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    Results: 1 to 20 of 101

    1.

    Structural analysis of polarizing indels: an emerging consensus on the root of the tree of life.

    Valas RE, Bourne PE.

    Biol Direct. 2009 Aug 25;4:30.

    PMID:
    19706177
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Early evolutionary relationships among known life forms inferred from elongation factor EF-2/EF-G sequences: phylogenetic coherence and structure of the archaeal domain.

    Cammarano P, Palm P, Creti R, Ceccarelli E, Sanangelantoni AM, Tiboni O.

    J Mol Evol. 1992 May;34(5):396-405.

    PMID:
    1602493
    [PubMed - indexed for MEDLINE]
    3.

    The evidence that the tree of life is not rooted within the Archaea is unreliable: a reply to Skophammer et al.

    Di Giulio M.

    Gene. 2007 Jun 1;394(1-2):105-6. Epub 2007 Feb 12.

    PMID:
    17395404
    [PubMed - indexed for MEDLINE]
    4.

    Root of the universal tree of life based on ancient aminoacyl-tRNA synthetase gene duplications.

    Brown JR, Doolittle WF.

    Proc Natl Acad Sci U S A. 1995 Mar 28;92(7):2441-5.

    PMID:
    7708661
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    The root of the universal tree and the origin of eukaryotes based on elongation factor phylogeny.

    Baldauf SL, Palmer JD, Doolittle WF.

    Proc Natl Acad Sci U S A. 1996 Jul 23;93(15):7749-54.

    PMID:
    8755547
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Evidence for a gram-positive, eubacterial root of the tree of life.

    Skophammer RG, Servin JA, Herbold CW, Lake JA.

    Mol Biol Evol. 2007 Aug;24(8):1761-8. Epub 2007 May 19.

    PMID:
    17513883
    [PubMed - indexed for MEDLINE]
    Free Article
    8.

    Genome trees constructed using five different approaches suggest new major bacterial clades.

    Wolf YI, Rogozin IB, Grishin NV, Tatusov RL, Koonin EV.

    BMC Evol Biol. 2001 Oct 20;1:8.

    PMID:
    11734060
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    The root of the universal tree of life inferred from anciently duplicated genes encoding components of the protein-targeting machinery.

    Gribaldo S, Cammarano P.

    J Mol Evol. 1998 Nov;47(5):508-16.

    PMID:
    9797401
    [PubMed - indexed for MEDLINE]
    10.

    Bayesian coestimation of phylogeny and sequence alignment.

    Lunter G, Miklós I, Drummond A, Jensen JL, Hein J.

    BMC Bioinformatics. 2005 Apr 1;6:83.

    PMID:
    15804354
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Evolution of translational elongation factor (EF) sequences: reliability of global phylogenies inferred from EF-1 alpha(Tu) and EF-2(G) proteins.

    Creti R, Ceccarelli E, Bocchetta M, Sanangelantoni AM, Tiboni O, Palm P, Cammarano P.

    Proc Natl Acad Sci U S A. 1994 Apr 12;91(8):3255-9.

    PMID:
    8159735
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Evidence for a new root of the tree of life.

    Lake JA, Servin JA, Herbold CW, Skophammer RG.

    Syst Biol. 2008 Dec;57(6):835-43.

    PMID:
    19085327
    [PubMed - indexed for MEDLINE]
    13.

    Evolutionary relationship of archaebacteria, eubacteria, and eukaryotes inferred from phylogenetic trees of duplicated genes.

    Iwabe N, Kuma K, Hasegawa M, Osawa S, Miyata T.

    Proc Natl Acad Sci U S A. 1989 Dec;86(23):9355-9.

    PMID:
    2531898
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    The last universal common ancestor (LUCA) and the ancestors of archaea and bacteria were progenotes.

    Di Giulio M.

    J Mol Evol. 2011 Jan;72(1):119-26. Epub 2010 Nov 16.

    PMID:
    21079939
    [PubMed - indexed for MEDLINE]
    15.

    Bayesian phylogenetic analysis reveals two-domain topology of S-adenosylhomocysteine hydrolase protein sequences.

    Stepkowski T, Brzeziński K, Legocki AB, Jaskólski M, Béna G.

    Mol Phylogenet Evol. 2005 Jan;34(1):15-28.

    PMID:
    15579379
    [PubMed - indexed for MEDLINE]
    16.

    Translation elongation factor-3 (EF-3): an evolving eukaryotic ribosomal protein?

    Belfield GP, Ross-Smith NJ, Tuite MF.

    J Mol Evol. 1995 Sep;41(3):376-87.

    PMID:
    7563124
    [PubMed - indexed for MEDLINE]
    17.

    A phylogenomic profile of hemerythrins, the nonheme diiron binding respiratory proteins.

    Bailly X, Vanin S, Chabasse C, Mizuguchi K, Vinogradov SN.

    BMC Evol Biol. 2008 Sep 2;8:244.

    PMID:
    18764950
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    18.

    Genome networks root the tree of life between prokaryotic domains.

    Dagan T, Roettger M, Bryant D, Martin W.

    Genome Biol Evol. 2010 Jul 12;2:379-92. Print 2010.

    PMID:
    20624742
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    The rhomboids: a nearly ubiquitous family of intramembrane serine proteases that probably evolved by multiple ancient horizontal gene transfers.

    Koonin EV, Makarova KS, Rogozin IB, Davidovic L, Letellier MC, Pellegrini L.

    Genome Biol. 2003;4(3):R19. Epub 2003 Feb 28.

    PMID:
    12620104
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    The origins of modern proteomes.

    Kurland CG, Canbäck B, Berg OG.

    Biochimie. 2007 Dec;89(12):1454-63. Epub 2007 Sep 15.

    PMID:
    17949885
    [PubMed - indexed for MEDLINE]

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