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    Results: 1 to 50 of 167

    1.

    Identifying changes in selective constraints: host shifts in influenza.

    Tamuri AU, Dos Reis M, Hay AJ, Goldstein RA.

    PLoS Comput Biol. 2009 Nov;5(11):e1000564. Epub 2009 Nov 13.PMID: 19911053 [PubMed - in process]Related articlesFree article

    2.

    In silico biology.

    Fernando CT, Goldstein RA, Husbands P, Stekel DJ.

    Pac Symp Biocomput. 2010:477-80.PMID: 19908399 [PubMed - in process]Related articlesFree article

    3.

    Using Non-Homogeneous Models of Nucleotide Substitution to Identify Host Shift Events: Application to the Origin of the 1918 'Spanish' Influenza Pandemic Virus.

    Dos Reis M, Hay AJ, Goldstein RA.

    J Mol Evol. 2009 Sep 29. [Epub ahead of print]PMID: 19787384 [PubMed - as supplied by publisher]Related articlesFree article

    4.

    Cocaine: history, social implications, and toxicity: a review.

    Goldstein RA, DesLauriers C, Burda A, Johnson-Arbor K.

    Semin Diagn Pathol. 2009 Feb;26(1):10-7.PMID: 19292024 [PubMed - indexed for MEDLINE]Related articles

    5.

    Cocaine: history, social implications, and toxicity--a review.

    Goldstein RA, DesLauriers C, Burda AM.

    Dis Mon. 2009 Jan;55(1):6-38. Review. No abstract available. PMID: 19081448 [PubMed - indexed for MEDLINE]Related articles

    6.

    New ISSCR guidelines underscore major principles for responsible translational stem cell research.

    Hyun I, Lindvall O, Ahrlund-Richter L, Cattaneo E, Cavazzana-Calvo M, Cossu G, De Luca M, Fox IJ, Gerstle C, Goldstein RA, Hermerén G, High KA, Kim HO, Lee HP, Levy-Lahad E, Li L, Lo B, Marshak DR, McNab A, Munsie M, Nakauchi H, Rao M, Rooke HM, Valles CS, Srivastava A, Sugarman J, Taylor PL, Veiga A, Wong AL, Zoloth L, Daley GQ.

    Cell Stem Cell. 2008 Dec 4;3(6):607-9. Review.PMID: 19041777 [PubMed - indexed for MEDLINE]Related articles

    7.

    The promise of human induced pluripotent stem cells for research and therapy.

    Nishikawa S, Goldstein RA, Nierras CR.

    Nat Rev Mol Cell Biol. 2008 Sep;9(9):725-9. Review.PMID: 18698329 [PubMed - indexed for MEDLINE]Related articles

    8.

    Evolution of taxis responses in virtual bacteria: non-adaptive dynamics.

    Goldstein RA, Soyer OS.

    PLoS Comput Biol. 2008 May 23;4(5):e1000084.PMID: 18483577 [PubMed - indexed for MEDLINE]Related articlesFree article

    9.

    Changing selective pressure during antigenic changes in human influenza H3.

    Blackburne BP, Hay AJ, Goldstein RA.

    PLoS Pathog. 2008 May 2;4(5):e1000058.PMID: 18451985 [PubMed - indexed for MEDLINE]Related articlesFree article

    10.

    The structure of protein evolution and the evolution of protein structure.

    Goldstein RA.

    Curr Opin Struct Biol. 2008 Apr;18(2):170-7. Epub 2008 Mar 6. Review.PMID: 18328690 [PubMed - indexed for MEDLINE]Related articles

    11.

    The organization of two rRNA (rrn) operons of the slow-growing pathogen Mycobacterium celatum provides key insights into mycobacterial evolution.

    Stadthagen-Gomez G, Helguera-Repetto AC, Cerna-Cortes JF, Goldstein RA, Cox RA, Gonzalez-y-Merchand JA.

    FEMS Microbiol Lett. 2008 Mar;280(1):102-12. Epub 2008 Jan 31.PMID: 18248431 [PubMed - indexed for MEDLINE]Related articles

    12.

