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    Results: 1 to 20 of 232

    1.

    Genome-wide comparative analysis of the Brassica rapa gene space reveals genome shrinkage and differential loss of duplicated genes after whole genome triplication.

    Mun JH, Kwon SJ, Yang TJ, Seol YJ, Jin M, Kim JA, Lim MH, Kim JS, Baek S, Choi BS, Yu HJ, Kim DS, Kim N, Lim KB, Lee SI, Hahn JH, Lim YP, Bancroft I, Park BS.

    Genome Biol. 2009;10(10):R111. Epub 2009 Oct 12.

    PMID:
    19821981
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Complexity of genome evolution by segmental rearrangement in Brassica rapa revealed by sequence-level analysis.

    Trick M, Kwon SJ, Choi SR, Fraser F, Soumpourou E, Drou N, Wang Z, Lee SY, Yang TJ, Mun JH, Paterson AH, Town CD, Pires JC, Pyo Lim Y, Park BS, Bancroft I.

    BMC Genomics. 2009 Nov 18;10:539.

    PMID:
    19922648
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    The genome of the mesopolyploid crop species Brassica rapa.

    Wang X, Wang H, Wang J, Sun R, Wu J, Liu S, Bai Y, Mun JH, Bancroft I, Cheng F, Huang S, Li X, Hua W, Wang J, Wang X, Freeling M, Pires JC, Paterson AH, Chalhoub B, Wang B, Hayward A, Sharpe AG, Park BS, Weisshaar B, Liu B, Li B, Liu B, Tong C, Song C, Duran C, Peng C, Geng C, Koh C, Lin C, Edwards D, Mu D, Shen D, Soumpourou E, Li F, Fraser F, Conant G, Lassalle G, King GJ, Bonnema G, Tang H, Wang H, Belcram H, Zhou H, Hirakawa H, Abe H, Guo H, Wang H, Jin H, Parkin IA, Batley J, Kim JS, Just J, Li J, Xu J, Deng J, Kim JA, Li J, Yu J, Meng J, Wang J, Min J, Poulain J, Wang J, Hatakeyama K, Wu K, Wang L, Fang L, Trick M, Links MG, Zhao M, Jin M, Ramchiary N, Drou N, Berkman PJ, Cai Q, Huang Q, Li R, Tabata S, Cheng S, Zhang S, Zhang S, Huang S, Sato S, Sun S, Kwon SJ, Choi SR, Lee TH, Fan W, Zhao X, Tan X, Xu X, Wang Y, Qiu Y, Yin Y, Li Y, Du Y, Liao Y, Lim Y, Narusaka Y, Wang Y, Wang Z, Li Z, Wang Z, Xiong Z, Zhang Z; Brassica rapa Genome Sequencing Project Consortium.

    Nat Genet. 2011 Aug 28;43(10):1035-9. doi: 10.1038/ng.919.

    PMID:
    21873998
    [PubMed - indexed for MEDLINE]
    4.

    Sequence and structure of Brassica rapa chromosome A3.

    Mun JH, Kwon SJ, Seol YJ, Kim JA, Jin M, Kim JS, Lim MH, Lee SI, Hong JK, Park TH, Lee SC, Kim BJ, Seo MS, Baek S, Lee MJ, Shin JY, Hahn JH, Hwang YJ, Lim KB, Park JY, Lee J, Yang TJ, Yu HJ, Choi IY, Choi BS, Choi SR, Ramchiary N, Lim YP, Fraser F, Drou N, Soumpourou E, Trick M, Bancroft I, Sharpe AG, Parkin IA, Batley J, Edwards D, Park BS.

    Genome Biol. 2010;11(9):R94. Epub 2010 Sep 27.

    PMID:
    20875114
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    Sequence-level analysis of the diploidization process in the triplicated FLOWERING LOCUS C region of Brassica rapa.

    Yang TJ, Kim JS, Kwon SJ, Lim KB, Choi BS, Kim JA, Jin M, Park JY, Lim MH, Kim HI, Lim YP, Kang JJ, Hong JH, Kim CB, Bhak J, Bancroft I, Park BS.

    Plant Cell. 2006 Jun;18(6):1339-47. Epub 2006 Apr 21.

    PMID:
    16632644
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Genome-wide identification of NBS-encoding resistance genes in Brassica rapa.

    Mun JH, Yu HJ, Park S, Park BS.

    Mol Genet Genomics. 2009 Dec;282(6):617-31. Epub 2009 Oct 17.

    PMID:
    19838736
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Sequenced BAC anchored reference genetic map that reconciles the ten individual chromosomes of Brassica rapa.

    Kim H, Choi SR, Bae J, Hong CP, Lee SY, Hossain MJ, Van Nguyen D, Jin M, Park BS, Bang JW, Bancroft I, Lim YP.

    BMC Genomics. 2009 Sep 15;10:432.

    PMID:
    19751531
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    The first generation of a BAC-based physical map of Brassica rapa.

    Mun JH, Kwon SJ, Yang TJ, Kim HS, Choi BS, Baek S, Kim JS, Jin M, Kim JA, Lim MH, Lee SI, Kim HI, Kim H, Lim YP, Park BS.

    BMC Genomics. 2008 Jun 12;9:280.

