Warning: The NCBI web site requires JavaScript to function. more...
Whole-genome resequencing of Escherichia coli K-12 MG1655 undergoing short-term laboratory evolution in lactate minimal media reveals flexible selection of adaptive mutations.
Conrad TM, Joyce AR, Applebee MK, Barrett CL, Xie B, Gao Y, Palsson BØ.
Genome Biol. 2009;10(10):R118. Epub 2009 Oct 22.
Related citations
Adaptive evolution of Escherichia coli K-12 MG1655 during growth on a Nonnative carbon source, L-1,2-propanediol.
Lee DH, Palsson BØ.
Appl Environ Microbiol. 2010 Jul;76(13):4158-68. Epub 2010 Apr 30. Erratum in: Appl Environ Microbiol. 2010 Sep;76(18):6327.
Comparative genome sequencing of Escherichia coli allows observation of bacterial evolution on a laboratory timescale.
Herring CD, Raghunathan A, Honisch C, Patel T, Applebee MK, Joyce AR, Albert TJ, Blattner FR, van den Boom D, Cantor CR, Palsson BØ.
Nat Genet. 2006 Dec;38(12):1406-12. Epub 2006 Nov 5.
RNA polymerase mutants found through adaptive evolution reprogram Escherichia coli for optimal growth in minimal media.
Conrad TM, Frazier M, Joyce AR, Cho BK, Knight EM, Lewis NE, Landick R, Palsson BØ.
Proc Natl Acad Sci U S A. 2010 Nov 23;107(47):20500-5. Epub 2010 Nov 5.
Description and interpretation of adaptive evolution of Escherichia coli K-12 MG1655 by using a genome-scale in silico metabolic model.
Fong SS, Marciniak JY, Palsson BØ.
J Bacteriol. 2003 Nov;185(21):6400-8.
Transition from positive to neutral in mutation fixation along with continuing rising fitness in thermal adaptive evolution.
Kishimoto T, Iijima L, Tatsumi M, Ono N, Oyake A, Hashimoto T, Matsuo M, Okubo M, Suzuki S, Mori K, Kashiwagi A, Furusawa C, Ying BW, Yomo T.
PLoS Genet. 2010 Oct 21;6(10):e1001164.
The Escherichia coli K-12 "wild types" W3110 and MG1655 have an rph frameshift mutation that leads to pyrimidine starvation due to low pyrE expression levels.
Jensen KF.
J Bacteriol. 1993 Jun;175(11):3401-7.
Final Report on Carcinogens Background Document for Formaldehyde.
National Toxicology Program.
Rep Carcinog Backgr Doc. 2010 Jan;(10-5981):i-512.
Genome evolution and adaptation in a long-term experiment with Escherichia coli.
Barrick JE, Yu DS, Yoon SH, Jeong H, Oh TK, Schneider D, Lenski RE, Kim JF.
Nature. 2009 Oct 29;461(7268):1243-7. Epub 2009 Oct 18.
Parallel adaptive evolution cultures of Escherichia coli lead to convergent growth phenotypes with different gene expression states.
Fong SS, Joyce AR, Palsson BØ.
Genome Res. 2005 Oct;15(10):1365-72.
Adaptive mgl-regulatory mutations and genetic diversity evolving in glucose-limited Escherichia coli populations.
Notley-McRobb L, Ferenci T.
Environ Microbiol. 1999 Feb;1(1):33-43.
Scalable method to determine mutations that occur during adaptive evolution of Escherichia coli.
Raghunathan A, Palsson BO.
Biotechnol Lett. 2003 Mar;25(5):435-41.
Occurrence of leu+ revertants under starvation cultures in Escherichia coli is growth-dependent.
Jin J, Gao P, Mao Y.
BMC Genet. 2002 Apr 25;3:6.
Genome-wide hypermutation in a subpopulation of stationary-phase cells underlies recombination-dependent adaptive mutation.
Torkelson J, Harris RS, Lombardo MJ, Nagendran J, Thulin C, Rosenberg SM.
EMBO J. 1997 Jun 2;16(11):3303-11.
The molecular diversity of adaptive convergence.
Tenaillon O, Rodríguez-Verdugo A, Gaut RL, McDonald P, Bennett AF, Long AD, Gaut BS.
Science. 2012 Jan 27;335(6067):457-61.
Genetic basis of growth adaptation of Escherichia coli after deletion of pgi, a major metabolic gene.
Charusanti P, Conrad TM, Knight EM, Venkataraman K, Fong NL, Xie B, Gao Y, Palsson BØ.
PLoS Genet. 2010 Nov 4;6(11):e1001186.
High frequency of hotspot mutations in core genes of Escherichia coli due to short-term positive selection.
Chattopadhyay S, Weissman SJ, Minin VN, Russo TA, Dykhuizen DE, Sokurenko EV.
Proc Natl Acad Sci U S A. 2009 Jul 28;106(30):12412-7. Epub 2009 Jul 15.
Study of adaptive mutations in Salmonella typhimurium by using a super-repressing mutant of a trans regulatory gene purR.
Yang Z, Lu Z, Wang A.
Mutat Res. 2001 Dec 12;484(1-2):95-102.
Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12.
Ferenci T, Zhou Z, Betteridge T, Ren Y, Liu Y, Feng L, Reeves PR, Wang L.
J Bacteriol. 2009 Jun;191(12):4025-9. Epub 2009 Apr 17.
High-throughput mutation detection underlying adaptive evolution of Escherichia coli-K12.
Honisch C, Raghunathan A, Cantor CR, Palsson BØ, van den Boom D.
Genome Res. 2004 Dec;14(12):2495-502.
Filter your results:
Your browsing activity is empty.
Activity recording is turned off.
Turn recording back on