PubMed

Trace2PS and FSA2PS: two software toolkits for converting trace and fsa files to PostScript format.

Krawczyk J, Goesmann A, Nolte R, Werber M, Weisshaar B.

Source Code Biol Med. 2009 Jul 21;4:4.PMID: 19622158 [PubMed - in process]Free PMC ArticleFree textRelated citations

preAssemble: a tool for automatic sequencer trace data processing.

Adzhubei AA, Laerdahl JK, Vlasova AV.

BMC Bioinformatics. 2006 Jan 17;7:22.PMID: 16417643 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

VSQual: a visual system to assist DNA sequencing quality control.

Binneck E, Silva JF, Neumaier N, Farias JR, Nepomuceno AL.

Genet Mol Res. 2004 Dec 30;3(4):474-82.PMID: 15688314 [PubMed - indexed for MEDLINE]Free ArticleRelated citations

Efficient analysis and extraction of MS/MS result data from Mascot result files.

Grosse-Coosmann F, Boehm AM, Sickmann A.

BMC Bioinformatics. 2005 Dec 7;6:290.PMID: 16336652 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Web-based X-ray quality control documentation.

David G, Burnett LA, Schenkel R.

Radiol Manage. 2003 Mar-Apr;25(2):32-5.PMID: 12800562 [PubMed - indexed for MEDLINE]Related citations

ESTPiper--a web-based analysis pipeline for expressed sequence tags.

Tang Z, Choi JH, Hemmerich C, Sarangi A, Colbourne JK, Dong Q.

BMC Genomics. 2009 Apr 21;10:174.PMID: 19383159 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

ZTR: a new format for DNA sequence trace data.

Bonfield JK, Staden R.

Bioinformatics. 2002 Jan;18(1):3-10.PMID: 11836205 [PubMed - indexed for MEDLINE]Free ArticleRelated citations

POSA: perl objects for DNA sequencing data analysis.

Aerts JA, Jungerius BJ, Groenen MA.

BMC Genomics. 2004 Aug 27;5(1):60.PMID: 15333141 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

A proposed standard data file format for hyperthermia treatments.

Sapareto SA, Corry PM.

Int J Radiat Oncol Biol Phys. 1989 Mar;16(3):613-27.PMID: 2921163 [PubMed - indexed for MEDLINE]Related citations

SNPFile--a software library and file format for large scale association mapping and population genetics studies.

Nielsen J, Mailund T.

BMC Bioinformatics. 2008 Dec 8;9:526.PMID: 19063732 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

SBML2L(A)T(E)X: conversion of SBML files into human-readable reports.

Dräger A, Planatscher H, Motsou Wouamba D, Schröder A, Hucka M, Endler L, Golebiewski M, Müller W, Zell A.

Bioinformatics. 2009 Jun 1;25(11):1455-6. Epub 2009 Mar 23.PMID: 19307240 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

SDRF2GRAPH: a visualization tool of a spreadsheet-based description of experimental processes.

Kawaji H, Hayashizaki Y, Daub CO.

BMC Bioinformatics. 2009 May 7;10:133.PMID: 19422683 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Hopper: software for automating data tracking and flow in DNA sequencing.

Smith TM, Abajian C, Hood L.

Comput Appl Biosci. 1997 Apr;13(2):175-82.PMID: 9146965 [PubMed - indexed for MEDLINE]Related citations

EST processing: from trace to sequence.

Schmid R, Blaxter M.

Methods Mol Biol. 2009;533:189-220.PMID: 19277557 [PubMed - indexed for MEDLINE]Related citations

Web servlet-assisted, dial-in flow cytometry data analysis.

Battye F.

Cytometry. 2001 Feb 1;43(2):143-9.PMID: 11169579 [PubMed - indexed for MEDLINE]Related citations

FASconCAT: Convenient handling of data matrices.

Kück P, Meusemann K.

Mol Phylogenet Evol. 2010 Sep;56(3):1115-8. Epub 2010 Apr 21.PMID: 20416383 [PubMed - indexed for MEDLINE]Related citations

Software scripts for quality checking of high-throughput nucleic acid sequencers.

Lazo GR, Tong J, Miller R, Hsia C, Rausch C, Kang Y, Anderson OD.

Biotechniques. 2001 Jun;30(6):1300-5.PMID: 11414222 [PubMed - indexed for MEDLINE]Related citations

ABI sequencing analysis. Manipulation of sequence data from the ABI DNA sequencer.

Hagemann TL, Kwan SP.

Mol Biotechnol. 1999 Dec 1;13(2):137-52. Review.PMID: 10934528 [PubMed - indexed for MEDLINE]Related citations

SPLICE, a computer program for automated extraction of information from GenBank sequence entries.

Dubnick M, Mount DW.

Comput Appl Biosci. 1990 Oct;6(4):343-6.PMID: 2257494 [PubMed - indexed for MEDLINE]Related citations

A standard file format for data from DNA sequencing instruments.

Dear S, Staden R.

DNA Seq. 1992;3(2):107-10.PMID: 1457811 [PubMed - indexed for MEDLINE]Related citations