PubMed

Catalytic Water Co-Existing with a Product Peptide in the Active Site of HIV-1 Protease Revealed by X-Ray Structure Analysis.

Prashar V, Bihani S, Das A, Ferrer JL, Hosur M.

PLoS One. 2009 Nov 17;4(11):e7860.PMID: 19924250 [PubMed - as supplied by publisher]Related articles

Passive and active microrheology for cross-linked F-actin networks in vitro.

Lee H, Ferrer JM, Nakamura F, Lang MJ, Kamm RD.

Acta Biomater. 2009 Oct 31. [Epub ahead of print]PMID: 19883801 [PubMed - as supplied by publisher]Related articles

Critical role of Tryptophan 154 for the activity and stability of class D beta-lactamases.

Baurin S, Vercheval L, Bouillenne F, Falzone C, Brans A, Jacquamet L, Ferrer JL, Sauvage E, Dehareng D, Frere JM, Charlier P, Galleni M, Kerff F.

Biochemistry. 2009 Oct 27. [Epub ahead of print]PMID: 19860471 [PubMed - as supplied by publisher]Related articles

Age-Related Morphological Changes in Smooth Muscle and Collagen Content in Human Corpus Cavernosum.

Ferrer JE, Velez JD, Herrera AM.

J Sex Med. 2009 Sep 29. [Epub ahead of print]PMID: 19796056 [PubMed - as supplied by publisher]Related articles

A new basal sauropod dinosaur from the middle Jurassic of Niger and the early evolution of sauropoda.

Remes K, Ortega F, Fierro I, Joger U, Kosma R, Ferrer JM; Project PALDES; Niger Project SNHM, Ide OA, Maga A.

PLoS One. 2009 Sep 16;4(9):e6924.PMID: 19756139 [PubMed - in process]Related articlesFree article

Noninvasive Home Mechanical Ventilation in Elderly Patients.

Crespo A, Muñoz X, Torres F, Martí S, Ferrer J, Morell F.

Gerontology. 2009 Sep 10. [Epub ahead of print]PMID: 19752508 [PubMed - as supplied by publisher]Related articles

Struvite formation from the supernatants of an anaerobic digestion pilot plant.

Pastor L, Mangin D, Ferrer J, Seco A.

Bioresour Technol. 2010 Jan;101(1):118-25. Epub 2009 Sep 3.PMID: 19733058 [PubMed - in process]Related articles

Crystallization and preliminary X-ray crystallographic analysis of PhoK, an extracellular alkaline phosphatase from Sphingomonas sp. BSAR-1.

Nilgiriwala KS, Bihani SC, Das A, Prashar V, Kumar M, Ferrer JL, Apte SK, Hosur MV.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Sep 1;65(Pt 9):917-9. Epub 2009 Aug 22.PMID: 19724132 [PubMed - in process]Related articles

Resistance mechanism revealed by crystal structures of unliganded nelfinavir-resistant HIV-1 protease non-active site mutants N88D and N88S.

Bihani SC, Das A, Prashar V, Ferrer JL, Hosur MV.

Biochem Biophys Res Commun. 2009 Nov 13;389(2):295-300. Epub 2009 Aug 29.PMID: 19720046 [PubMed - indexed for MEDLINE]Related articles

Cyclic olefin homopolymer-based microfluidics for protein crystallization and in situ X-ray diffraction.

Emamzadah S, Petty TJ, De Almeida V, Nishimura T, Joly J, Ferrer JL, Halazonetis TD.

Acta Crystallogr D Biol Crystallogr. 2009 Sep;65(Pt 9):913-20. Epub 2009 Aug 6.PMID: 19690369 [PubMed - in process]Related articlesFree article

IOFF generally extends fluorophore longevity in the presence of an optical trap.

Ferrer JM, Fangyuan D, Brau RR, Tarsa PB, Lang MJ.

Curr Pharm Biotechnol. 2009 Aug;10(5):502-7.PMID: 19689318 [PubMed - indexed for MEDLINE]Related articles

First-principles study of electron transport through the single-molecule magnet Mn12.

