandit KV, Gordon B, Bhattacharjee A, Kaminski N, Benos PV.

PLoS One. 2009;4(4):e5279. Epub 2009 Apr 23.PMID: 19390574 [PubMed - indexed for MEDLINE]Related articlesFree article

Gene expression profiles of acute exacerbations of idiopathic pulmonary fibrosis.

Konishi K, Gibson KF, Lindell KO, Richards TJ, Zhang Y, Dhir R, Bisceglia M, Gilbert S, Yousem SA, Song JW, Kim DS, Kaminski N.

Am J Respir Crit Care Med. 2009 Jul 15;180(2):167-75. Epub 2009 Apr 10. Erratum in: Am J Respir Crit Care Med. 2009 Aug 15;180(4):380. PMID: 19363140 [PubMed - indexed for MEDLINE]Related articles

WNT5A is a regulator of fibroblast proliferation and resistance to apoptosis.

Vuga LJ, Ben-Yehudah A, Kovkarova-Naumovski E, Oriss T, Gibson KF, Feghali-Bostwick C, Kaminski N.

Am J Respir Cell Mol Biol. 2009 Nov;41(5):583-9. Epub 2009 Feb 27.PMID: 19251946 [PubMed - in process]Related articles

Involvement of Blimp-1 and AP-1 dysregulation in the 2,3,7,8-Tetrachlorodibenzo-p-dioxin-mediated suppression of the IgM response by B cells.

Schneider D, Manzan MA, Yoo BS, Crawford RB, Kaminski N.

Toxicol Sci. 2009 Apr;108(2):377-88. Epub 2009 Feb 23.PMID: 19237549 [PubMed - indexed for MEDLINE]Related articles

Carbon monoxide modulates alpha-smooth muscle actin and small proline rich-1a expression in fibrosis.

Zheng L, Zhou Z, Lin L, Alber S, Watkins S, Kaminski N, Choi AM, Morse D.

Am J Respir Cell Mol Biol. 2009 Jul;41(1):85-92. Epub 2008 Dec 18.PMID: 19097987 [PubMed - indexed for MEDLINE]Related articles

Oxidative stress alters syndecan-1 distribution in lungs with pulmonary fibrosis.

Kliment CR, Englert JM, Gochuico BR, Yu G, Kaminski N, Rosas I, Oury TD.

J Biol Chem. 2009 Feb 6;284(6):3537-45. Epub 2008 Dec 9.PMID: 19073610 [PubMed - indexed for MEDLINE]Related articles

Health and Environmental Sciences Institute, International Life Sciences Institute (ILSI) sponsored workshop on the application of human sera for novel protein allergenicity evaluations.

Kaminski NE.

Food Chem Toxicol. 2008 Oct;46 Suppl 10:S1. No abstract available. PMID: 18929186 [PubMed - indexed for MEDLINE]Related articles

Suppression of T cell costimulator ICOS by Delta9-tetrahydrocannabinol.

Lu H, Kaplan BL, Ngaotepprutaram T, Kaminski NE.

J Leukoc Biol. 2009 Feb;85(2):322-9. Epub 2008 Nov 6.PMID: 18988696 [PubMed - indexed for MEDLINE]Related articles

TCDD-mediated suppression of the in vitro anti-sheep erythrocyte IgM antibody forming cell response is reversed by interferon-gamma.

North CM, Kim BS, Snyder N, Crawford RB, Holsapple MP, Kaminski NE.

Toxicol Sci. 2009 Jan;107(1):85-92. Epub 2008 Oct 22.PMID: 18948302 [PubMed - indexed for MEDLINE]Related articles

Diaphragmatic paralysis: a clinical imitator of cardiorespiratory diseases.

Ben-Dov I, Kaminski N, Reichert N, Rosenman J, Shulimzon T.

Isr Med Assoc J. 2008 Aug-Sep;10(8-9):579-83.PMID: 18847154 [PubMed - indexed for MEDLINE]Related articlesFree article

Network analysis of temporal effects of intermittent and sustained hypoxia on rat lungs.

Wu W, Dave NB, Yu G, Strollo PJ, Kovkarova-Naumovski E, Ryter SW, Reeves SR, Dayyat E, Wang Y, Choi AM, Gozal D, Kaminski N.

Physiol Genomics. 2008 Dec 12;36(1):24-34. Epub 2008 Sep 30.PMID: 18826996 [PubMed - indexed for MEDLINE]Related articles

Effects of targeted deletion of cannabinoid receptors CB1 and CB2 on immune competence and sensitivity to immune modulation by Delta9-tetrahydrocannabinol.

