PubMed

Agrobacterium tumefaciens-mediated transformation of antifungal lipopeptide producing fungus Coleophoma empetri F-11899.

Yamada M, Yawata K, Orino Y, Ueda S, Isogai Y, Taguchi G, Shimosaka M, Hashimoto S.

Curr Genet. 2009 Oct 30. [Epub ahead of print]PMID: 19876630 [PubMed - as supplied by publisher]Related articles

Effect of pressure on the secondary structure of coiled coil peptide GCN4-p1.

Imamura H, Isogai Y, Takekiyo T, Kato M.

Biochim Biophys Acta. 2009 Oct 13. [Epub ahead of print]PMID: 19833237 [PubMed - as supplied by publisher]Related articles

Design of a novel heme protein with a non-heme globin scaffold.

Isogai Y, Ishida M.

Biochemistry. 2009 Sep 1;48(34):8136-42.PMID: 19601582 [PubMed - indexed for MEDLINE]Related articles

Group III secreted phospholipase A2 transgenic mice spontaneously develop inflammation.

Sato H, Taketomi Y, Isogai Y, Masuda S, Kobayashi T, Yamamoto K, Murakami M.

Biochem J. 2009 Jun 12;421(1):17-27.PMID: 19371233 [PubMed - indexed for MEDLINE]Related articlesFree article

Analyses of group III secreted phospholipase A2 transgenic mice reveal potential participation of this enzyme in plasma lipoprotein modification, macrophage foam cell formation, and atherosclerosis.

Sato H, Kato R, Isogai Y, Saka G, Ohtsuki M, Taketomi Y, Yamamoto K, Tsutsumi K, Yamada J, Masuda S, Ishikawa Y, Ishii T, Kobayashi T, Ikeda K, Taguchi R, Hatakeyama S, Hara S, Kudo I, Itabe H, Murakami M.

J Biol Chem. 2008 Nov 28;283(48):33483-97. Epub 2008 Sep 18.PMID: 18801741 [PubMed - indexed for MEDLINE]Related articles

Distribution of filarial elephantiasis and hydrocele in Matara district, Sri Lanka, as reported by local leaders, and an immunological survey in areas with relatively high clinical rates.

Weerasooriya MV, Isogai Y, Itoh M, Yahathugoda TC, Vidanapathirana KK, Mudalige MP, Kimura E.

Parasitol Int. 2008 Sep;57(3):390-5. Epub 2008 Apr 12.PMID: 18508407 [PubMed - indexed for MEDLINE]Related articles

The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans.

King N, Westbrook MJ, Young SL, Kuo A, Abedin M, Chapman J, Fairclough S, Hellsten U, Isogai Y, Letunic I, Marr M, Pincus D, Putnam N, Rokas A, Wright KJ, Zuzow R, Dirks W, Good M, Goodstein D, Lemons D, Li W, Lyons JB, Morris A, Nichols S, Richter DJ, Salamov A, Sequencing JG, Bork P, Lim WA, Manning G, Miller WT, McGinnis W, Shapiro H, Tjian R, Grigoriev IV, Rokhsar D.

Nature. 2008 Feb 14;451(7180):783-8.PMID: 18273011 [PubMed - indexed for MEDLINE]Related articlesFree article

Transcription of histone gene cluster by differential core-promoter factors.

Isogai Y, Keles S, Prestel M, Hochheimer A, Tjian R.

Genes Dev. 2007 Nov 15;21(22):2936-49. Epub 2007 Oct 31.PMID: 17978101 [PubMed - indexed for MEDLINE]Related articlesFree article

Novel TRF1/BRF target genes revealed by genome-wide analysis of Drosophila Pol III transcription.

Isogai Y, Takada S, Tjian R, Keleş S.

EMBO J. 2007 Jan 10;26(1):79-89. Epub 2006 Dec 14.PMID: 17170711 [PubMed - indexed for MEDLINE]Related articlesFree article

Pressure stability of the alpha-helix structure in a de novo designed protein (alpha-l-alpha)(2) studied by FTIR spectroscopy.

Takekiyo T, Takeda N, Isogai Y, Kato M, Taniguchi Y.

Biopolymers. 2007 Feb 5;85(2):185-8.PMID: 17103420 [PubMed - indexed for MEDLINE]Related articles

Coactivator cross-talk specifies transcriptional output.

Marr MT 2nd, Isogai Y, Wright KJ, Tjian R.

Genes Dev. 2006 Jun 1;20(11):1458-69.PMID: 16751183 [PubMed - indexed for MEDLINE]Related articlesFree article

Large Raman-scattering activities for the low-frequency modes of substituted benzenes: induced polarizability and stereo-specific ring-substituent interactions.

