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    Gm14410 predicted gene 14410 [ Mus musculus (house mouse) ]

    Gene ID: 100043403, updated on 8-Feb-2024

    Summary

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    Official Symbol
    Gm14410provided by MGI
    Official Full Name
    predicted gene 14410provided by MGI
    Primary source
    MGI:MGI:3709158
    See related
    Ensembl:ENSMUSG00000078870 AllianceGenome:MGI:3709158
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Ubiquitous expression in subcutaneous fat pad adult (RPKM 8.9), genital fat pad adult (RPKM 8.4) and 27 other tissues See more
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    Genomic context

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    See Gm14410 in Genome Data Viewer
    Location:
    2 H4; 2 99.25 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (176882368..176898289, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (177190575..177206497, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene zinc finger protein 120-like Neighboring gene STARR-seq mESC enhancer starr_06664 Neighboring gene predicted gene 14411 Neighboring gene STARR-seq mESC enhancer starr_06665 Neighboring gene STARR-seq mESC enhancer starr_06666 Neighboring gene predicted gene 14413 Neighboring gene STARR-seq mESC enhancer starr_06667 Neighboring gene STARR-seq mESC enhancer starr_06668 Neighboring gene predicted gene 14400 Neighboring gene zinc finger protein 1010

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. EUCOMM--the European conditional mouse mutagenesis program. Friedel RH, et al. Brief Funct Genomic Proteomic, 2007 Sep. PMID 17967808
    2. A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Hansen J, et al. Proc Natl Acad Sci U S A, 2003 Aug 19. PMID 12904583, Free PMC Article
    3. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
    4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein LOC100043403
    Names
    KRAB box and zinc finger, C2H2 type domain containing protein
    novel KRAB box and zinc finger, C2H2 type domain containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001374129.1 → NP_001361058.1  uncharacterized protein LOC100043403

      Status: VALIDATED

      Source sequence(s)
      AL845491
      Consensus CDS
      CCDS89602.1
      UniProtKB/TrEMBL
      A2ARW1
      Related
      ENSMUSP00000114668.2, ENSMUST00000133301.9
      Conserved Domains (4) summary
      COG5048
      Location:168 → 362
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:161 → 181
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:3 → 44
      KRAB; KRAB box
      pfam13465
      Location:145 → 170
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      176882368..176898289 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001113806.1: Suppressed sequence

      Description
      NM_001113806.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
    Nucleotide Protein Strain
    Heading Accession and Version

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