Barraza-Lopez S, Park K, García-Suárez V, Ferrer J.

Phys Rev Lett. 2009 Jun 19;102(24):246801. Epub 2009 Jun 18.PMID: 19659035 [PubMed]Related articles

PDX1 deficiency causes mitochondrial dysfunction and defective insulin secretion through TFAM suppression.

Gauthier BR, Wiederkehr A, Baquié M, Dai C, Powers AC, Kerr-Conte J, Pattou F, MacDonald RJ, Ferrer J, Wollheim CB.

Cell Metab. 2009 Aug;10(2):110-8.PMID: 19656489 [PubMed - indexed for MEDLINE]Related articles

The complete genomic sequence of an in vivo low replicating BLV strain.

Dube S, Abbott L, Dube DK, Dolcini G, Gutierrez S, Ceriani C, Juliarena M, Ferrer J, Perzova R, Poiesz BJ.

Virol J. 2009 Aug 3;6:120.PMID: 19650931 [PubMed - indexed for MEDLINE]Related articlesFree article

[Breast MRI: the usefulness of diffusion-weighted sequences for differentiating between benign and malignant lesions.]

Barceló J, Vilanova JC, Albanell J, Ferrer J, Castañer F, Viejo N, Argelaguet M.

Radiologia. 2009 Sep-Oct;51(5):469-76. Epub 2009 Aug 3. Spanish. PMID: 19647840 [PubMed - in process]Related articles

[Controversies in living donor liver transplants.]

García-Valdecasas JC, Calatayud D, Fuster J, Fondevila C, Sánchez S, García R, Modolo M, Ferrer J.

Cir Esp. 2009 Nov;86(5):278-82. Epub 2009 Jul 9. Spanish. PMID: 19545863 [PubMed - in process]Related articlesFree article

Structural characterization of the active form of PerR: insights into the metal-induced activation of PerR and Fur proteins for DNA binding.

Jacquamet L, Traoré DA, Ferrer JL, Proux O, Testemale D, Hazemann JL, Nazarenko E, El Ghazouani A, Caux-Thang C, Duarte V, Latour JM.

Mol Microbiol. 2009 Jul;73(1):20-31. Epub 2009 Jun 8.PMID: 19508285 [PubMed - indexed for MEDLINE]Related articles

Structural basis for delivery of the intact [Fe2S2] cluster by monothiol glutaredoxin.

Iwema T, Picciocchi A, Traore DA, Ferrer JL, Chauvat F, Jacquamet L.

Biochemistry. 2009 Jul 7;48(26):6041-3.PMID: 19505088 [PubMed - indexed for MEDLINE]Related articles

Host soluble factors that regulate the synthesis of the major core protein of the bovine leukemia virus (BLV) in a naturally infected neoplastic B-cell line.

Gutiérrez S, Ceriani C, Juliarena M, Ferrer JF.

Vet Immunol Immunopathol. 2009 Oct 15;131(3-4):246-58. Epub 2009 May 4.PMID: 19497626 [PubMed - in process]Related articles

Prognostic factors and time-related changes influence results of colorectal liver metastases surgical treatment: a single-center analysis.

Martí J, Modolo MM, Fuster J, Comas J, Cosa R, Ferrer J, Molina V, Romero J, Fondevila C, Charco R, García-Valdecasas JC.

World J Gastroenterol. 2009 Jun 7;15(21):2587-94.PMID: 19496187 [PubMed - indexed for MEDLINE]Related articlesFree article

Characteristics of patients admitted for the first time for COPD exacerbation.

Balcells E, Antó JM, Gea J, Gómez FP, Rodríguez E, Marin A, Ferrer A, de Batlle J, Farrero E, Benet M, Orozco-Levi M, Ferrer J, Agustí AG, Gáldiz JB, Belda J, Garcia-Aymerich J; PAC-COPD Study Group.