Yamakita Y, Isogai Y, Ohno K.

J Chem Phys. 2006 Mar 14;124(10):104301.PMID: 16542073 [PubMed - indexed for MEDLINE]Related articles

Native protein sequences are designed to destabilize folding intermediates.

Isogai Y.

Biochemistry. 2006 Feb 28;45(8):2488-92.PMID: 16489741 [PubMed - indexed for MEDLINE]Related articles

Frame shuffling: a novel method for in vitro protein evolution.

Kashiwagi K, Isogai Y, Nishiguchi K, Shiba K.

Protein Eng Des Sel. 2006 Mar;19(3):135-40. Epub 2006 Jan 13.PMID: 16415043 [PubMed - indexed for MEDLINE]Related articlesFree article

Chemo-enzymatic synthesis of eel calcitonin glycosylated at two sites with the same and different carbohydrate structures.

Haneda K, Takeuchi M, Tagashira M, Inazu T, Toma K, Isogai Y, Hori M, Kobayashi K, Takeuchi M, Takegawa K, Yamamoto K.

Carbohydr Res. 2006 Feb 6;341(2):181-90. Epub 2005 Dec 15.PMID: 16343462 [PubMed - indexed for MEDLINE]Related articles

Design of lambda Cro fold: solution structure of a monomeric variant of the de novo protein.

Isogai Y, Ito Y, Ikeya T, Shiro Y, Ota M.

J Mol Biol. 2005 Dec 9;354(4):801-14. Epub 2005 Oct 21.PMID: 16289118 [PubMed - indexed for MEDLINE]Related articles

[Human parathyroid hormone (1-34) as a new therapeutic agent for osteoporosis.]

Isogai Y.

Clin Calcium. 2005 Jan;15(1):18-24. Review. Japanese. PMID: 15632468 [PubMed - indexed for MEDLINE]Related articles

Chemo-enzymatic synthesis and structure-activity study of artificially N-glycosylated eel calcitonin derivatives with a complex type oligosaccharide.

Haneda K, Tagashira M, Yoshino E, Takeuchi M, Inazu T, Toma K, Iijima H, Isogai Y, Hori M, Takamatsu S, Fujibayashi Y, Kobayashi K, Takeuchi M, Yamamoto K.

Glycoconj J. 2004;21(6):377-86.PMID: 15514484 [PubMed - indexed for MEDLINE]Related articles

Design and synthesis of de novo cytochromes c.

Ishida M, Dohmae N, Shiro Y, Oku T, Iizuka T, Isogai Y.

Biochemistry. 2004 Aug 3;43(30):9823-33.PMID: 15274636 [PubMed - indexed for MEDLINE]Related articles

Congenital absence of the portal vein complicating hepatic tumors.

Takagaki K, Kodaira M, Kuriyama S, Isogai Y, Nogaki A, Ichikawa N, Kajimura M.

Intern Med. 2004 Mar;43(3):194-8.PMID: 15098599 [PubMed - indexed for MEDLINE]Related articlesFree article

A novel microperoxidase activity: methyl viologen-linked nitrite reducing activity of microperoxidase.

Suruga K, Murakami K, Taniyama Y, Hama T, Chida H, Satoh T, Yamada S, Hakamata W, Kawachi R, Isogai Y, Nishio T, Oku T.

Biochem Biophys Res Commun. 2004 Mar 19;315(4):815-22.PMID: 14985085 [PubMed - indexed for MEDLINE]Related articles

Double gallbladder.

Hishinuma M, Isogai Y, Matsuura Y, Kodaira M, Oi S, Ichikawa N, Kosukegawa M, Kuriki K.

J Gastroenterol Hepatol. 2004 Feb;19(2):233-5. No abstract available. PMID: 14731140 [PubMed - indexed for MEDLINE]Related articles

Role of c-Myc in nitric oxide-mediated suppression of cytochrome P450 3A4.

Watabe M, Isogai Y, Numazawa S, Yoshida T.

Life Sci. 2003 Nov 21;74(1):99-108.PMID: 14575816 [PubMed - indexed for MEDLINE]Related articles

Synthesis of biotinylated heme and its application to panning heme-binding proteins.

Ishida M, Dohmae N, Shiro Y, Isogai Y.

Anal Biochem. 2003 Oct 1;321(1):138-41. No abstract available. PMID: 12963066 [PubMed - indexed for MEDLINE]Related articles

Targeting genes and transcription factors to segregated nuclear compartments.

Isogai Y, Tjian R.

Curr Opin Cell Biol. 2003 Jun;15(3):296-303. Review.PMID: 12787771 [PubMed - indexed for MEDLINE]Related articles

Increasing the conformational stability by replacement of heme axial ligand in c-type cytochrome.