    Myocardial perfusion and function: single photon emission computed tomography.

    Hansen CL, Goldstein RA, Akinboboye OO, Berman DS, Botvinick EH, Churchwell KB, Cooke CD, Corbett JR, Cullom SJ, Dahlberg ST, Druz RS, Ficaro EP, Galt JR, Garg RK, Germano G, Heller GV, Henzlova MJ, Hyun MC, Johnson LL, Mann A, McCallister BD Jr, Quaife RA, Ruddy TD, Sundaram SN, Taillefer R, Ward RP, Mahmarian JJ; American Society of Nuclear Cardiology.

    J Nucl Cardiol. 2007 Nov-Dec;14(6):e39-60. Review. No abstract available. PMID: 18022099 [PubMed - indexed for MEDLINE]Related articles

    13.

    Amino-acid interactions in psychrophiles, mesophiles, thermophiles, and hyperthermophiles: insights from the quasi-chemical approximation.

    Goldstein RA.

    Protein Sci. 2007 Sep;16(9):1887-95.PMID: 17766385 [PubMed - indexed for MEDLINE]Related articlesFree article

    14.

    Myocardial perfusion and function single photon emission computed tomography.

    Hansen CL, Goldstein RA, Berman DS, Churchwell KB, Cooke CD, Corbett JR, Cullom SJ, Dahlberg ST, Galt JR, Garg RK, Heller GV, Hyun MC, Johnson LL, Mann A, McCallister BD Jr, Taillefer R, Ward RP, Mahmarian JJ; Quality Assurance Committee of the American Society of Nuclear Cardiology.

    J Nucl Cardiol. 2006 Nov;13(6):e97-120. No abstract available. PMID: 17174800 [PubMed - indexed for MEDLINE]Related articles

    15.

    Positron emission tomography myocardial perfusion and glucose metabolism imaging.

    Machac J, Bacharach SL, Bateman TM, Bax JJ, Beanlands R, Bengel F, Bergmann SR, Brunken RC, Case J, Delbeke D, DiCarli MF, Garcia EV, Goldstein RA, Gropler RJ, Travin M, Patterson R, Schelbert HR; Quality Assurance Committee of the American Society of Nuclear Cardiology.

    J Nucl Cardiol. 2006 Nov;13(6):e121-51. No abstract available. PMID: 17174789 [PubMed - indexed for MEDLINE]Related articles

    16.

    Emergent robustness in competition between autocatalytic chemical networks.

    Goldstein RA.

    Orig Life Evol Biosph. 2006 Aug;36(4):381-9. Epub 2006 Sep 14.PMID: 16972150 [PubMed - indexed for MEDLINE]Related articles

    17.

    Assessing the accuracy of ancestral protein reconstruction methods.

    Williams PD, Pollock DD, Blackburne BP, Goldstein RA.

    PLoS Comput Biol. 2006 Jun 23;2(6):e69. Epub 2006 Jun 23.PMID: 16789817 [PubMed - indexed for MEDLINE]Related articlesFree article

    18.

    Observations of amino acid gain and loss during protein evolution are explained by statistical bias.

    Goldstein RA, Pollock DD.

    Mol Biol Evol. 2006 Jul;23(7):1444-9. Epub 2006 May 11.PMID: 16698770 [PubMed - indexed for MEDLINE]Related articlesFree article

    19.

    Functionality and the evolution of marginal stability in proteins: Inferences from lattice simulations.

    Williams PD, Pollock DD, Goldstein RA.

    Evol Bioinform Online. 2007 Jan 16;2:91-101.PMID: 19455204 [PubMed - in process]Related articlesFree article

    20.

    Divergence, recombination and retention of functionality during protein evolution.

    Xu YO, Hall RW, Goldstein RA, Pollock DD.

    Hum Genomics. 2005 Sep;2(3):158-67.PMID: 16197733 [PubMed - indexed for MEDLINE]Related articles

    21.

    Human embryonic stem cell research and the Juvenile Diabetes Research Foundation International - a work in progress.

    Nierras CR, Stallard J, Goldstein RA, Insel R.