Respir Med. 2009 Sep;103(9):1293-302. Epub 2009 May 8.PMID: 19427776 [PubMed - in process]Related articles

Microfluidic chips for the crystallization of biomacromolecules by counter-diffusion and on-chip crystal X-ray analysis.

Dhouib K, Khan Malek C, Pfleging W, Gauthier-Manuel B, Duffait R, Thuillier G, Ferrigno R, Jacquamet L, Ohana J, Ferrer JL, Théobald-Dietrich A, Giegé R, Lorber B, Sauter C.

Lab Chip. 2009 May 21;9(10):1412-21. Epub 2009 Mar 2.PMID: 19417908 [PubMed - indexed for MEDLINE]Related articles

SABATH methyltransferases from white spruce (Picea glauca): gene cloning, functional characterization and structural analysis.

Zhao N, Boyle B, Duval I, Ferrer JL, Lin H, Seguin A, Mackay J, Chen F.

Tree Physiol. 2009 Jul;29(7):947-57. Epub 2009 Apr 14.PMID: 19369216 [PubMed - in process]Related articles

Crystallization and preliminary X-ray analysis of D-2-hydroxyacid dehydrogenase from Haloferax mediterranei.

Domenech J, Baker PJ, Sedelnikova SE, Rodgers HF, Rice DW, Ferrer J.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Apr 1;65(Pt 4):415-8. Epub 2009 Mar 26.PMID: 19342795 [PubMed - indexed for MEDLINE]Related articles

Crystallization and preliminary X-ray diffraction analysis of human seminal plasma protein PSP94.

Kumar M, Jagtap DD, Mahale SD, Prashar V, Kumar A, Das A, Bihani SC, Ferrer JL, Hosur MV, Ramanadham M.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Apr 1;65(Pt 4):389-91. Epub 2009 Mar 25.PMID: 19342788 [PubMed - indexed for MEDLINE]Related articles

Hnf1alpha (MODY3) controls tissue-specific transcriptional programs and exerts opposed effects on cell growth in pancreatic islets and liver.

Servitja JM, Pignatelli M, Maestro MA, Cardalda C, Boj SF, Lozano J, Blanco E, Lafuente A, McCarthy MI, Sumoy L, Guigó R, Ferrer J.

Mol Cell Biol. 2009 Jun;29(11):2945-59. Epub 2009 Mar 16.PMID: 19289501 [PubMed - indexed for MEDLINE]Related articles

Determination of phytoplankton composition using absorption spectra.

Martínez-Guijarro R, Romero I, Pachés M, Del Río JG, Martí CM, Gil G, Ferrer-Riquelme A, Ferrer J.

Talanta. 2009 May 15;78(3):814-9. Epub 2009 Jan 23.PMID: 19269434 [PubMed - indexed for MEDLINE]Related articles

[Phenotypic heterogeneity of chronic obstructive pulmonary disease]

Garcia-Aymerich J, Agustí A, Barberà JA, Belda J, Farrero E, Ferrer A, Ferrer J, Gáldiz JB, Gea J, Gómez FP, Monsó E, Morera J, Roca J, Sauleda J, Antó JM; en nombre del Grupo de Trabajo sobre la Caracterización Fenotípica y Evolución de la Enfermedad Pulmonar Obstructiva Crónica (PAC-COPD).

Arch Bronconeumol. 2009 Mar;45(3):129-38. Epub 2009 Feb 25. Review. Spanish. PMID: 19246148 [PubMed - indexed for MEDLINE]Related articlesFree article

Mathematical modelling methodologies in predictive food microbiology: a SWOT analysis.

Ferrer J, Prats C, López D, Vives-Rego J.

Int J Food Microbiol. 2009 Aug 31;134(1-2):2-8. Epub 2009 Jan 24. Review.PMID: 19217180 [PubMed - indexed for MEDLINE]Related articles

Functional targets of the monogenic diabetes transcription factors HNF-1alpha and HNF-4alpha are highly conserved between mice and humans.