    PMID:
    18549474
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    Conservation of the microstructure of genome segments in Brassica napus and its diploid relatives.

    Rana D, van den Boogaart T, O'Neill CM, Hynes L, Bent E, Macpherson L, Park JY, Lim YP, Bancroft I.

    Plant J. 2004 Dec;40(5):725-33.

    PMID:
    15546355
    [PubMed - indexed for MEDLINE]
    10.

    Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes.

    Panjabi P, Jagannath A, Bisht NC, Padmaja KL, Sharma S, Gupta V, Pradhan AK, Pental D.

    BMC Genomics. 2008 Mar 3;9:113.

    PMID:
    18315867
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Sequence-level comparative analysis of the Brassica napus genome around two stearoyl-ACP desaturase loci.

    Cho K, O'Neill CM, Kwon SJ, Yang TJ, Smooker AM, Fraser F, Bancroft I.

    Plant J. 2010 Feb;61(4):591-9. Epub 2009 Nov 19.

    PMID:
    19929877
    [PubMed - indexed for MEDLINE]
    12.

    A Survey of the Brassica rapa genome by BAC-end sequence analysis and comparison with Arabidopsis thaliana.

    Hong CP, Plaha P, Koo DH, Yang TJ, Choi SR, Lee YK, Uhm T, Bang JW, Edwards D, Bancroft I, Park BS, Lee J, Lim YP.

    Mol Cells. 2006 Dec 31;22(3):300-7.

    PMID:
    17202858
    [PubMed - indexed for MEDLINE]
    13.

    A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome.

    Blanc G, Hokamp K, Wolfe KH.

    Genome Res. 2003 Feb;13(2):137-44.

    PMID:
    12566392
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    The evolution of Brassica napus FLOWERING LOCUS T paralogues in the context of inverted chromosomal duplication blocks.

    Wang J, Long Y, Wu B, Liu J, Jiang C, Shi L, Zhao J, King GJ, Meng J.

    BMC Evol Biol. 2009 Nov 25;9:271.

    PMID:
    19939256
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    Gene duplication and paleopolyploidy in soybean and the implications for whole genome sequencing.

    Schlueter JA, Lin JY, Schlueter SD, Vasylenko-Sanders IF, Deshpande S, Yi J, O'Bleness M, Roe BA, Nelson RT, Scheffler BE, Jackson SA, Shoemaker RC.

    BMC Genomics. 2007 Sep 19;8:330.

    PMID:
    17880721
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Simple sequence repeat-based comparative genomics between Brassica rapa and Arabidopsis thaliana: the genetic origin of clubroot resistance.

    Suwabe K, Tsukazaki H, Iketani H, Hatakeyama K, Kondo M, Fujimura M, Nunome T, Fukuoka H, Hirai M, Matsumoto S.

    Genetics. 2006 May;173(1):309-19.

    PMID:
    16723420
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    Physical mapping and microsynteny of Brassica rapa ssp. pekinensis genome corresponding to a 222 kbp gene-rich region of Arabidopsis chromosome 4 and partially duplicated on chromosome 5.

    Park JY, Koo DH, Hong CP, Lee SJ, Jeon JW, Lee SH, Yun PY, Park BS, Kim HR, Bang JW, Plaha P, Bancroft I, Lim YP.

    Mol Genet Genomics. 2005 Dec;274(6):579-88. Epub 2005 Nov 9.

    PMID:
    16283385
    [PubMed - indexed for MEDLINE]
    18.

    Comparative genomics of Brassica oleracea and Arabidopsis thaliana reveal gene loss, fragmentation, and dispersal after polyploidy.

    Town CD, Cheung F, Maiti R, Crabtree J, Haas BJ, Wortman JR, Hine EE, Althoff R, Arbogast TS, Tallon LJ, Vigouroux M, Trick M, Bancroft I.

    Plant Cell. 2006 Jun;18(6):1348-59. Epub 2006 Apr 21.

    PMID:
    16632643
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    Genome sequence of the palaeopolyploid soybean.

    Schmutz J, Cannon SB, Schlueter J, Ma J, Mitros T, Nelson W, Hyten DL, Song Q, Thelen JJ, Cheng J, Xu D, Hellsten U, May GD, Yu Y, Sakurai T, Umezawa T, Bhattacharyya MK, Sandhu D, Valliyodan B, Lindquist E, Peto M, Grant D, Shu S, Goodstein D, Barry K, Futrell-Griggs M, Abernathy B, Du J, Tian Z, Zhu L, Gill N, Joshi T, Libault M, Sethuraman A, Zhang XC, Shinozaki K, Nguyen HT, Wing RA, Cregan P, Specht J, Grimwood J, Rokhsar D, Stacey G, Shoemaker RC, Jackson SA.

    Nature. 2010 Jan 14;463(7278):178-83. Erratum in: Nature. 2010 May 6;465(7294):120.

    PMID:
    20075913
    [PubMed - indexed for MEDLINE]
    20.

    A newly-developed community microarray resource for transcriptome profiling in Brassica species enables the confirmation of Brassica-specific expressed sequences.

    Trick M, Cheung F, Drou N, Fraser F, Lobenhofer EK, Hurban P, Magusin A, Town CD, Bancroft I.

    BMC Plant Biol. 2009 May 8;9:50.

    PMID:
    19426481
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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