    Pediatr Diabetes. 2004;5 Suppl 2:94-8.PMID: 15601380 [PubMed - indexed for MEDLINE]Related articles

    22.

    Predicting functional sites in proteins: site-specific evolutionary models and their application to neurotransmitter transporters.

    Soyer OS, Goldstein RA.

    J Mol Biol. 2004 May 21;339(1):227-42.PMID: 15123434 [PubMed - indexed for MEDLINE]Related articles

    23.

    Performance of an iterated T-HMM for homology detection.

    Qian B, Goldstein RA.

    Bioinformatics. 2004 Sep 22;20(14):2175-80. Epub 2004 Mar 25.PMID: 15044240 [PubMed - indexed for MEDLINE]Related articlesFree article

    24.

    Ethical consideration of incidental findings on adult brain MRI in research.

    Illes J, Rosen AC, Huang L, Goldstein RA, Raffin TA, Swan G, Atlas SW.

    Neurology. 2004 Mar 23;62(6):888-90.PMID: 15037687 [PubMed - indexed for MEDLINE]Related articlesFree article

    25.

    Dimerization in aminergic G-protein-coupled receptors: application of a hidden-site class model of evolution.

    Soyer OS, Dimmic MW, Neubig RR, Goldstein RA.

    Biochemistry. 2003 Dec 16;42(49):14522-31.PMID: 14661965 [PubMed - indexed for MEDLINE]Related articles

    26.

    Probing conformational changes in neurotransmitter transporters: a structural context.

    Goldberg NR, Beuming T, Soyer OS, Goldstein RA, Weinstein H, Javitch JA.

    Eur J Pharmacol. 2003 Oct 31;479(1-3):3-12. Review.PMID: 14612133 [PubMed - indexed for MEDLINE]Related articles

    27.

    Depicting a protein's two faces: GPCR classification by phylogenetic tree-based HMMs.

    Qian B, Soyer OS, Neubig RR, Goldstein RA.

    FEBS Lett. 2003 Nov 6;554(1-2):95-9.PMID: 14596921 [PubMed - indexed for MEDLINE]Related articles

    28.

    Detecting distant homologs using phylogenetic tree-based HMMs.

    Qian B, Goldstein RA.

    Proteins. 2003 Aug 15;52(3):446-53.PMID: 12866055 [PubMed - indexed for MEDLINE]Related articles

    29.

    Optimization of a new score function for the generation of accurate alignments.

    Qian B, Goldstein RA.

    Proteins. 2002 Sep 1;48(4):605-10.PMID: 12211027 [PubMed - indexed for MEDLINE]Related articles

    30.

    rtREV: an amino acid substitution matrix for inference of retrovirus and reverse transcriptase phylogeny.

    Dimmic MW, Rest JS, Mindell DP, Goldstein RA.

    J Mol Evol. 2002 Jul;55(1):65-73.PMID: 12165843 [PubMed - indexed for MEDLINE]Related articles

    31.

    Performance evaluation of a new algorithm for the detection of remote homologs with sequence comparison.

    Kann MG, Goldstein RA.

    Proteins. 2002 Aug 1;48(2):367-76.PMID: 12112703 [PubMed - indexed for MEDLINE]Related articles

    32.

    Using evolutionary methods to study G-protein coupled receptors.

    Soyer O, Dimmic MW, Neubig RR, Goldstein RA.

    Pac Symp Biocomput. 2002:625-36.PMID: 11928514 [PubMed - indexed for MEDLINE]Related articlesFree article

    33.

    Why are proteins so robust to site mutations?

    Taverna DM, Goldstein RA.

    J Mol Biol. 2002 Jan 18;315(3):479-84.PMID: 11786027 [PubMed - indexed for MEDLINE]Related articles

    34.

    Why are proteins marginally stable?

    Taverna DM, Goldstein RA.

    Proteins. 2002 Jan 1;46(1):105-9.PMID: 11746707 [PubMed - indexed for MEDLINE]Related articles

    35.

    Distribution of Indel lengths.

    Qian B, Goldstein RA.

    Proteins. 2001 Oct 1;45(1):102-4.PMID: 11536366 [PubMed - indexed for MEDLINE]Related articles

    36.