Boj SF, Servitja JM, Martin D, Rios M, Talianidis I, Guigo R, Ferrer J.

Diabetes. 2009 May;58(5):1245-53. Epub 2009 Feb 2.PMID: 19188435 [PubMed - indexed for MEDLINE]Related articlesFree article

Active site dynamics in the zinc-dependent medium chain alcohol dehydrogenase superfamily.

Baker PJ, Britton KL, Fisher M, Esclapez J, Pire C, Bonete MJ, Ferrer J, Rice DW.

Proc Natl Acad Sci U S A. 2009 Jan 20;106(3):779-84. Epub 2009 Jan 8.PMID: 19131516 [PubMed - indexed for MEDLINE]Related articlesFree article

Control of liver glycogen synthase activity and intracellular distribution by phosphorylation.

Ros S, García-Rocha M, Domínguez J, Ferrer JC, Guinovart JJ.

J Biol Chem. 2009 Mar 6;284(10):6370-8. Epub 2009 Jan 5.PMID: 19124463 [PubMed - indexed for MEDLINE]Related articles

Upgrade of the CATS sample changer on FIP-BM30A at the ESRF: towards a commercialized standard.

Jacquamet L, Joly J, Bertoni A, Charrault P, Pirocchi M, Vernede X, Bouis F, Borel F, Périn JP, Denis T, Rechatin JL, Ferrer JL.

J Synchrotron Radiat. 2009 Jan;16(Pt 1):14-21. Epub 2008 Nov 14.PMID: 19096169 [PubMed]Related articles

Optimization of liver grafts in liver retransplantation: a European single-center experience.

Martí J, Charco R, Ferrer J, Calatayud D, Rimola A, Navasa M, Fondevila C, Fuster J, García-Valdecasas JC.

Surgery. 2008 Nov;144(5):762-9. Epub 2008 Sep 3.PMID: 19081018 [PubMed - indexed for MEDLINE]Related articles

Structural and functional characterization of 2-oxo-histidine in oxidized PerR protein.

Traoré DA, El Ghazouani A, Jacquamet L, Borel F, Ferrer JL, Lascoux D, Ravanat JL, Jaquinod M, Blondin G, Caux-Thang C, Duarte V, Latour JM.

Nat Chem Biol. 2009 Jan;5(1):53-9. Epub 2008 Dec 14.PMID: 19079268 [PubMed - indexed for MEDLINE]Related articles

Pig pancreas anatomy: implications for pancreas procurement, preservation, and islet isolation.

Ferrer J, Scott WE 3rd, Weegman BP, Suszynski TM, Sutherland DE, Hering BJ, Papas KK.

Transplantation. 2008 Dec 15;86(11):1503-10.PMID: 19077881 [PubMed - indexed for MEDLINE]Related articles

Crystal structure of the ligand-binding domain of the retinoid X receptor from the ascidian Polyandrocarpa misakiensis.

Borel F, de Groot A, Juillan-Binard C, de Rosny E, Laudet V, Pebay-Peyroula E, Fontecilla-Camps JC, Ferrer JL.

Proteins. 2009 Feb 1;74(2):538-42. No abstract available. PMID: 19004016 [PubMed - indexed for MEDLINE]Related articles

Effect of the haematocrit layer geometry on Plasmodium falciparum static thin-layer in vitro cultures.

Ferrer J, Rosal MD, Vidal JM, Prats C, Valls J, Herreros EA, López D, Gargallo D.

Malar J. 2008 Oct 8;7:203.PMID: 18842144 [PubMed - indexed for MEDLINE]Related articlesFree article

Effects of D-003, a mixture of sugarcane wax acids, on platelet aggregation in hypercholesterolemic patients. A dose-titration, randomised, placebo-controlled trial.

Arruzazabala Mde L, Molina V, López E, Castaño G, Fernández L, Carbajal D, Mas R, Ferrer JI, Mendoza S, Ramírez Y.

