Warning: The NCBI web site requires JavaScript to function. more...
Cooperativity within proximal phosphorylation sites is revealed from large-scale proteomics data.
Schweiger R, Linial M.
Biol Direct. 2010 Jan 26;5:6.
Related citations
VEMS 3.0: algorithms and computational tools for tandem mass spectrometry based identification of post-translational modifications in proteins.
Matthiesen R, Trelle MB, Højrup P, Bunkenborg J, Jensen ON.
J Proteome Res. 2005 Nov-Dec;4(6):2338-47.
An overview of the qualitative analysis of phosphoproteins by mass spectrometry.
Gafken PR.
Methods Mol Biol. 2009;527:159-72, ix. Review.
The phosphoproteome of bloodstream form Trypanosoma brucei, causative agent of African sleeping sickness.
Nett IR, Martin DM, Miranda-Saavedra D, Lamont D, Barber JD, Mehlert A, Ferguson MA.
Mol Cell Proteomics. 2009 Jul;8(7):1527-38. Epub 2009 Apr 4.
Functional analysis of proteins and protein species using shotgun proteomics and linear mathematics.
Hoehenwarter W, Chen Y, Recuenco-Munoz L, Wienkoop S, Weckwerth W.
Amino Acids. 2011 Jul;41(2):329-41. Epub 2010 Jul 3. Review.
Confident phosphorylation site localization using the Mascot Delta Score.
Savitski MM, Lemeer S, Boesche M, Lang M, Mathieson T, Bantscheff M, Kuster B.
Mol Cell Proteomics. 2011 Feb;10(2):M110.003830. Epub 2010 Nov 6.
Phosphoproteome analysis of HeLa cells using stable isotope labeling with amino acids in cell culture (SILAC).
Amanchy R, Kalume DE, Iwahori A, Zhong J, Pandey A.
J Proteome Res. 2005 Sep-Oct;4(5):1661-71.
In silico analysis of phosphoproteome data suggests a rich-get-richer process of phosphosite accumulation over evolution.
Yachie N, Saito R, Sugahara J, Tomita M, Ishihama Y.
Mol Cell Proteomics. 2009 May;8(5):1061-71. Epub 2009 Jan 9.
Proteomics approaches to understand protein phosphorylation in pathway modulation.
Schulze WX.
Curr Opin Plant Biol. 2010 Jun;13(3):280-87. Epub 2010 Jan 22. Review.
Large-scale discovery and characterization of protein regulatory motifs in eukaryotes.
Lieber DS, Elemento O, Tavazoie S.
PLoS One. 2010 Dec 29;5(12):e14444.
The serine/threonine/tyrosine phosphoproteome of the model bacterium Bacillus subtilis.
Macek B, Mijakovic I, Olsen JV, Gnad F, Kumar C, Jensen PR, Mann M.
Mol Cell Proteomics. 2007 Apr;6(4):697-707. Epub 2007 Jan 10.
ProteoConnections: a bioinformatics platform to facilitate proteome and phosphoproteome analyses.
Courcelles M, Lemieux S, Voisin L, Meloche S, Thibault P.
Proteomics. 2011 Jul;11(13):2654-71. doi: 10.1002/pmic.201000776. Epub 2011 May 31.
Plant phosphoproteomics: a long road ahead.
Kersten B, Agrawal GK, Iwahashi H, Rakwal R.
Proteomics. 2006 Oct;6(20):5517-28. Review.
An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells.
Bodenmiller B, Mueller LN, Pedrioli PG, Pflieger D, Jünger MA, Eng JK, Aebersold R, Tao WA.
Mol Biosyst. 2007 Apr;3(4):275-86. Epub 2007 Feb 19.
Advances in the analysis of protein phosphorylation.
Paradela A, Albar JP.
J Proteome Res. 2008 May;7(5):1809-18. Epub 2008 Mar 8. Review.
Modification-specific proteomics in plant biology.
Ytterberg AJ, Jensen ON.
J Proteomics. 2010 Oct 10;73(11):2249-66. Epub 2010 Jun 10. Review.
Challenges and strategies for targeted phosphorylation site identification and quantification using mass spectrometry analysis.
Blackburn K, Goshe MB.
Brief Funct Genomic Proteomic. 2009 Mar;8(2):90-103. Epub 2008 Dec 24. Review.
Identification and analysis of occludin phosphosites: a combined mass spectrometry and bioinformatics approach.
Sundstrom JM, Tash BR, Murakami T, Flanagan JM, Bewley MC, Stanley BA, Gonsar KB, Antonetti DA.
J Proteome Res. 2009 Feb;8(2):808-17.
Phosphoproteomics toolbox: computational biology, protein chemistry and mass spectrometry.
Hjerrild M, Gammeltoft S.
FEBS Lett. 2006 Sep 4;580(20):4764-70. Epub 2006 Aug 4.
Phosphoproteomics by mass spectrometry and classical protein chemistry approaches.
Salih E.
Mass Spectrom Rev. 2005 Nov-Dec;24(6):828-46. Review.
Filter your results:
Your browsing activity is empty.
Activity recording is turned off.
Turn recording back on