    Evolution of functionality in lattice proteins.

    Williams PD, Pollock DD, Goldstein RA.

    J Mol Graph Model. 2001;19(1):150-6.PMID: 11381526 [PubMed - indexed for MEDLINE]Related articles

    37.

    Analyzing site heterogeneity during protein evolution.

    Koshi JM, Goldstein RA.

    Pac Symp Biocomput. 2001:191-202.PMID: 11262940 [PubMed - indexed for MEDLINE]Related articlesFree article

    38.

    Optimization of a new score function for the detection of remote homologs.

    Kann M, Qian B, Goldstein RA.

    Proteins. 2000 Dec 1;41(4):498-503.PMID: 11056037 [PubMed - indexed for MEDLINE]Related articles

    39.

    How to generate improved potentials for protein tertiary structure prediction: a lattice model study.

    Chiu TL, Goldstein RA.

    Proteins. 2000 Nov 1;41(2):157-63.PMID: 10966569 [PubMed - indexed for MEDLINE]Related articles

    40.

    Modeling evolution at the protein level using an adjustable amino acid fitness model.

    Dimmic MW, Mindell DP, Goldstein RA.

    Pac Symp Biocomput. 2000:18-29.PMID: 10902153 [PubMed - indexed for MEDLINE]Related articlesFree article

    41.

    Protein evolution and structural genomics

    Frishman D, Goldstein RA, Pollock DD.

    Pac Symp Biocomput. 2000;(12):3-5. No abstract available. PMID: 10902151 [PubMed - as supplied by publisher]Related articlesFree article

    42.

    The distribution of structures in evolving protein populations.

    Taverna DM, Goldstein RA.

    Biopolymers. 2000 Jan;53(1):1-8.PMID: 10644946 [PubMed - indexed for MEDLINE]Related articles

    43.

    Disseminated aspergillosis involving the brain: distribution and imaging characteristics.

    DeLone DR, Goldstein RA, Petermann G, Salamat MS, Miles JM, Knechtle SJ, Brown WD.

    AJNR Am J Neuroradiol. 1999 Oct;20(9):1597-604.PMID: 10543627 [PubMed - indexed for MEDLINE]Related articlesFree article

    44.

    Estimating the total number of protein folds.

    Govindarajan S, Recabarren R, Goldstein RA.

    Proteins. 1999 Jun 1;35(4):408-14.PMID: 10382668 [PubMed - indexed for MEDLINE]Related articles

    45.

    Effect of alphabet size and foldability requirements on protein structure designability.

    Buchler NE, Goldstein RA.

    Proteins. 1999 Jan 1;34(1):113-24.PMID: 10336377 [PubMed - indexed for MEDLINE]Related articles

    46.

    Using physical-chemistry-based substitution models in phylogenetic analyses of HIV-1 subtypes.

    Koshi JM, Mindell DP, Goldstein RA.

    Mol Biol Evol. 1999 Feb;16(2):173-9.PMID: 10028285 [PubMed - indexed for MEDLINE]Related articlesFree article

    47.

    Impact of Carbon Storage Through Restoration of Drylands on the Global Carbon Cycle

    Keller AA, Goldstein RA.

    Environ Manage. 1998 Sep;22(5):757-66.PMID: 9680543 [PubMed - as supplied by publisher]Related articles

    48.

    Optimizing potentials for the inverse protein folding problem.

    Chiu TL, Goldstein RA.

    Protein Eng. 1998 Sep;11(9):749-52.PMID: 9796822 [PubMed - indexed for MEDLINE]Related articlesFree article

    49.

    Models of natural mutations including site heterogeneity.

    Koshi JM, Goldstein RA.

    Proteins. 1998 Aug 15;32(3):289-95.PMID: 9715905 [PubMed - indexed for MEDLINE]Related articles

    50.

    Optimizing energy potentials for success in protein tertiary structure prediction.

    Chiu TL, Goldstein RA.

    Fold Des. 1998;3(3):223-8.PMID: 9669880 [PubMed - indexed for MEDLINE]Related articles

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