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    Results: 1 to 20 of 105

    1.

    Integrating phenotype ontologies across multiple species.

    Mungall CJ, Gkoutos GV, Smith CL, Haendel MA, Lewis SE, Ashburner M.

    Genome Biol. 2010 Jan 8;11(1):R2.

    PMID:
    20064205
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Evolutionary characters, phenotypes and ontologies: curating data from the systematic biology literature.

    Dahdul WM, Balhoff JP, Engeman J, Grande T, Hilton EJ, Kothari C, Lapp H, Lundberg JG, Midford PE, Vision TJ, Westerfield M, Mabee PM.

    PLoS One. 2010 May 20;5(5):e10708.

    PMID:
    20505755
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    PhenoGO: an integrated resource for the multiscale mining of clinical and biological data.

    Sam LT, Mendonça EA, Li J, Blake J, Friedman C, Lussier YA.

    BMC Bioinformatics. 2009 Feb 5;10 Suppl 2:S8.

    PMID:
    19208196
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    Ontological Discovery Environment: a system for integrating gene-phenotype associations.

    Baker EJ, Jay JJ, Philip VM, Zhang Y, Li Z, Kirova R, Langston MA, Chesler EJ.

    Genomics. 2009 Dec;94(6):377-87. Epub 2009 Sep 3.

    PMID:
    19733230
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    A Chado case study: an ontology-based modular schema for representing genome-associated biological information.

    Mungall CJ, Emmert DB; FlyBase Consortium.

    Bioinformatics. 2007 Jul 1;23(13):i337-46.

    PMID:
    17646315
    [PubMed - indexed for MEDLINE]
    Free Article
    6.

    Searching the Mouse Genome Informatics (MGI) resources for information on mouse biology from genotype to phenotype.

    Shaw DR.

    Curr Protoc Bioinformatics. 2009 Mar;Chapter 1:Unit1.7.

    PMID:
    19274630
    [PubMed - indexed for MEDLINE]
    7.

    Practical application of ontologies to annotate and analyse large scale raw mouse phenotype data.

    Beck T, Morgan H, Blake A, Wells S, Hancock JM, Mallon AM.

    BMC Bioinformatics. 2009 May 6;10 Suppl 5:S2.

    PMID:
    19426459
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Representing default knowledge in biomedical ontologies: application to the integration of anatomy and phenotype ontologies.

    Hoehndorf R, Loebe F, Kelso J, Herre H.

    BMC Bioinformatics. 2007 Oct 9;8:377.

    PMID:
    17925014
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    Animal trait ontology: The importance and usefulness of a unified trait vocabulary for animal species.

    Hughes LM, Bao J, Hu ZL, Honavar V, Reecy JM.

    J Anim Sci. 2008 Jun;86(6):1485-91. Epub 2008 Feb 13.

    PMID:
    18272850
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    Searching the Mouse Genome Informatics (MGI) resources for information on mouse biology from genotype to phenotype.

    Shaw D.

    Curr Protoc Bioinformatics. 2004 May;Chapter 1:Unit 1.7.

    PMID:
    18428715
    [PubMed - indexed for MEDLINE]
    11.

    The mouse genome database (MGD): new features facilitating a model system.

    Eppig JT, Blake JA, Bult CJ, Kadin JA, Richardson JE; Mouse Genome Database Group.

    Nucleic Acids Res. 2007 Jan;35(Database issue):D630-7. Epub 2006 Nov 29.

    PMID:
    17135206
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Entity/quality-based logical definitions for the human skeletal phenome using PATO.

    Gkoutos GV, Mungall C, Dolken S, Ashburner M, Lewis S, Hancock J, Schofield P, Kohler S, Robinson PN.

    Conf Proc IEEE Eng Med Biol Soc. 2009;2009:7069-72.

    PMID:
    19964203
    [PubMed - indexed for MEDLINE]
    13.

    GWAS analyzer: integrating genotype, phenotype and public annotation data for genome-wide association study analysis.

    Fong C, Ko DC, Wasnick M, Radey M, Miller SI, Brittnacher M.

    Bioinformatics. 2010 Feb 15;26(4):560-4. Epub 2010 Jan 6.

    PMID:
    20053839
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    The Mammalian Phenotype Ontology as a tool for annotating, analyzing and comparing phenotypic information.

    Smith CL, Goldsmith CA, Eppig JT.

    Genome Biol. 2005;6(1):R7. Epub 2004 Dec 15.

    PMID:
    15642099
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    A gross anatomy ontology for hymenoptera.

    Yoder MJ, Mikó I, Seltmann KC, Bertone MA, Deans AR.

    PLoS One. 2010 Dec 29;5(12):e15991.

    PMID:
    21209921
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Phenex: ontological annotation of phenotypic diversity.

    Balhoff JP, Dahdul WM, Kothari CR, Lapp H, Lundberg JG, Mabee P, Midford PE, Westerfield M, Vision TJ.

    PLoS One. 2010 May 5;5(5):e10500.

    PMID:
    20463926
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    Building mouse phenotype ontologies.

    Gkoutos GV, Green EC, Mallon AM, Hancock JM, Davidson D.

    Pac Symp Biocomput. 2004:178-89.

    PMID:
    14992502
    [PubMed - indexed for MEDLINE]
    Free Article
    18.

    Ontology annotation: mapping genomic regions to biological function.

    Thomas PD, Mi H, Lewis S.

    Curr Opin Chem Biol. 2007 Feb;11(1):4-11. Epub 2007 Jan 5. Review.

    PMID:
    17208035
    [PubMed - indexed for MEDLINE]
    19.

    Mapping the genetic architecture of complex traits in experimental populations.

    Yang J, Zhu J, Williams RW.

    Bioinformatics. 2007 Jun 15;23(12):1527-36. Epub 2007 Apr 25.

    PMID:
    17459962
    [PubMed - indexed for MEDLINE]
    Free Article
    20.

    Providing visualisation support for the analysis of anatomy ontology data.

    Dadzie AS, Burger A.

    BMC Bioinformatics. 2005 Mar 24;6:74.

    PMID:
    15790390
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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