PubMed

Open access to sequence: browsing the Pichia pastoris genome.

Mattanovich D, Callewaert N, Rouzé P, Lin YC, Graf A, Redl A, Tiels P, Gasser B, De Schutter K.

Microb Cell Fact. 2009 Oct 16;8:53.PMID: 19835590 [PubMed - indexed for MEDLINE]Related articlesFree article

Genome sequence of the recombinant protein production host Pichia pastoris.

De Schutter K, Lin YC, Tiels P, Van Hecke A, Glinka S, Weber-Lehmann J, Rouzé P, Van de Peer Y, Callewaert N.

Nat Biotechnol. 2009 Jun;27(6):561-6. Epub 2009 May 24.PMID: 19465926 [PubMed - indexed for MEDLINE]Related articles

Genome, secretome and glucose transport highlight unique features of the protein production host Pichia pastoris.

Mattanovich D, Graf A, Stadlmann J, Dragosits M, Redl A, Maurer M, Kleinheinz M, Sauer M, Altmann F, Gasser B.

Microb Cell Fact. 2009 Jun 2;8:29.PMID: 19490607 [PubMed - in process]Related articlesFree article

Novel insights into the unfolded protein response using Pichia pastoris specific DNA microarrays.

Graf A, Gasser B, Dragosits M, Sauer M, Leparc GG, Tüchler T, Kreil DP, Mattanovich D.

BMC Genomics. 2008 Aug 19;9:390.PMID: 18713468 [PubMed - indexed for MEDLINE]Related articlesFree article

Fungal BLAST and Model Organism BLASTP Best Hits: new comparison resources at the Saccharomyces Genome Database (SGD).

Balakrishnan R, Christie KR, Costanzo MC, Dolinski K, Dwight SS, Engel SR, Fisk DG, Hirschman JE, Hong EL, Nash R, Oughtred R, Skrzypek M, Theesfeld CL, Binkley G, Dong Q, Lane C, Sethuraman A, Weng S, Botstein D, Cherry JM.

Nucleic Acids Res. 2005 Jan 1;33(Database issue):D374-7.PMID: 15608219 [PubMed - indexed for MEDLINE]Related articlesFree article

The Gene Wiki: community intelligence applied to human gene annotation.

Huss JW 3rd, Lindenbaum P, Martone M, Roberts D, Pizarro A, Valafar F, Hogenesch JB, Su AI.

Nucleic Acids Res. 2010 Jan;38(Database issue):D633-9. Epub 2009 Sep 15.PMID: 19755503 [PubMed - indexed for MEDLINE]Related articlesFree article

Aspergillus genomes and the Aspergillus cloud.

Mabey Gilsenan JE, Atherton G, Bartholomew J, Giles PF, Attwood TK, Denning DW, Bowyer P.

Nucleic Acids Res. 2009 Jan;37(Database issue):D509-14. Epub 2008 Nov 27.PMID: 19039001 [PubMed - indexed for MEDLINE]Related articlesFree article

Yeast genomic databases and the challenge of the post-genomic era.

Garrels JI.

Funct Integr Genomics. 2002 Sep;2(4-5):212-37. Epub 2002 May 24. Review.PMID: 12192594 [PubMed - indexed for MEDLINE]Related articles

WebGMAP: a web service for mapping and aligning cDNA sequences to genomes.

Liang C, Liu L, Ji G.

Nucleic Acids Res. 2009 Jul 1;37(Web Server issue):W77-83. Epub 2009 May 22.PMID: 19465381 [PubMed - indexed for MEDLINE]Related articlesFree article

Infrastructure for the life sciences: design and implementation of the UniProt website.

Jain E, Bairoch A, Duvaud S, Phan I, Redaschi N, Suzek BE, Martin MJ, McGarvey P, Gasteiger E.

BMC Bioinformatics. 2009 May 8;10:136.PMID: 19426475 [PubMed - indexed for MEDLINE]Related articlesFree article

SNUGB: a versatile genome browser supporting comparative and functional fungal genomics.

Jung K, Park J, Choi J, Park B, Kim S, Ahn K, Choi J, Choi D, Kang S, Lee YH.

BMC Genomics. 2008 Dec 4;9:586.PMID: 19055845 [PubMed - indexed for MEDLINE]Related articlesFree article

The generic genome browser: a building block for a model organism system database.

Stein LD, Mungall C, Shu S, Caudy M, Mangone M, Day A, Nickerson E, Stajich JE, Harris TW, Arva A, Lewis S.

Genome Res. 2002 Oct;12(10):1599-610.PMID: 12368253 [PubMed - indexed for MEDLINE]Related articlesFree article

The Pichia pastoris formaldehyde dehydrogenase gene (FLD1) as a marker for selection of multicopy expression strains of P. pastoris.

Sunga AJ, Cregg JM.

Gene. 2004 Apr 14;330:39-47.PMID: 15087122 [PubMed - indexed for MEDLINE]Related articles

[MGAP-A microbe genome annotation platform]

Yu Z, Li T, Cai T, Zhao J, Luo J.

Wei Sheng Wu Xue Bao. 2003 Dec;43(6):805-8. Chinese. PMID: 16276906 [PubMed - indexed for MEDLINE]Related articles

The Mouse Genome Database genotypes::phenotypes.

Blake JA, Bult CJ, Eppig JT, Kadin JA, Richardson JE; Mouse Genome Database Group.

Nucleic Acids Res. 2009 Jan;37(Database issue):D712-9. Epub 2008 Nov 3.PMID: 18981050 [PubMed - indexed for MEDLINE]Related articlesFree article

EuCAP, a Eukaryotic Community Annotation Package, and its application to the rice genome.

Thibaud-Nissen F, Campbell M, Hamilton JP, Zhu W, Buell CR.

BMC Genomics. 2007 Oct 25;8:388.PMID: 17961238 [PubMed - indexed for MEDLINE]Related articlesFree article

The ENCODEdb portal: simplified access to ENCODE Consortium data.

Elnitski LL, Shah P, Moreland RT, Umayam L, Wolfsberg TG, Baxevanis AD.

Genome Res. 2007 Jun;17(6):954-9.PMID: 17568011 [PubMed - indexed for MEDLINE]Related articlesFree article

Bluejay 1.0: genome browsing and comparison with rich customization provision and dynamic resource linking.

Soh J, Gordon PM, Taschuk ML, Dong A, Ah-Seng AC, Turinsky AL, Sensen CW.

BMC Bioinformatics. 2008 Oct 22;9:450.PMID: 18940007 [PubMed - indexed for MEDLINE]Related articlesFree article

Piloting the zebrafish genome browser.

DiBiase A, Harte RA, Zhou Y, Zon L, Kent WJ.

Dev Dyn. 2006 Mar;235(3):747-53.PMID: 16372332 [PubMed - indexed for MEDLINE]Related articlesFree article

EnGenIUS -- Environmental Genome Informational Utility System.

Kaplarevic M, Murray AE, Cary SC, Gao GR.

J Bioinform Comput Biol. 2008 Dec;6(6):1193-211.PMID: 19090024 [PubMed - indexed for MEDLINE]Related articles