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    Results: 1 to 20 of 101

    1.

    GTC: A web server for integrating systems biology data with web tools and desktop applications.

    Tenenbaum D, Bare JC, Baliga NS.

    Source Code Biol Med. 2010 Jul 13;5:7.

    PMID:
    20626906
    [PubMed]
    Free PMC Article
    2.

    The Firegoose: two-way integration of diverse data from different bioinformatics web resources with desktop applications.

    Bare JC, Shannon PT, Schmid AK, Baliga NS.

    BMC Bioinformatics. 2007 Nov 19;8:456.

    PMID:
    18021453
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Opal web services for biomedical applications.

    Ren J, Williams N, Clementi L, Krishnan S, Li WW.

    Nucleic Acids Res. 2010 Jul;38(Web Server issue):W724-31. Epub 2010 Jun 6.

    PMID:
    20529877
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    The Gaggle: an open-source software system for integrating bioinformatics software and data sources.

    Shannon PT, Reiss DJ, Bonneau R, Baliga NS.

    BMC Bioinformatics. 2006 Mar 28;7:176.

    PMID:
    16569235
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    maxdLoad2 and maxdBrowse: standards-compliant tools for microarray experimental annotation, data management and dissemination.

    Hancock D, Wilson M, Velarde G, Morrison N, Hayes A, Hulme H, Wood AJ, Nashar K, Kell DB, Brass A.

    BMC Bioinformatics. 2005 Nov 3;6:264.

    PMID:
    16269077
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Versatile annotation and publication quality visualization of protein complexes using POLYVIEW-3D.

    Porollo A, Meller J.

    BMC Bioinformatics. 2007 Aug 29;8:316.

    PMID:
    17727718
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    mu-CS: an extension of the TM4 platform to manage Affymetrix binary data.

    Guzzi PH, Cannataro M.

    BMC Bioinformatics. 2010 Jun 10;11:315.

    PMID:
    20537149
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Googling DNA sequences on the World Wide Web.

    Hajibabaei M, Singer GA.

    BMC Bioinformatics. 2009 Nov 10;10 Suppl 14:S4.

    PMID:
    19900300
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    BioNetBuilder2.0: bringing systems biology to chicken and other model organisms.

    Konieczka JH, Drew K, Pine A, Belasco K, Davey S, Yatskievych TA, Bonneau R, Antin PB.

    BMC Genomics. 2009 Jul 14;10 Suppl 2:S6.

    PMID:
    19607657
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    Accessing the SEED genome databases via Web services API: tools for programmers.

    Disz T, Akhter S, Cuevas D, Olson R, Overbeek R, Vonstein V, Stevens R, Edwards RA.

    BMC Bioinformatics. 2010 Jun 14;11:319.

    PMID:
    20546611
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Creating web applications for spatial epidemiological analysis and mapping in R using Rwui.

    Newton R, Deonarine A, Wernisch L.

    Source Code Biol Med. 2011 Apr 1;6(1):6.

    PMID:
    21457547
    [PubMed]
    Free PMC Article
    12.

    GeneTools--application for functional annotation and statistical hypothesis testing.

    Beisvag V, Jünge FK, Bergum H, Jølsum L, Lydersen S, Günther CC, Ramampiaro H, Langaas M, Sandvik AK, Laegreid A.

    BMC Bioinformatics. 2006 Oct 24;7:470.

    PMID:
    17062145
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    Web-based interactive 2D/3D medical image processing and visualization software.

    Mahmoudi SE, Akhondi-Asl A, Rahmani R, Faghih-Roohi S, Taimouri V, Sabouri A, Soltanian-Zadeh H.

    Comput Methods Programs Biomed. 2010 May;98(2):172-82.

    PMID:
    20022133
    [PubMed - indexed for MEDLINE]
    14.

    The Medicago truncatula gene expression atlas web server.

    He J, Benedito VA, Wang M, Murray JD, Zhao PX, Tang Y, Udvardi MK.

    BMC Bioinformatics. 2009 Dec 22;10:441.

    PMID:
    20028527
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    Biosphere: the interoperation of web services in microarray cluster analysis.

    Cheung KH, de Knikker R, Guo Y, Zhong G, Hager J, Yip KY, Kwan AK, Li P, Cheung DW.

    Appl Bioinformatics. 2004;3(4):253-6.

    PMID:
    15702956
    [PubMed - indexed for MEDLINE]
    16.

    PSAT: a web tool to compare genomic neighborhoods of multiple prokaryotic genomes.

    Fong C, Rohmer L, Radey M, Wasnick M, Brittnacher MJ.

    BMC Bioinformatics. 2008 Mar 26;9:170.

    PMID:
    18366802
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    Jalview Version 2--a multiple sequence alignment editor and analysis workbench.

    Waterhouse AM, Procter JB, Martin DM, Clamp M, Barton GJ.

    Bioinformatics. 2009 May 1;25(9):1189-91. Epub 2009 Jan 16.

    PMID:
    19151095
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    18.

    bioNMF: a web-based tool for nonnegative matrix factorization in biology.

    Mejía-Roa E, Carmona-Saez P, Nogales R, Vicente C, Vázquez M, Yang XY, García C, Tirado F, Pascual-Montano A.

    Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W523-8. Epub 2008 May 30.

    PMID:
    18515346
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    EMAAS: an extensible grid-based rich internet application for microarray data analysis and management.

    Barton G, Abbott J, Chiba N, Huang DW, Huang Y, Krznaric M, Mack-Smith J, Saleem A, Sherman BT, Tiwari B, Tomlinson C, Aitman T, Darlington J, Game L, Sternberg MJ, Butcher SA.

    BMC Bioinformatics. 2008 Nov 25;9:493.

    PMID:
    19032776
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    The Multi-Q web server for multiplexed protein quantitation.

    Yu CY, Tsui YH, Yian YH, Sung TY, Hsu WL.

    Nucleic Acids Res. 2007 Jul;35(Web Server issue):W707-12. Epub 2007 Jun 6.

    PMID:
    17553828
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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