Satoh T, Itoga A, Isogai Y, Kurihara M, Yamada S, Natori M, Suzuki N, Suruga K, Kawachi R, Arahira M, Nishio T, Fukazawa C, Oku T.

FEBS Lett. 2002 Nov 20;531(3):543-7.PMID: 12435608 [PubMed - indexed for MEDLINE]Related articles

Identification of amino acids involved in protein structural uniqueness: implication for de novo protein design.

Isogai Y, Ota M, Ishii A, Ishida M, Nishikawa K.

Protein Eng. 2002 Jul;15(7):555-60.PMID: 12200537 [PubMed - indexed for MEDLINE]Related articlesFree article

Effect of carbohydrate structure on biological activity of artificially N-glycosylated eel calcitonin.

Tagashira M, Tanaka A, Hisatani K, Isogai Y, Hori M, Takamatsu S, Fujibayashi Y, Yamamoto K, Haneda K, Inazu T, Toma K.

Glycoconj J. 2001 Jun;18(6):449-55.PMID: 12084980 [PubMed - indexed for MEDLINE]Related articles

Knowledge-based potential defined for a rotamer library to design protein sequences.

Ota M, Isogai Y, Nishikawa K.

Protein Eng. 2001 Aug;14(8):557-64.PMID: 11579224 [PubMed - indexed for MEDLINE]Related articlesFree article

Site-dependent effect of O-glycosylation on the conformation and biological activity of calcitonin.

Tagashira M, Iijima H, Isogai Y, Hori M, Takamatsu S, Fujibayashi Y, Yoshizawa-Kumagaye K, Isaka S, Nakajima K, Yamamoto T, Teshima T, Toma K.

Biochemistry. 2001 Sep 18;40(37):11090-5.PMID: 11551206 [PubMed - indexed for MEDLINE]Related articles

Structure of cytochrome c6 from the red alga Porphyra yezoensis at 1. 57 A resolution.

Yamada S, Park SY, Shimizu H, Koshizuka Y, Kadokura K, Satoh T, Suruga K, Ogawa M, Isogai Y, Nishio T, Shiro Y, Oku T.

Acta Crystallogr D Biol Crystallogr. 2000 Dec;56(Pt 12):1577-82.PMID: 11092924 [PubMed - indexed for MEDLINE]Related articles

Self-assembly of heme A and heme B in a designed four-helix bundle: implications for a cytochrome c oxidase maquette.

Gibney BR, Isogai Y, Rabanal F, Reddy KS, Grosset AM, Moser CC, Dutton PL.

Biochemistry. 2000 Sep 12;39(36):11041-9.PMID: 10998241 [PubMed - indexed for MEDLINE]Related articles

Expression, purification, and characterization of blasticidin S deaminase (BSD) from Aspergillus terreus: the role of catalytic zinc in enzyme structure.

Kimura M, Sekido S, Isogai Y, Yamaguchi I.

J Biochem. 2000 Jun;127(6):955-63.PMID: 10833262 [PubMed - indexed for MEDLINE]Related articles

Characterization and amino acid sequences of cytochromes c6 from two strains of the green alga Chlorella vulgaris.

Yamada S, Nakamura T, Tanaka Y, Isogai Y, Nishio T, Oku T.

Biosci Biotechnol Biochem. 2000 Mar;64(3):628-32.PMID: 10803970 [PubMed - indexed for MEDLINE]Related articlesFree article

Redesign of artificial globins: effects of residue replacements at hydrophobic sites on the structural properties.

Isogai Y, Ishii A, Fujisawa T, Ota M, Nishikawa K.

Biochemistry. 2000 May 16;39(19):5683-90.PMID: 10801318 [PubMed - indexed for MEDLINE]Related articles

Rat epididymal sperm motion changes induced by ethylene glycol monoethyl ether, sulfasalazine, and 2,5-hexandione.

Horimoto M, Isobe Y, Isogai Y, Tachibana M.

Reprod Toxicol. 2000 Jan-Feb;14(1):55-63.PMID: 10689203 [PubMed - indexed for MEDLINE]Related articles

Nitric oxide form of a pyridylphenylurea is a potent inducer of shoot formation in plant tissue cultures.

Kurosaki F, Arisawa M, Shudo K, Okamoto T, Isogai Y.

Anal Biochem. 2000 Feb 1;278(1):81-3. No abstract available. PMID: 10640357 [PubMed - indexed for MEDLINE]Related articles

Design and synthesis of a globin fold.

Isogai Y, Ota M, Fujisawa T, Izuno H, Mukai M, Nakamura H, Iizuka T, Nishikawa K.

