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    Results: 1 to 20 of 108

    1.

    De-identifying Swedish clinical text - refinement of a gold standard and experiments with Conditional random fields.

    Dalianis H, Velupillai S.

    J Biomed Semantics. 2010 Apr 12;1(1):6.

    PMID:
    20618985
    [PubMed - in process]
    Free PMC Article
    2.

    Developing a standard for de-identifying electronic patient records written in Swedish: precision, recall and F-measure in a manual and computerized annotation trial.

    Velupillai S, Dalianis H, Hassel M, Nilsson GH.

    Int J Med Inform. 2009 Dec;78(12):e19-26. Epub 2009 May 23.

    PMID:
    19482543
    [PubMed - indexed for MEDLINE]
    3.

    Inductive creation of an annotation schema and a reference standard for de-identification of VA electronic clinical notes.

    Mayer J, Shen S, South BR, Meystre S, Friedlin FJ, Ray WR, Samore M.

    AMIA Annu Symp Proc. 2009 Nov 14;2009:416-20.

    PMID:
    20351891
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    Assessment of NER solutions against the first and second CALBC Silver Standard Corpus.

    Rebholz-Schuhmann D, Yepes AJ, Li C, Kafkas S, Lewin I, Kang N, Corbett P, Milward D, Buyko E, Beisswanger E, Hornbostel K, Kouznetsov A, Witte R, Laurila JB, Baker CJ, Kuo CJ, Clematide S, Rinaldi F, Farkas R, Móra G, Hara K, Furlong LI, Rautschka M, Neves ML, Pascual-Montano A, Wei Q, Collier N, Chowdhury MF, Lavelli A, Berlanga R, Morante R, Van Asch V, Daelemans W, Marina JL, van Mulligen E, Kors J, Hahn U.

    J Biomed Semantics. 2011 Oct 6;2 Suppl 5:S11.

    PMID:
    22166494
    [PubMed - in process]
    Free PMC Article
    5.

    Automatic de-identification of textual documents in the electronic health record: a review of recent research.

    Meystre SM, Friedlin FJ, South BR, Shen S, Samore MH.

    BMC Med Res Methodol. 2010 Aug 2;10:70. Review.

    PMID:
    20678228
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Developing a manually annotated clinical document corpus to identify phenotypic information for inflammatory bowel disease.

    South BR, Shen S, Jones M, Garvin J, Samore MH, Chapman WW, Gundlapalli AV.

    BMC Bioinformatics. 2009 Sep 17;10 Suppl 9:S12.

    PMID:
    19761566
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    De-identification of primary care electronic medical records free-text data in Ontario, Canada.

    Tu K, Klein-Geltink J, Mitiku TF, Mihai C, Martin J.

    BMC Med Inform Decis Mak. 2010 Jun 18;10:35.

    PMID:
    20565894
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Final Report on Carcinogens Background Document for Formaldehyde.

    National Toxicology Program.

    Rep Carcinog Backgr Doc. 2010 Jan;(10-5981):i-512.

    PMID:
    20737003
    [PubMed - as supplied by publisher]
    9.

    Evaluating the state-of-the-art in automatic de-identification.

    Uzuner O, Luo Y, Szolovits P.

    J Am Med Inform Assoc. 2007 Sep-Oct;14(5):550-63. Epub 2007 Jun 28.

    PMID:
    17600094
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    New directions in biomedical text annotation: definitions, guidelines and corpus construction.

    Wilbur WJ, Rzhetsky A, Shatkay H.

    BMC Bioinformatics. 2006 Jul 25;7:356.

    PMID:
    16867190
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    A methodology to enhance spatial understanding of disease outbreak events reported in news articles.

    Chanlekha H, Collier N.

    Int J Med Inform. 2010 Apr;79(4):284-96. Epub 2010 Feb 13.

    PMID:
    20153972
    [PubMed - indexed for MEDLINE]
    12.

    Anaphoric relations in the clinical narrative: corpus creation.

    Savova GK, Chapman WW, Zheng J, Crowley RS.

    J Am Med Inform Assoc. 2011 Jul-Aug;18(4):459-65. Epub 2011 Apr 1.

    PMID:
    21459927
    [PubMed - indexed for MEDLINE]
    Free Article
    13.

    Behavioral interventions to reduce risk for sexual transmission of HIV among men who have sex with men.

    Johnson WD, Diaz RM, Flanders WD, Goodman M, Hill AN, Holtgrave D, Malow R, McClellan WM.

    Cochrane Database Syst Rev. 2008 Jul 16;(3):CD001230. Review.

    PMID:
    18646068
    [PubMed - indexed for MEDLINE]
    14.

    The gene normalization task in BioCreative III.

    Lu Z, Kao HY, Wei CH, Huang M, Liu J, Kuo CJ, Hsu CN, Tsai RT, Dai HJ, Okazaki N, Cho HC, Gerner M, Solt I, Agarwal S, Liu F, Vishnyakova D, Ruch P, Romacker M, Rinaldi F, Bhattacharya S, Srinivasan P, Liu H, Torii M, Matos S, Campos D, Verspoor K, Livingston KM, Wilbur WJ.

    BMC Bioinformatics. 2011 Oct 3;12 Suppl 8:S2.

    PMID:
    22151901
    [PubMed - in process]
    Free PMC Article
    15.

    Assessing the difficulty and time cost of de-identification in clinical narratives.

    Dorr DA, Phillips WF, Phansalkar S, Sims SA, Hurdle JF.

    Methods Inf Med. 2006;45(3):246-52.

    PMID:
    16685332
    [PubMed - indexed for MEDLINE]
    16.

    Semi-automatic semantic annotation of PubMed queries: a study on quality, efficiency, satisfaction.

    Névéol A, Islamaj Doğan R, Lu Z.

    J Biomed Inform. 2011 Apr;44(2):310-8. Epub 2010 Nov 20.

    PMID:
    21094696
    [PubMed - indexed for MEDLINE]
    17.

    Developing a manually annotated clinical document corpus to identify phenotypic information for inflammatory bowel disease.

    South BR, Shen S, Jones M, Garvin J, Samore MH, Chapman WW, Gundlapalli AV.

    Summit on Translat Bioinforma. 2009 Mar 1;2009:1-32.

    PMID:
    21347157
    [PubMed]
    Free PMC Article
    18.

    A de-identifier for medical discharge summaries.

    Uzuner O, Sibanda TC, Luo Y, Szolovits P.

    Artif Intell Med. 2008 Jan;42(1):13-35. Epub 2007 Nov 28.

    PMID:
    18053696
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    Automating classification of free-text electronic health records for epidemiological studies.

    Schuemie MJ, Sen E, 't Jong GW, van Soest EM, Sturkenboom MC, Kors JA.

    Pharmacoepidemiol Drug Saf. 2012 Jan 24. doi: 10.1002/pds.3205. [Epub ahead of print]

    PMID:
    22271492
    [PubMed - as supplied by publisher]
    20.

    Extracting diagnoses and investigation results from unstructured text in electronic health records by semi-supervised machine learning.

    Wang Z, Shah AD, Tate AR, Denaxas S, Shawe-Taylor J, Hemingway H.

    PLoS One. 2012;7(1):e30412. Epub 2012 Jan 19.

    PMID:
    22276193
    [PubMed - in process]
    Free PMC Article

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