Springs AE, Karmaus PW, Crawford RB, Kaplan BL, Kaminski NE.

J Leukoc Biol. 2008 Dec;84(6):1574-84. Epub 2008 Sep 12.PMID: 18791168 [PubMed - indexed for MEDLINE]Related articles

Molecular staging of epithelial maturation using secretory cell-specific genes as markers.

Zemke AC, Snyder JC, Brockway BL, Drake JA, Reynolds SD, Kaminski N, Stripp BR.

Am J Respir Cell Mol Biol. 2009 Mar;40(3):340-8. Epub 2008 Aug 28.PMID: 18757308 [PubMed - indexed for MEDLINE]Related articles

In memory of Billy R. Martin (1943-2008).

Klein TW, Peterson P, Cabral G, Kaminski N, Adler M.

J Neuroimmune Pharmacol. 2008 Dec;3(4):201-2. Epub 2008 Aug 22. No abstract available. PMID: 18720014 [PubMed - indexed for MEDLINE]Related articles

The profile of immune modulation by cannabidiol (CBD) involves deregulation of nuclear factor of activated T cells (NFAT).

Kaplan BL, Springs AE, Kaminski NE.

Biochem Pharmacol. 2008 Sep 15;76(6):726-37. Epub 2008 Jul 8.PMID: 18656454 [PubMed - indexed for MEDLINE]Related articlesFree article

Alignment and classification of time series gene expression in clinical studies.

Lin TH, Kaminski N, Bar-Joseph Z.

Bioinformatics. 2008 Jul 1;24(13):i147-55.PMID: 18586707 [PubMed - indexed for MEDLINE]Related articlesFree article

Cross talk between Id1 and its interactive protein Dril1 mediate fibroblast responses to transforming growth factor-beta in pulmonary fibrosis.

Lin L, Zhou Z, Zheng L, Alber S, Watkins S, Ray P, Kaminski N, Zhang Y, Morse D.

Am J Pathol. 2008 Aug;173(2):337-46. Epub 2008 Jun 26.PMID: 18583319 [PubMed - indexed for MEDLINE]Related articlesFree article

A COX-2 metabolite of the endogenous cannabinoid, 2-arachidonyl glycerol, mediates suppression of IL-2 secretion in activated Jurkat T cells.

Rockwell CE, Raman P, Kaplan BL, Kaminski NE.

Biochem Pharmacol. 2008 Aug 1;76(3):353-61. Epub 2008 May 9.PMID: 18571623 [PubMed - indexed for MEDLINE]Related articles

Malignancy in lung transplantation: biomarkers, gender differences, and consideration of a systems biology approach.

Studer SM, Taioli E, Crespo M, Kaminski N.

Transplantation. 2008 Apr 27;85(8 Suppl):S69-71.PMID: 18425041 [PubMed - indexed for MEDLINE]Related articles

2,3,7,8-Tetrachlorodibenzo-p-dioxin-mediated impairment of B cell differentiation involves dysregulation of paired box 5 (Pax5) isoform, Pax5a.

Schneider D, Manzan MA, Crawford RB, Chen W, Kaminski NE.

J Pharmacol Exp Ther. 2008 Aug;326(2):463-74. Epub 2008 May 15.PMID: 18483191 [PubMed - indexed for MEDLINE]Related articlesFree article

MMP1 and MMP7 as potential peripheral blood biomarkers in idiopathic pulmonary fibrosis.

Rosas IO, Richards TJ, Konishi K, Zhang Y, Gibson K, Lokshin AE, Lindell KO, Cisneros J, Macdonald SD, Pardo A, Sciurba F, Dauber J, Selman M, Gochuico BR, Kaminski N.

PLoS Med. 2008 Apr 29;5(4):e93.PMID: 18447576 [PubMed - indexed for MEDLINE]Related articlesFree article

Idiopathic pulmonary fibrosis: aberrant recapitulation of developmental programs?

Selman M, Pardo A, Kaminski N.

PLoS Med. 2008 Mar 4;5(3):e62. No abstract available. PMID: 18318599 [PubMed - indexed for MEDLINE]Related articlesFree article

Mitogen-activated protein kinases regulate susceptibility to ventilator-induced lung injury.

Dolinay T, Wu W, Kaminski N, Ifedigbo E, Kaynar AM, Szilasi M, Watkins SC, Ryter SW, Hoetzel A, Choi AM.

PLoS One. 2008 Feb 13;3(2):e1601.PMID: 18270588 [PubMed - indexed for MEDLINE]Related articlesFree article

A role for the receptor for advanced glycation end products in idiopathic pulmonary fibrosis.

