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    Results: 1 to 20 of 49

    1.

    iTriplet, a rule-based nucleic acid sequence motif finder.

    Ho ES, Jakubowski CD, Gunderson SI.

    Algorithms Mol Biol. 2009 Oct 29;4:14.PMID: 19874606 [PubMed]Related articlesFree article

    2.

    DISCOVER: a feature-based discriminative method for motif search in complex genomes.

    Fu W, Ray P, Xing EP.

    Bioinformatics. 2009 Jun 15;25(12):i321-9.PMID: 19478006 [PubMed - indexed for MEDLINE]Related articlesFree article

    3.

    A combinatorial optimization approach for diverse motif finding applications.

    Zaslavsky E, Singh M.

    Algorithms Mol Biol. 2006 Aug 17;1:13.PMID: 16916460 [PubMed]Related articlesFree article

    4.

    M are better than one: an ensemble-based motif finder and its application to regulatory element prediction.

    Yanover C, Singh M, Zaslavsky E.

    Bioinformatics. 2009 Apr 1;25(7):868-74. Epub 2009 Feb 17.PMID: 19223448 [PubMed - indexed for MEDLINE]Related articles

    5.

    [Applications of the motif-programmed proteins in medical area]

    Shiba K.

    Yakugaku Zasshi. 2009 Nov;129(11):1295-302. Review. Japanese. PMID: 19881200 [PubMed - indexed for MEDLINE]Related articlesFree article

    6.

    RegAnalyst: a web interface for the analysis of regulatory motifs, networks and pathways.

    Sharma D, Mohanty D, Surolia A.

    Nucleic Acids Res. 2009 Jul 1;37(Web Server issue):W193-201. Epub 2009 May 21.PMID: 19465400 [PubMed - indexed for MEDLINE]Related articlesFree article

    7.

    FISim: a new similarity measure between transcription factor binding sites based on the fuzzy integral.

    Garcia F, Lopez FJ, Cano C, Blanco A.

    BMC Bioinformatics. 2009 Jul 20;10:224.PMID: 19615102 [PubMed - indexed for MEDLINE]Related articlesFree article

    8.

    High-throughput sequencing of microdissected chromosomal regions.

    Weise A, Timmermann B, Grabherr M, Werber M, Heyn P, Kosyakova N, Liehr T, Neitzel H, Konrat K, Bommer C, Dietrich C, Rajab A, Reinhardt R, Mundlos S, Lindner TH, Hoffmann K.

    Eur J Hum Genet. 2009 Nov 4. [Epub ahead of print]PMID: 19888302 [PubMed - as supplied by publisher]Related articles

    9.

    Voting algorithms for the motif finding problem.

    Liu X, Ma B, Wang L.

    Comput Syst Bioinformatics Conf. 2008;7:37-47.PMID: 19642267 [PubMed - indexed for MEDLINE]Related articles

    10.

    Exhaustive Enumeration of Kinetic Model Topologies for the Analysis of Time-Resolved RNA Folding.

    Martin JS, Simmons K, Laederach A.

    Algorithms. 2009 Mar 1;2(1):200-214.PMID: 19865589 [PubMed]Related articlesFree article

    11.

    Efficient exact motif discovery.

    Marschall T, Rahmann S.

    Bioinformatics. 2009 Jun 15;25(12):i356-64.PMID: 19478010 [PubMed - indexed for MEDLINE]Related articlesFree article

    12.

    Mining, compressing and classifying with extensible motifs.

    Apostolico A, Comin M, Parida L.

    Algorithms Mol Biol. 2006 Mar 23;1(1):4.PMID: 16722593 [PubMed]Related articlesFree article

    13.

    PIDA:A new algorithm for pattern identification.

    Putonti C, Pettitt B, Reid J, Fofanov Y.

    Online J Bioinform. 2007 Jan 1;8(1):30-40.PMID: 19834570 [PubMed]Related articlesFree article

    14.

    A variable-sized sliding-window approach for genetic association studies via principal component analysis.

    Tang R, Feng T, Sha Q, Zhang S.

    Ann Hum Genet. 2009 Nov;73(Pt 6):631-7. Epub 2009 Sep 7.PMID: 19735491 [PubMed - indexed for MEDLINE]Related articlesFree article

    15.

    Automatic segmentation of long-term ECG signals corrupted with broadband noise based on sample entropy.

    Micó P, Mora M, Cuesta-Frau D, Aboy M.

    Comput Methods Programs Biomed. 2009 Oct 20. [Epub ahead of print]PMID: 19850373 [PubMed - as supplied by publisher]Related articles

    16.

    Internal coarse-graining of molecular systems.

    Feret J, Danos V, Krivine J, Harmer R, Fontana W.

    Proc Natl Acad Sci U S A. 2009 Apr 21;106(16):6453-8. Epub 2009 Apr 3.PMID: 19346467 [PubMed - indexed for MEDLINE]Related articlesFree article

    17.

    Composite likelihood estimation of demographic parameters.

    Garrigan D.

    BMC Genet. 2009 Nov 12;10:72.PMID: 19909534 [PubMed - indexed for MEDLINE]Related articlesFree article

    18.

    Rapid high-throughput analysis of DNaseI hypersensitive sites using a modified Multiplex Ligation-dependent Probe Amplification approach.

    Ohnesorg T, Eggers S, Leonhard WN, Sinclair AH, White SJ.

    BMC Genomics. 2009 Sep 4;10:412.PMID: 19728890 [PubMed - indexed for MEDLINE]Related articlesFree article

    19.

    Heterogeneity in DNA Multiple Alignments: Modeling, Inference, and Applications in Motif Finding.

    Chen G, Zhou Q.

    Biometrics. 2009 Nov 30. [Epub ahead of print]PMID: 19995355 [PubMed - as supplied by publisher]Related articles

    20.

    BING: Biomedical informatics pipeline for Next Generation Sequencing.

    Kriseman J, Busick C, Szelinger S, Dinu V.

    J Biomed Inform. 2009 Nov 28. [Epub ahead of print]PMID: 19925883 [PubMed - as supplied by publisher]Related articles

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