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    Results: 1 to 20 of 363

    1.

    Whole genome sequencing of a single Bos taurus animal for single nucleotide polymorphism discovery.

    Eck SH, Benet-Pagès A, Flisikowski K, Meitinger T, Fries R, Strom TM.

    Genome Biol. 2009;10(8):R82. Epub 2009 Aug 6.

    PMID:
    19660108
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Large scale single nucleotide polymorphism discovery in unsequenced genomes using second generation high throughput sequencing technology: applied to turkey.

    Kerstens HH, Crooijmans RP, Veenendaal A, Dibbits BW, Chin-A-Woeng TF, den Dunnen JT, Groenen MA.

    BMC Genomics. 2009 Oct 16;10:479.

    PMID:
    19835600
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Discovery, characterization and validation of single nucleotide polymorphisms within 206 bovine genes that may be considered as candidate genes for beef production and quality.

    Williams JL, Dunner S, Valentini A, Mazza R, Amarger V, Checa ML, Crisà A, Razzaq N, Delourme D, Grandjean F, Marchitelli C, García D, Gomez RP, Negrini R, Marsan PA, Levéziel H.

    Anim Genet. 2009 Aug;40(4):486-91. Epub 2009 Apr 16.

    PMID:
    19397516
    [PubMed - indexed for MEDLINE]
    4.

    SNP discovery in swine by reduced representation and high throughput pyrosequencing.

    Wiedmann RT, Smith TP, Nonneman DJ.

    BMC Genet. 2008 Dec 4;9:81.

    PMID:
    19055830
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    Discovery, validation and characterization of 1039 cattle single nucleotide polymorphisms.

    Donthu R, Larkin DM, Heaton MP, Lewin HA.

    Anim Genet. 2010 Aug;41(4):421-3. Epub 2009 Nov 26.

    PMID:
    19958345
    [PubMed - indexed for MEDLINE]
    7.

    Application of massive parallel sequencing to whole genome SNP discovery in the porcine genome.

    Amaral AJ, Megens HJ, Kerstens HH, Heuven HC, Dibbits B, Crooijmans RP, den Dunnen JT, Groenen MA.

    BMC Genomics. 2009 Aug 12;10:374.

    PMID:
    19674453
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery.

    Stothard P, Choi JW, Basu U, Sumner-Thomson JM, Meng Y, Liao X, Moore SS.

    BMC Genomics. 2011 Nov 15;12:559.

    PMID:
    22085807
    [PubMed - in process]
    Free PMC Article
    9.

    Identification of SNPs and INDELS in swine transcribed sequences using short oligonucleotide microarrays.

    Bischoff SR, Tsai S, Hardison NE, York AM, Freking BA, Nonneman D, Rohrer G, Piedrahita JA.

    BMC Genomics. 2008 May 29;9:252.

    PMID:
    18510738
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    Genome-wide discovery of DNA polymorphism in Brassica rapa.

    Park S, Yu HJ, Mun JH, Lee SC.

    Mol Genet Genomics. 2010 Feb;283(2):135-45. Epub 2009 Dec 19.

    PMID:
    20024583
    [PubMed - indexed for MEDLINE]
    11.

    SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries.

    Van Tassell CP, Smith TP, Matukumalli LK, Taylor JF, Schnabel RD, Lawley CT, Haudenschild CD, Moore SS, Warren WC, Sonstegard TS.

    Nat Methods. 2008 Mar;5(3):247-52. Epub 2008 Feb 24.

    PMID:
    18297082
    [PubMed - indexed for MEDLINE]
    12.

    The development and characterization of a 60K SNP chip for chicken.

    Groenen MA, Megens HJ, Zare Y, Warren WC, Hillier LW, Crooijmans RP, Vereijken A, Okimoto R, Muir WM, Cheng HH.

    BMC Genomics. 2011 May 31;12(1):274.

    PMID:
    21627800
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    Establishment of a pipeline to analyse non-synonymous SNPs in Bos taurus.

    Lee MA, Keane OM, Glass BC, Manley TR, Cullen NG, Dodds KG, McCulloch AF, Morris CA, Schreiber M, Warren J, Zadissa A, Wilson T, McEwan JC.

    BMC Genomics. 2006 Nov 26;7:298.

    PMID:
    17125523
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    Discovery of genome-wide DNA polymorphisms in a landrace cultivar of Japonica rice by whole-genome sequencing.

    Arai-Kichise Y, Shiwa Y, Nagasaki H, Ebana K, Yoshikawa H, Yano M, Wakasa K.

    Plant Cell Physiol. 2011 Feb;52(2):274-82. Epub 2011 Jan 21.

    PMID:
    21258067
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    An assessment of population structure in eight breeds of cattle using a whole genome SNP panel.

    McKay SD, Schnabel RD, Murdoch BM, Matukumalli LK, Aerts J, Coppieters W, Crews D, Dias Neto E, Gill CA, Gao C, Mannen H, Wang Z, Van Tassell CP, Williams JL, Taylor JF, Moore SS.

    BMC Genet. 2008 May 20;9:37.

    PMID:
    18492244
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Mining for single nucleotide polymorphisms in pig genome sequence data.

    Kerstens HH, Kollers S, Kommadath A, Del Rosario M, Dibbits B, Kinders SM, Crooijmans RP, Groenen MA.

    BMC Genomics. 2009 Jan 6;10:4.

    PMID:
    19126189
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    Accurate detection and genotyping of SNPs utilizing population sequencing data.

    Bansal V, Harismendy O, Tewhey R, Murray SS, Schork NJ, Topol EJ, Frazer KA.

    Genome Res. 2010 Apr;20(4):537-45. Epub 2010 Feb 11.

    PMID:
    20150320
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    18.

    Compilation of a panel of informative single nucleotide polymorphisms for bovine identification in the Northern Irish cattle population.

    Allen AR, Taylor M, McKeown B, Curry AI, Lavery JF, Mitchell A, Hartshorne D, Fries R, Skuce RA.

    BMC Genet. 2010 Jan 25;11:5.

    PMID:
    20100323
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    Single nucleotide polymorphism discovery in rainbow trout by deep sequencing of a reduced representation library.

    Sánchez CC, Smith TP, Wiedmann RT, Vallejo RL, Salem M, Yao J, Rexroad CE 3rd.

    BMC Genomics. 2009 Nov 25;10:559.

    PMID:
    19939274
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    High-density single-nucleotide polymorphism maps of the human genome.

    Miller RD, Phillips MS, Jo I, Donaldson MA, Studebaker JF, Addleman N, Alfisi SV, Ankener WM, Bhatti HA, Callahan CE, Carey BJ, Conley CL, Cyr JM, Derohannessian V, Donaldson RA, Elosua C, Ford SE, Forman AM, Gelfand CA, Grecco NM, Gutendorf SM, Hock CR, Hozza MJ, Hur S, In SM, Jackson DL, Jo SA, Jung SC, Kim S, Kimm K, Kloss EF, Koboldt DC, Kuebler JM, Kuo FS, Lathrop JA, Lee JK, Leis KL, Livingston SA, Lovins EG, Lundy ML, Maggan S, Minton M, Mockler MA, Morris DW, Nachtman EP, Oh B, Park C, Park CW, Pavelka N, Perkins AB, Restine SL, Sachidanandam R, Reinhart AJ, Scott KE, Shah GJ, Tate JM, Varde SA, Walters A, White JR, Yoo YK, Lee JE, Boyce-Jacino MT, Kwok PY; SNP Consortium Allele Frequency Project.

    Genomics. 2005 Aug;86(2):117-26.

    PMID:
    15961272
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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