Englert JM, Hanford LE, Kaminski N, Tobolewski JM, Tan RJ, Fattman CL, Ramsgaard L, Richards TJ, Loutaev I, Nawroth PP, Kasper M, Bierhaus A, Oury TD.

Am J Pathol. 2008 Mar;172(3):583-91. Epub 2008 Feb 2.PMID: 18245812 [PubMed - indexed for MEDLINE]Related articlesFree article

Transgelin is a direct target of TGF-beta/Smad3-dependent epithelial cell migration in lung fibrosis.

Yu H, Königshoff M, Jayachandran A, Handley D, Seeger W, Kaminski N, Eickelberg O.

FASEB J. 2008 Jun;22(6):1778-89. Epub 2008 Feb 1.PMID: 18245174 [PubMed - indexed for MEDLINE]Related articlesFree article

Approaching the degradome in idiopathic pulmonary fibrosis.

Pardo A, Selman M, Kaminski N.

Int J Biochem Cell Biol. 2008;40(6-7):1141-55. Epub 2007 Dec 8. Review.PMID: 18207447 [PubMed - indexed for MEDLINE]Related articles

Targeted deletion of cannabinoid receptors CB1 and CB2 produced enhanced inflammatory responses to influenza A/PR/8/34 in the absence and presence of Delta9-tetrahydrocannabinol.

Buchweitz JP, Karmaus PW, Williams KJ, Harkema JR, Kaminski NE.

J Leukoc Biol. 2008 Mar;83(3):785-96. Epub 2007 Dec 11.PMID: 18073275 [PubMed - indexed for MEDLINE]Related articlesFree article

A functional and regulatory map of asthma.

Novershtern N, Itzhaki Z, Manor O, Friedman N, Kaminski N.

Am J Respir Cell Mol Biol. 2008 Mar;38(3):324-36. Epub 2007 Oct 5.PMID: 17921359 [PubMed - indexed for MEDLINE]Related articlesFree article

Modulation of airway responses to influenza A/PR/8/34 by Delta9-tetrahydrocannabinol in C57BL/6 mice.

Buchweitz JP, Karmaus PW, Harkema JR, Williams KJ, Kaminski NE.

J Pharmacol Exp Ther. 2007 Nov;323(2):675-83. Epub 2007 Aug 28.PMID: 17726158 [PubMed - indexed for MEDLINE]Related articlesFree article

Cellular and humoral autoreactivity in idiopathic pulmonary fibrosis.

Feghali-Bostwick CA, Tsai CG, Valentine VG, Kantrow S, Stoner MW, Pilewski JM, Gadgil A, George MP, Gibson KF, Choi AM, Kaminski N, Zhang Y, Duncan SR.

J Immunol. 2007 Aug 15;179(4):2592-9.PMID: 17675522 [PubMed - indexed for MEDLINE]Related articlesFree article

Pedigreed primate embryonic stem cells express homogeneous familial gene profiles.

Navara CS, Mich-Basso JD, Redinger CJ, Ben-Yehudah A, Jacoby E, Kovkarova-Naumovski E, Sukhwani M, Orwig K, Kaminski N, Castro CA, Simerly CR, Schatten G.

Stem Cells. 2007 Nov;25(11):2695-704. Epub 2007 Jul 19.PMID: 17641389 [PubMed - indexed for MEDLINE]Related articlesFree article

Acute exacerbations of idiopathic pulmonary fibrosis.

Collard HR, Moore BB, Flaherty KR, Brown KK, Kaner RJ, King TE Jr, Lasky JA, Loyd JE, Noth I, Olman MA, Raghu G, Roman J, Ryu JH, Zisman DA, Hunninghake GW, Colby TV, Egan JJ, Hansell DM, Johkoh T, Kaminski N, Kim DS, Kondoh Y, Lynch DA, Müller-Quernheim J, Myers JL, Nicholson AG, Selman M, Toews GB, Wells AU, Martinez FJ; Idiopathic Pulmonary Fibrosis Clinical Research Network Investigators.

Am J Respir Crit Care Med. 2007 Oct 1;176(7):636-43. Epub 2007 Jun 21. Review.PMID: 17585107 [PubMed - indexed for MEDLINE]Related articlesFree article

A patient-gene model for temporal expression profiles in clinical studies.

Kaminski N, Bar-Joseph Z.

J Comput Biol. 2007 Apr;14(3):324-38.PMID: 17563314 [PubMed - indexed for MEDLINE]Related articles

Accelerated variant of idiopathic pulmonary fibrosis: clinical behavior and gene expression pattern.

