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    Results: 1 to 20 of 114

    1.

    Community-wide analysis of microbial genome sequence signatures.

    Dick GJ, Andersson AF, Baker BJ, Simmons SL, Thomas BC, Yelton AP, Banfield JF.

    Genome Biol. 2009;10(8):R85. Epub 2009 Aug 21.

    PMID:
    19698104
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Final Report on Carcinogens Background Document for Formaldehyde.

    National Toxicology Program.

    Rep Carcinog Backgr Doc. 2010 Jan;(10-5981):i-512.

    PMID:
    20737003
    [PubMed - as supplied by publisher]
    3.

    A statistical toolbox for metagenomics: assessing functional diversity in microbial communities.

    Schloss PD, Handelsman J.

    BMC Bioinformatics. 2008 Jan 23;9:34.

    PMID:
    18215273
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria.

    Lo I, Denef VJ, Verberkmoes NC, Shah MB, Goltsman D, DiBartolo G, Tyson GW, Allen EE, Ram RJ, Detter JC, Richardson P, Thelen MP, Hettich RL, Banfield JF.

    Nature. 2007 Mar 29;446(7135):537-41. Epub 2007 Mar 7.

    PMID:
    17344860
    [PubMed - indexed for MEDLINE]
    5.

    Community structure and metabolism through reconstruction of microbial genomes from the environment.

    Tyson GW, Chapman J, Hugenholtz P, Allen EE, Ram RJ, Richardson PM, Solovyev VV, Rubin EM, Rokhsar DS, Banfield JF.

    Nature. 2004 Mar 4;428(6978):37-43. Epub 2004 Feb 1.

    PMID:
    14961025
    [PubMed - indexed for MEDLINE]
    7.

    Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing "Leptospirillum rubarum" (Group II) and "Leptospirillum ferrodiazotrophum" (Group III) bacteria in acid mine drainage biofilms.

    Goltsman DS, Denef VJ, Singer SW, VerBerkmoes NC, Lefsrud M, Mueller RS, Dick GJ, Sun CL, Wheeler KE, Zemla A, Baker BJ, Hauser L, Land M, Shah MB, Thelen MP, Hettich RL, Banfield JF.

    Appl Environ Microbiol. 2009 Jul;75(13):4599-615. Epub 2009 May 8.

    PMID:
    19429552
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Environments shape the nucleotide composition of genomes.

    Foerstner KU, von Mering C, Hooper SD, Bork P.

    EMBO Rep. 2005 Dec;6(12):1208-13.

    PMID:
    16200051
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    Proteogenomic approaches for the molecular characterization of natural microbial communities.

    Banfield JF, Verberkmoes NC, Hettich RL, Thelen MP.

    OMICS. 2005 Winter;9(4):301-33.

    PMID:
    16402891
    [PubMed - indexed for MEDLINE]
    10.

    The systemic imprint of growth and its uses in ecological (meta)genomics.

    Vieira-Silva S, Rocha EP.

    PLoS Genet. 2010 Jan 15;6(1):e1000808.

    PMID:
    20090831
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Microbial ecology in the age of genomics and metagenomics: concepts, tools, and recent advances.

    Xu J.

    Mol Ecol. 2006 Jun;15(7):1713-31. Review.

    PMID:
    16689892
    [PubMed - indexed for MEDLINE]
    12.

    Metagenomic signatures of 86 microbial and viral metagenomes.

    Willner D, Thurber RV, Rohwer F.

    Environ Microbiol. 2009 Jul;11(7):1752-66. Epub 2009 Mar 18.

    PMID:
    19302541
    [PubMed - indexed for MEDLINE]
    13.

    Targeted access to the genomes of low-abundance organisms in complex microbial communities.

    Podar M, Abulencia CB, Walcher M, Hutchison D, Zengler K, Garcia JA, Holland T, Cotton D, Hauser L, Keller M.

    Appl Environ Microbiol. 2007 May;73(10):3205-14. Epub 2007 Mar 16.

    PMID:
    17369337
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    Population genomic analysis of strain variation in Leptospirillum group II bacteria involved in acid mine drainage formation.

    Simmons SL, Dibartolo G, Denef VJ, Goltsman DS, Thelen MP, Banfield JF.

    PLoS Biol. 2008 Jul 22;6(7):e177.

    PMID:
    18651792
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    Genome signature analysis of thermal virus metagenomes reveals Archaea and thermophilic signatures.

    Pride DT, Schoenfeld T.

    BMC Genomics. 2008 Sep 17;9:420.

    PMID:
    18798991
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Metagenomic studies reveal the critical and wide-ranging ecological importance of uncultivated Archaea: the role of ammonia oxidizers.

    Cavicchioli R, Demaere MZ, Thomas T.

    Bioessays. 2007 Jan;29(1):11-4.

    PMID:
    17187352
    [PubMed - indexed for MEDLINE]
    17.

    Proteogenomic basis for ecological divergence of closely related bacteria in natural acidophilic microbial communities.

    Denef VJ, Kalnejais LH, Mueller RS, Wilmes P, Baker BJ, Thomas BC, VerBerkmoes NC, Hettich RL, Banfield JF.

    Proc Natl Acad Sci U S A. 2010 Feb 9;107(6):2383-90. Epub 2010 Feb 2.

    PMID:
    20133593
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    18.

    Amino acid composition of genomes, lifestyles of organisms, and evolutionary trends: a global picture with correspondence analysis.

    Tekaia F, Yeramian E, Dujon B.

    Gene. 2002 Sep 4;297(1-2):51-60.

    PMID:
    12384285
    [PubMed - indexed for MEDLINE]
    19.

    Design and testing of 'genome-proxy' microarrays to profile marine microbial communities.

    Rich VI, Konstantinidis K, DeLong EF.

    Environ Microbiol. 2008 Feb;10(2):506-21. Epub 2007 Nov 19.

    PMID:
    18028413
    [PubMed - indexed for MEDLINE]
    20.

    Final Report on Carcinogens Background Document for Styrene.

    National Toxicology Program.

    Rep Carcinog Backgr Doc. 2008 Sep;(8-5978):i-398.

    PMID:
    20737009
    [PubMed - as supplied by publisher]

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