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    Results: 1 to 20 of 100

    1.

    Differential binding and co-binding pattern of FOXA1 and FOXA3 and their relation to H3K4me3 in HepG2 cells revealed by ChIP-seq.

    Motallebipour M, Ameur A, Reddy Bysani MS, Patra K, Wallerman O, Mangion J, Barker MA, McKernan KJ, Komorowski J, Wadelius C.

    Genome Biol. 2009;10(11):R129. Epub 2009 Nov 17.PMID: 19919681 [PubMed - in process]Related articles

    2.

    Protein or amino acid deprivation differentially regulates the hepatic forkhead box protein A (FOXA) genes through an activating transcription factor-4-independent pathway.

    Su N, Thiaville MM, Awad K, Gjymishka A, Brant JO, Yang TP, Kilberg MS.

    Hepatology. 2009 Jul;50(1):282-90.PMID: 19415718 [PubMed - indexed for MEDLINE]Related articles

    3.

    Genome-wide relationship between histone H3 lysine 4 mono- and tri-methylation and transcription factor binding.

    Robertson AG, Bilenky M, Tam A, Zhao Y, Zeng T, Thiessen N, Cezard T, Fejes AP, Wederell ED, Cullum R, Euskirchen G, Krzywinski M, Birol I, Snyder M, Hoodless PA, Hirst M, Marra MA, Jones SJ.

    Genome Res. 2008 Dec;18(12):1906-17. Epub 2008 Sep 11.PMID: 18787082 [PubMed - indexed for MEDLINE]Related articlesFree article

    4.

    Foxa1 and Foxa2 interact with the androgen receptor to regulate prostate and epididymal genes differentially.

    Yu X, Gupta A, Wang Y, Suzuki K, Mirosevich J, Orgebin-Crist MC, Matusik RJ.

    Ann N Y Acad Sci. 2005 Dec;1061:77-93.PMID: 16467259 [PubMed - indexed for MEDLINE]Related articles

    5.

    Association between hepatocyte nuclear factor 6 (HNF-6) and FoxA2 DNA binding domains stimulates FoxA2 transcriptional activity but inhibits HNF-6 DNA binding.

    Rausa FM, Tan Y, Costa RH.

    Mol Cell Biol. 2003 Jan;23(2):437-49.PMID: 12509444 [PubMed - indexed for MEDLINE]Related articlesFree article

    6.

    Genome-wide identification of in vivo protein-DNA binding sites from ChIP-Seq data.

    Jothi R, Cuddapah S, Barski A, Cui K, Zhao K.

    Nucleic Acids Res. 2008 Sep;36(16):5221-31. Epub 2008 Aug 6.PMID: 18684996 [PubMed - indexed for MEDLINE]Related articlesFree article

    7.

    Molecular interactions between HNF4a, FOXA2 and GABP identified at regulatory DNA elements through ChIP-sequencing.

    Wallerman O, Motallebipour M, Enroth S, Patra K, Bysani MS, Komorowski J, Wadelius C.

    Nucleic Acids Res. 2009 Dec;37(22):7498-508. Epub .PMID: 19822575 [PubMed - indexed for MEDLINE]Related articlesFree article

    8.

    Foxa3 (HNF-3gamma) binds to and activates the rat proglucagon gene promoter but is not essential for proglucagon gene expression.

    Liu Y, Shen W, Brubaker PL, Kaestner KH, Drucker DJ.

    Biochem J. 2002 Sep 1;366(Pt 2):633-41.PMID: 12000309 [PubMed - indexed for MEDLINE]Related articlesFree article

    9.

    Global analysis of in vivo Foxa2-binding sites in mouse adult liver using massively parallel sequencing.

    Wederell ED, Bilenky M, Cullum R, Thiessen N, Dagpinar M, Delaney A, Varhol R, Zhao Y, Zeng T, Bernier B, Ingham M, Hirst M, Robertson G, Marra MA, Jones S, Hoodless PA.

    Nucleic Acids Res. 2008 Aug;36(14):4549-64. Epub 2008 Jul 8.PMID: 18611952 [PubMed - indexed for MEDLINE]Related articlesFree article

    10.

    Physical and functional interactions between homeodomain NKX2.1 and winged helix/forkhead FOXA1 in lung epithelial cells.

    Minoo P, Hu L, Xing Y, Zhu NL, Chen H, Li M, Borok Z, Li C.

