PubMed

Heads or tails: L1 insertion-associated 5' homopolymeric sequences.

Meyer TJ, Srikanta D, Conlin EM, Batzer MA.

Mob DNA. 2010 Feb 1;1(1):7.PMID: 20226075 [PubMed - in process]Free PMC ArticleFree textRelated citations

Twin priming: a proposed mechanism for the creation of inversions in L1 retrotransposition.

Ostertag EM, Kazazian HH Jr.

Genome Res. 2001 Dec;11(12):2059-65.PMID: 11731496 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Internal priming: an opportunistic pathway for L1 and Alu retrotransposition in hominins.

Srikanta D, Sen SK, Conlin EM, Batzer MA.

Gene. 2009 Dec 15;448(2):233-41. Epub 2009 Jun 6.PMID: 19501635 [PubMed - indexed for MEDLINE]Related citations

Following the LINEs: an analysis of primate genomic variation at human-specific LINE-1 insertion sites.

Vincent BJ, Myers JS, Ho HJ, Kilroy GE, Walker JA, Watkins WS, Jorde LB, Batzer MA.

Mol Biol Evol. 2003 Aug;20(8):1338-48. Epub 2003 May 30.PMID: 12777507 [PubMed - indexed for MEDLINE]Free ArticleRelated citations

Molecular archeology of L1 insertions in the human genome.

Szak ST, Pickeral OK, Makalowski W, Boguski MS, Landsman D, Boeke JD.

Genome Biol. 2002 Sep 19;3(10):research0052. Epub 2002 Sep 19.PMID: 12372140 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

The structures of mouse and human L1 elements reflect their insertion mechanism.

Martin SL, Li WL, Furano AV, Boissinot S.

Cytogenet Genome Res. 2005;110(1-4):223-8.PMID: 16093676 [PubMed - indexed for MEDLINE]Related citations

Characterization of pre-insertion loci of de novo L1 insertions.

Gasior SL, Preston G, Hedges DJ, Gilbert N, Moran JV, Deininger PL.

Gene. 2007 Apr 1;390(1-2):190-8. Epub 2006 Sep 12.PMID: 17067767 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Genomic rearrangements by LINE-1 insertion-mediated deletion in the human and chimpanzee lineages.

Han K, Sen SK, Wang J, Callinan PA, Lee J, Cordaux R, Liang P, Batzer MA.

Nucleic Acids Res. 2005 Jul 20;33(13):4040-52. Print 2005.PMID: 16034026 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Endonuclease-independent insertion provides an alternative pathway for L1 retrotransposition in the human genome.

Sen SK, Huang CT, Han K, Batzer MA.

Nucleic Acids Res. 2007;35(11):3741-51. Epub 2007 May 21.PMID: 17517773 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Different integration site structures between L1 protein-mediated retrotransposition in cis and retrotransposition in trans.

Kojima KK.

Mob DNA. 2010 Jul 8;1(1):17.PMID: 20615209 [PubMed - in process]Free PMC ArticleFree textRelated citations

An alternative pathway for Alu retrotransposition suggests a role in DNA double-strand break repair.

Srikanta D, Sen SK, Huang CT, Conlin EM, Rhodes RM, Batzer MA.

Genomics. 2009 Mar;93(3):205-12. Epub 2008 Nov 11.PMID: 18951971 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Alu retrotransposition-mediated deletion.

Callinan PA, Wang J, Herke SW, Garber RK, Liang P, Batzer MA.

J Mol Biol. 2005 May 13;348(4):791-800.PMID: 15843013 [PubMed - indexed for MEDLINE]Related citations

Endonuclease-independent LINE-1 retrotransposition at mammalian telomeres.

Morrish TA, Garcia-Perez JL, Stamato TD, Taccioli GE, Sekiguchi J, Moran JV.

Nature. 2007 Mar 8;446(7132):208-12.PMID: 17344853 [PubMed - indexed for MEDLINE]Related citations

Analysis of 5' junctions of human LINE-1 and Alu retrotransposons suggests an alternative model for 5'-end attachment requiring microhomology-mediated end-joining.

Zingler N, Willhoeft U, Brose HP, Schoder V, Jahns T, Hanschmann KM, Morrish TA, Löwer J, Schumann GG.

Genome Res. 2005 Jun;15(6):780-9.PMID: 15930490 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

A systematic analysis of LINE-1 endonuclease-dependent retrotranspositional events causing human genetic disease.

Chen JM, Stenson PD, Cooper DN, Férec C.

Hum Genet. 2005 Sep;117(5):411-27. Epub 2005 Jun 28. Review.PMID: 15983781 [PubMed - indexed for MEDLINE]Related citations

IS1630 of Mycoplasma fermentans, a novel IS30-type insertion element that targets and duplicates inverted repeats of variable length and sequence during insertion.

Calcutt MJ, Lavrrar JL, Wise KS.

J Bacteriol. 1999 Dec;181(24):7597-607.PMID: 10601219 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

L1 recombination-associated deletions generate human genomic variation.

Han K, Lee J, Meyer TJ, Remedios P, Goodwin L, Batzer MA.

Proc Natl Acad Sci U S A. 2008 Dec 9;105(49):19366-71. Epub 2008 Nov 26.PMID: 19036926 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Identifying related L1 retrotransposons by analyzing 3' transduced sequences.

Szak ST, Pickeral OK, Landsman D, Boeke JD.

Genome Biol. 2003;4(5):R30. Epub 2003 Apr 16.PMID: 12734010 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Genomic deletions and precise removal of transposable elements mediated by short identical DNA segments in primates.

van de Lagemaat LN, Gagnier L, Medstrand P, Mager DL.

Genome Res. 2005 Sep;15(9):1243-9.PMID: 16140992 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Identification and characterization of novel polymorphic LINE-1 insertions through comparison of two human genome sequence assemblies.

Konkel MK, Wang J, Liang P, Batzer MA.

Gene. 2007 Apr 1;390(1-2):28-38. Epub 2006 Aug 30.PMID: 17034961 [PubMed - indexed for MEDLINE]Related citations