Selman M, Carrillo G, Estrada A, Mejia M, Becerril C, Cisneros J, Gaxiola M, Pérez-Padilla R, Navarro C, Richards T, Dauber J, King TE Jr, Pardo A, Kaminski N.

PLoS One. 2007 May 30;2(5):e482.PMID: 17534432 [PubMed]Related articlesFree article

Time-dependent airway epithelial and inflammatory cell responses induced by influenza virus A/PR/8/34 in C57BL/6 mice.

Buchweitz JP, Harkema JR, Kaminski NE.

Toxicol Pathol. 2007;35(3):424-35.PMID: 17487773 [PubMed - indexed for MEDLINE]Related articles

Effects of exercise training on quadriceps muscle gene expression in chronic obstructive pulmonary disease.

Radom-Aizik S, Kaminski N, Hayek S, Halkin H, Cooper DM, Ben-Dov I.

J Appl Physiol. 2007 May;102(5):1976-84.PMID: 17483440 [PubMed - indexed for MEDLINE]Related articlesFree article

Genomics and proteomics of lung disease: conference summary.

Raj JU, Aliferis C, Caprioli RM, Cowley AW Jr, Davies PF, Duncan MW, Erle DJ, Erzurum SC, Finn PW, Ischiropoulos H, Kaminski N, Kleeberger SR, Leikauf GD, Loyd JE, Martin TR, Matalon S, Moore JH, Quackenbush J, Sabo-Attwood T, Shapiro SD, Schnitzer JE, Schwartz DA, Schwiebert LM, Sheppard D, Ware LB, Weiss ST, Whitsett JA, Wurfel MM, Matthay MA.

Am J Physiol Lung Cell Mol Physiol. 2007 Jul;293(1):L45-51. Epub 2007 Apr 27. No abstract available. PMID: 17468134 [PubMed - indexed for MEDLINE]Related articlesFree article

Biological stress response terminology: Integrating the concepts of adaptive response and preconditioning stress within a hormetic dose-response framework.

Calabrese EJ, Bachmann KA, Bailer AJ, Bolger PM, Borak J, Cai L, Cedergreen N, Cherian MG, Chiueh CC, Clarkson TW, Cook RR, Diamond DM, Doolittle DJ, Dorato MA, Duke SO, Feinendegen L, Gardner DE, Hart RW, Hastings KL, Hayes AW, Hoffmann GR, Ives JA, Jaworowski Z, Johnson TE, Jonas WB, Kaminski NE, Keller JG, Klaunig JE, Knudsen TB, Kozumbo WJ, Lettieri T, Liu SZ, Maisseu A, Maynard KI, Masoro EJ, McClellan RO, Mehendale HM, Mothersill C, Newlin DB, Nigg HN, Oehme FW, Phalen RF, Philbert MA, Rattan SI, Riviere JE, Rodricks J, Sapolsky RM, Scott BR, Seymour C, Sinclair DA, Smith-Sonneborn J, Snow ET, Spear L, Stevenson DE, Thomas Y, Tubiana M, Williams GM, Mattson MP.

Toxicol Appl Pharmacol. 2007 Jul 1;222(1):122-8. Epub 2007 Mar 7. Review.PMID: 17459441 [PubMed - indexed for MEDLINE]Related articles

Endocannabinoid regulates blood pressure via activation of the transient receptor potential vanilloid type 1 in Wistar rats fed a high-salt diet.

Wang Y, Kaminski NE, Wang DH.

J Pharmacol Exp Ther. 2007 May;321(2):763-9. Epub 2007 Feb 16.PMID: 17308041 [PubMed - indexed for MEDLINE]Related articlesFree article

Chromosomal aberrations and gene expression profiles in non-small cell lung cancer.

Dehan E, Ben-Dor A, Liao W, Lipson D, Frimer H, Rienstein S, Simansky D, Krupsky M, Yaron P, Friedman E, Rechavi G, Perlman M, Aviram-Goldring A, Izraeli S, Bittner M, Yakhini Z, Kaminski N.

Lung Cancer. 2007 May;56(2):175-84. Epub 2007 Jan 25.PMID: 17258348 [PubMed - indexed for MEDLINE]Related articles

Towards systems biology of human pulmonary fibrosis.

Studer SM, Kaminski N.

Proc Am Thorac Soc. 2007 Jan;4(1):85-91. Review.PMID: 17202296 [PubMed - indexed for MEDLINE]Related articlesFree article