Arzneimittelforschung. 2008;58(8):376-84.PMID: 18807577 [PubMed - indexed for MEDLINE]Related articles

Optimisation of sludge line management to enhance phosphorus recovery in WWTP.

Marti N, Ferrer J, Seco A, Bouzas A.

Water Res. 2008 Nov;42(18):4609-18. Epub 2008 Aug 20.PMID: 18786693 [PubMed - indexed for MEDLINE]Related articles

ZAP-70 mRNA expression provides clinically valuable information in early-stage chronic lymphocytic leukemia.

Reinoso-Martín C, Jantus-Lewintre E, Ballesteros CG, Campos CB, Ferrer JR, García-Conde J.

Haematologica. 2008 Sep;93(9):1422-4. No abstract available. PMID: 18757853 [PubMed - indexed for MEDLINE]Related articlesFree article

X-ray structure of HIV-1 protease in situ product complex.

Bihani S, Das A, Prashar V, Ferrer JL, Hosur MV.

Proteins. 2009 Feb 15;74(3):594-602.PMID: 18704947 [PubMed - indexed for MEDLINE]Related articles

Calcium phosphate precipitation in a SBR operated for EBPR: interactions with the biological process.

Barat R, Montoya T, Borras L, Ferrer J, Seco A.

Water Sci Technol. 2008;58(2):427-33.PMID: 18701796 [PubMed - indexed for MEDLINE]Related articles

Impact of occupational exposure on severity of COPD.

Rodríguez E, Ferrer J, Martí S, Zock JP, Plana E, Morell F.

Chest. 2008 Dec;134(6):1237-43. Epub 2008 Aug 8.PMID: 18689596 [PubMed - indexed for MEDLINE]Related articles

AdcAII, a new pneumococcal Zn-binding protein homologous with ABC transporters: biochemical and structural analysis.

Loisel E, Jacquamet L, Serre L, Bauvois C, Ferrer JL, Vernet T, Di Guilmi AM, Durmort C.

J Mol Biol. 2008 Sep 5;381(3):594-606. Epub 2008 Jun 3.PMID: 18632116 [PubMed - indexed for MEDLINE]Related articles

Detection and prevention of enhanced biological phosphorus removal deterioration caused by Zoogloea overabundance.

Montoya T, Borrás L, Aguado D, Ferrer J, Seco A.

Environ Technol. 2008 Jan;29(1):35-42.PMID: 18610543 [PubMed - indexed for MEDLINE]Related articles

Measuring molecular rupture forces between single actin filaments and actin-binding proteins.

Ferrer JM, Lee H, Chen J, Pelz B, Nakamura F, Kamm RD, Lang MJ.

Proc Natl Acad Sci U S A. 2008 Jul 8;105(27):9221-6. Epub 2008 Jun 30.PMID: 18591676 [PubMed - indexed for MEDLINE]Related articlesFree article

[Rate and characteristics of asthma exacerbations: the ASMAB I study]

Morell F, Genover T, Muñoz X, García-Aymerich J, Ferrer J, Cruz MJ.

Arch Bronconeumol. 2008 Jun;44(6):303-11. Spanish. PMID: 18559219 [PubMed - indexed for MEDLINE]Related articlesFree article

Crystal structure of the cold-active aminopeptidase from Colwellia psychrerythraea, a close structural homologue of the human bifunctional leukotriene A4 hydrolase.

Bauvois C, Jacquamet L, Huston AL, Borel F, Feller G, Ferrer JL.

J Biol Chem. 2008 Aug 22;283(34):23315-25. Epub 2008 Jun 6.PMID: 18539590 [PubMed - indexed for MEDLINE]Related articlesFree article

Interactions between calcium precipitation and the polyphosphate-accumulating bacteria metabolism.

Barat R, Montoya T, Borrás L, Ferrer J, Seco A.

Water Res. 2008 Jul;42(13):3415-24. Epub 2008 May 15.PMID: 18538819 [PubMed - indexed for MEDLINE]Related articles