Biochemistry. 1999 Jun 8;38(23):7431-43.PMID: 10360940 [PubMed - indexed for MEDLINE]Related articles

Matrix-assisted laser desorption ionization mass spectrometry for the analysis of monosulfated oligosaccharides.

Dai Y, Whittal RM, Bridges CA, Isogai Y, Hindsgaul O, Li L.

Carbohydr Res. 1997 Oct 28;304(1):1-9.PMID: 9403991 [PubMed - indexed for MEDLINE]Related articles

Rheological study of the dynamic process of fibrinolysis.

Kawakami S, Kaibara M, Nakayama M, Isogai Y, Ikemoto S, O'Rear EA, Lee JS.

Blood Coagul Fibrinolysis. 1997 Sep;8(6):351-9.PMID: 9351525 [PubMed - indexed for MEDLINE]Related articles

Structural requirement of highly-conserved residues in globins.

Ota M, Isogai Y, Nishikawa K.

FEBS Lett. 1997 Sep 29;415(2):129-33.PMID: 9350982 [PubMed - indexed for MEDLINE]Related articles

Mechanisms of nitroso compound-induced inhibition of superoxide generation in neutrophils: fluorescence quenching of perylene by nitroso-compounds in the membrane fractions of neutrophils.

Nasuda-Kouyama A, Nakata M, Iizuka T, Isogai Y.

J Biochem. 1997 Sep;122(3):550-5.PMID: 9348083 [PubMed - indexed for MEDLINE]Related articles

Effect of aromatic nitroso-compounds on superoxide-generating activity in neutrophils.

Nakata M, Nasuda-Kouyama A, Isogai Y, Kanegasaki S, Iizuka T.

J Biochem. 1997 Jul;122(1):188-92.PMID: 9276687 [PubMed - indexed for MEDLINE]Related articles

6'-Sulfo sialyl Lex but not 6-sulfo sialyl Lex expressed on the cell surface supports L-selectin-mediated adhesion.

Tsuboi S, Isogai Y, Hada N, King JK, Hindsgaul O, Fukuda M.

J Biol Chem. 1996 Nov 1;271(44):27213-6.PMID: 8910289 [PubMed - indexed for MEDLINE]Related articlesFree article

Calcitonin-induced changes in the cytoskeleton are mediated by a signal pathway associated with protein kinase A in osteoclasts.

Suzuki H, Nakamura I, Takahashi N, Ikuhara T, Matsuzaki K, Isogai Y, Hori M, Suda T.

Endocrinology. 1996 Nov;137(11):4685-90.PMID: 8895334 [PubMed - indexed for MEDLINE]Related articles

Parathyroid hormone regulates osteoblast differentiation positively or negatively depending on the differentiation stages.

Isogai Y, Akatsu T, Ishizuya T, Yamaguchi A, Hori M, Takahashi N, Suda T.

J Bone Miner Res. 1996 Oct;11(10):1384-93.PMID: 8889836 [PubMed - indexed for MEDLINE]Related articles

The alpha(1,3)fucosyltransferase Fuc-TVII controls leukocyte trafficking through an essential role in L-, E-, and P-selectin ligand biosynthesis.

Malý P, Thall A, Petryniak B, Rogers CE, Smith PL, Marks RM, Kelly RJ, Gersten KM, Cheng G, Saunders TL, Camper SA, Camphausen RT, Sullivan FX, Isogai Y, Hindsgaul O, von Andrian UH, Lowe JB.

Cell. 1996 Aug 23;86(4):643-53.PMID: 8752218 [PubMed - indexed for MEDLINE]Related articles

Direct measurement of oscillatory generation of superoxide anions by single phagocytes.

Isogai Y, Tsuyama T, Osada H, Iizuku T, Tanaka K.

FEBS Lett. 1996 Feb 19;380(3):263-6.PMID: 8601437 [PubMed - indexed for MEDLINE]Related articles

Resolution of the aerobic respiratory system of the thermoacidophilic archaeon, Sulfolobus sp. strain 7. II. Characterization of the archaeal terminal oxidase subcomplexes and implication for the intramolecular electron transfer.

Iwasaki T, Wakagi T, Isogai Y, Iizuka T, Oshima T.

J Biol Chem. 1995 Dec 29;270(52):30893-901.PMID: 8537343 [PubMed - indexed for MEDLINE]Related articlesFree article

Changes in auditory P300 event-related potentials and brainstem evoked potentials in diabetes mellitus.

Kurita A, Mochio S, Isogai Y.

Acta Neurol Scand. 1995 Oct;92(4):319-23.PMID: 8848938 [PubMed - indexed for MEDLINE]Related articles