    Mol Cell Biol. 2007 Mar;27(6):2155-65. Epub 2007 Jan 12.PMID: 17220277 [PubMed - indexed for MEDLINE]Related articlesFree article

    11.

    Foxa1 and Foxa2 function both upstream of and cooperatively with Lmx1a and Lmx1b in a feedforward loop promoting mesodiencephalic dopaminergic neuron development.

    Lin W, Metzakopian E, Mavromatakis YE, Gao N, Balaskas N, Sasaki H, Briscoe J, Whitsett JA, Goulding M, Kaestner KH, Ang SL.

    Dev Biol. 2009 Sep 15;333(2):386-96. Epub 2009 Jul 14.PMID: 19607821 [PubMed - indexed for MEDLINE]Related articles

    12.

    Foxa3 (hepatocyte nuclear factor 3gamma ) is required for the regulation of hepatic GLUT2 expression and the maintenance of glucose homeostasis during a prolonged fast.

    Shen W, Scearce LM, Brestelli JE, Sund NJ, Kaestner KH.

    J Biol Chem. 2001 Nov 16;276(46):42812-7. Epub 2001 Sep 6.PMID: 11546810 [PubMed - indexed for MEDLINE]Related articlesFree article

    13.

    Mapping accessible chromatin regions using Sono-Seq.

    Auerbach RK, Euskirchen G, Rozowsky J, Lamarre-Vincent N, Moqtaderi Z, Lefrançois P, Struhl K, Gerstein M, Snyder M.

    Proc Natl Acad Sci U S A. 2009 Sep 1;106(35):14926-31. Epub 2009 Aug 18.PMID: 19706456 [PubMed - indexed for MEDLINE]Related articlesFree article

    14.

    Upstream stimulatory factor 2, a novel FoxA1-interacting protein, is involved in prostate-specific gene expression.

    Sun Q, Yu X, Degraff DJ, Matusik RJ.

    Mol Endocrinol. 2009 Dec;23(12):2038-47. Epub 2009 Oct 21.PMID: 19846536 [PubMed - indexed for MEDLINE]Related articles

    15.

    An effective approach for identification of in vivo protein-DNA binding sites from paired-end ChIP-Seq data.

    Wang C, Xu J, Zhang D, Wilson ZA, Zhang D.

    BMC Bioinformatics. 2010 Feb 9;11:81.PMID: 20144209 [PubMed - in process]Related articlesFree article

    16.

    Dynamic regulation of Pdx1 enhancers by Foxa1 and Foxa2 is essential for pancreas development.

    Gao N, LeLay J, Vatamaniuk MZ, Rieck S, Friedman JR, Kaestner KH.

    Genes Dev. 2008 Dec 15;22(24):3435-48.PMID: 19141476 [PubMed - indexed for MEDLINE]Related articlesFree article

    17.

    Genome-wide profiling of histone h3 lysine 4 and lysine 27 trimethylation reveals an epigenetic signature in prostate carcinogenesis.

    Ke XS, Qu Y, Rostad K, Li WC, Lin B, Halvorsen OJ, Haukaas SA, Jonassen I, Petersen K, Goldfinger N, Rotter V, Akslen LA, Oyan AM, Kalland KH.

    PLoS One. 2009;4(3):e4687. Epub 2009 Mar 5.PMID: 19262738 [PubMed - indexed for MEDLINE]Related articlesFree article

    18.

    Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana.

    Zhang X, Bernatavichute YV, Cokus S, Pellegrini M, Jacobsen SE.

    Genome Biol. 2009;10(6):R62. Epub 2009 Jun 9.PMID: 19508735 [PubMed - indexed for MEDLINE]Related articlesFree article

    19.

    Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing.

    Robertson G, Hirst M, Bainbridge M, Bilenky M, Zhao Y, Zeng T, Euskirchen G, Bernier B, Varhol R, Delaney A, Thiessen N, Griffith OL, He A, Marra M, Snyder M, Jones S.

    Nat Methods. 2007 Aug;4(8):651-7. Epub 2007 Jun 11.PMID: 17558387 [PubMed - indexed for MEDLINE]Related articles

    20.

    The role of forkhead box A2 to restrict androgen-regulated gene expression of lipocalin 5 in the mouse epididymis.

    Yu X, Suzuki K, Wang Y, Gupta A, Jin R, Orgebin-Crist MC, Matusik R.

    Mol Endocrinol. 2006 Oct;20(10):2418-31. Epub 2006 Jun 1.PMID: 16740652 [PubMed - indexed for MEDLINE]Related articlesFree article

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