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    Results: 1 to 20 of 108

    1.

    BioGPS: an extensible and customizable portal for querying and organizing gene annotation resources.

    Wu C, Orozco C, Boyer J, Leglise M, Goodale J, Batalov S, Hodge CL, Haase J, Janes J, Huss JW 3rd, Su AI.

    Genome Biol. 2009;10(11):R130. Epub 2009 Nov 17.

    PMID:
    19919682
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    DAVID Knowledgebase: a gene-centered database integrating heterogeneous gene annotation resources to facilitate high-throughput gene functional analysis.

    Sherman BT, Huang da W, Tan Q, Guo Y, Bour S, Liu D, Stephens R, Baseler MW, Lane HC, Lempicki RA.

    BMC Bioinformatics. 2007 Nov 2;8:426.

    PMID:
    17980028
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    The Gene Wiki: community intelligence applied to human gene annotation.

    Huss JW 3rd, Lindenbaum P, Martone M, Roberts D, Pizarro A, Valafar F, Hogenesch JB, Su AI.

    Nucleic Acids Res. 2010 Jan;38(Database issue):D633-9. Epub 2009 Sep 15.

    PMID:
    19755503
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    GeneKeyDB: a lightweight, gene-centric, relational database to support data mining environments.

    Kirov SA, Peng X, Baker E, Schmoyer D, Zhang B, Snoddy J.

    BMC Bioinformatics. 2005 Mar 24;6:72.

    PMID:
    15790402
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    BioBuilder as a database development and functional annotation platform for proteins.

    Navarro JD, Talreja N, Peri S, Vrushabendra BM, Rashmi BP, Padma N, Surendranath V, Jonnalagadda CK, Kousthub PS, Deshpande N, Shanker K, Pandey A.

    BMC Bioinformatics. 2004 Apr 20;5:43.

    PMID:
    15099404
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    GeneCruiser: a web service for the annotation of microarray data.

    Liefeld T, Reich M, Gould J, Zhang P, Tamayo P, Mesirov JP.

    Bioinformatics. 2005 Sep 15;21(18):3681-2. Epub 2005 Jul 19.

    PMID:
    16030072
    [PubMed - indexed for MEDLINE]
    Free Article
    7.

    GARSA: genomic analysis resources for sequence annotation.

    Dávila AM, Lorenzini DM, Mendes PN, Satake TS, Sousa GR, Campos LM, Mazzoni CJ, Wagner G, Pires PF, Grisard EC, Cavalcanti MC, Campos ML.

    Bioinformatics. 2005 Dec 1;21(23):4302-3. Epub 2005 Oct 6.

    PMID:
    16210424
    [PubMed - indexed for MEDLINE]
    Free Article
    8.

    GeneNotes--a novel information management software for biologists.

    Hong P, Wong WH.

    BMC Bioinformatics. 2005 Feb 1;6:20.

    PMID:
    15686593
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    MILANO--custom annotation of microarray results using automatic literature searches.

    Rubinstein R, Simon I.

    BMC Bioinformatics. 2005 Jan 20;6:12.

    PMID:
    15661078
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    The Aspergillus Genome Database, a curated comparative genomics resource for gene, protein and sequence information for the Aspergillus research community.

    Arnaud MB, Chibucos MC, Costanzo MC, Crabtree J, Inglis DO, Lotia A, Orvis J, Shah P, Skrzypek MS, Binkley G, Miyasato SR, Wortman JR, Sherlock G.

    Nucleic Acids Res. 2010 Jan;38(Database issue):D420-7. Epub 2009 Sep 22.

    PMID:
    19773420
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists.

    Huang da W, Sherman BT, Tan Q, Kir J, Liu D, Bryant D, Guo Y, Stephens R, Baseler MW, Lane HC, Lempicki RA.

    Nucleic Acids Res. 2007 Jul;35(Web Server issue):W169-75. Epub 2007 Jun 18.

    PMID:
    17576678
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Atlas - a data warehouse for integrative bioinformatics.

    Shah SP, Huang Y, Xu T, Yuen MM, Ling J, Ouellette BF.

    BMC Bioinformatics. 2005 Feb 21;6:34.

    PMID:
    15723693
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    Inherited disorder phenotypes: controlled annotation and statistical analysis for knowledge mining from gene lists.

    Masseroli M, Galati O, Manzotti M, Gibert K, Pinciroli F.

    BMC Bioinformatics. 2005 Dec 1;6 Suppl 4:S18.

    PMID:
    16351744
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research.

    Conesa A, Götz S, García-Gómez JM, Terol J, Talón M, Robles M.

    Bioinformatics. 2005 Sep 15;21(18):3674-6. Epub 2005 Aug 4.

    PMID:
    16081474
    [PubMed - indexed for MEDLINE]
    Free Article
    15.

    The Gene Ontology in 2010: extensions and refinements.

    Gene Ontology Consortium.

    Nucleic Acids Res. 2010 Jan;38(Database issue):D331-5. Epub 2009 Nov 17.

    PMID:
    19920128
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    GeneSeer: a sage for gene names and genomic resources.

    Olson AJ, Tully T, Sachidanandam R.

    BMC Genomics. 2005 Sep 21;6:134.

    PMID:
    16176584
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    SoyBase, the USDA-ARS soybean genetics and genomics database.

    Grant D, Nelson RT, Cannon SB, Shoemaker RC.

    Nucleic Acids Res. 2010 Jan;38(Database issue):D843-6. Epub 2009 Dec 14.

    PMID:
    20008513
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    18.

    MODBASE, a database of annotated comparative protein structure models, and associated resources.

    Pieper U, Eswar N, Braberg H, Madhusudhan MS, Davis FP, Stuart AC, Mirkovic N, Rossi A, Marti-Renom MA, Fiser A, Webb B, Greenblatt D, Huang CC, Ferrin TE, Sali A.

    Nucleic Acids Res. 2004 Jan 1;32(Database issue):D217-22.

    PMID:
    14681398
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    CARGO: a web portal to integrate customized biological information.

    Cases I, Pisano DG, Andres E, Carro A, Fernández JM, Gómez-López G, Rodriguez JM, Vera JF, Valencia A, Rojas AM.

    Nucleic Acids Res. 2007 Jul;35(Web Server issue):W16-20. Epub 2007 May 5.

    PMID:
    17483515
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    GenColors: accelerated comparative analysis and annotation of prokaryotic genomes at various stages of completeness.

    Romualdi A, Siddiqui R, Glöckner G, Lehmann R, Sühnel J.

    Bioinformatics. 2005 Sep 15;21(18):3669-71. Epub 2005 Aug 2.

    PMID:
    16076887
    [PubMed - indexed for MEDLINE]
    Free Article

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