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    Results: 1 to 20 of 89

    1.

    Advances in the identification and analysis of allele-specific expression.

    Bell CG, Beck S.

    Genome Med. 2009 May 29;1(5):56.

    PMID:
    19490587
    [PubMed]
    Free PMC Article
    2.

    Final Report on Carcinogens Background Document for Formaldehyde.

    National Toxicology Program.

    Rep Carcinog Backgr Doc. 2010 Jan;(10-5981):i-512.

    PMID:
    20737003
    [PubMed - as supplied by publisher]
    3.

    Final Report on Carcinogens Background Document for Styrene.

    National Toxicology Program.

    Rep Carcinog Backgr Doc. 2008 Sep;(8-5978):i-398.

    PMID:
    20737009
    [PubMed - as supplied by publisher]
    4.

    Genome-wide analysis of allelic expression imbalance in human primary cells by high-throughput transcriptome resequencing.

    Heap GA, Yang JH, Downes K, Healy BC, Hunt KA, Bockett N, Franke L, Dubois PC, Mein CA, Dobson RJ, Albert TJ, Rodesch MJ, Clayton DG, Todd JA, van Heel DA, Plagnol V.

    Hum Mol Genet. 2010 Jan 1;19(1):122-34. Epub .

    PMID:
    19825846
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    AlleleSeq: analysis of allele-specific expression and binding in a network framework.

    Rozowsky J, Abyzov A, Wang J, Alves P, Raha D, Harmanci A, Leng J, Bjornson R, Kong Y, Kitabayashi N, Bhardwaj N, Rubin M, Snyder M, Gerstein M.

    Mol Syst Biol. 2011 Aug 2;7:522. doi: 10.1038/msb.2011.54.

    PMID:
    21811232
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    High-throughput analysis of candidate imprinted genes and allele-specific gene expression in the human term placenta.

    Daelemans C, Ritchie ME, Smits G, Abu-Amero S, Sudbery IM, Forrest MS, Campino S, Clark TG, Stanier P, Kwiatkowski D, Deloukas P, Dermitzakis ET, Tavaré S, Moore GE, Dunham I.

    BMC Genet. 2010 Apr 19;11:25.

    PMID:
    20403199
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    A powerful and flexible statistical framework for testing hypotheses of allele-specific gene expression from RNA-seq data.

    Skelly DA, Johansson M, Madeoy J, Wakefield J, Akey JM.

    Genome Res. 2011 Oct;21(10):1728-37. Epub 2011 Aug 26.

    PMID:
    21873452
    [PubMed - indexed for MEDLINE]
    8.

    Allele-specific expression assays using Solexa.

    Main BJ, Bickel RD, McIntyre LM, Graze RM, Calabrese PP, Nuzhdin SV.

    BMC Genomics. 2009 Sep 9;10:422.

    PMID:
    19740431
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    Genome-wide survey of allele-specific splicing in humans.

    Nembaware V, Lupindo B, Schouest K, Spillane C, Scheffler K, Seoighe C.

    BMC Genomics. 2008 Jun 2;9:265.

    PMID:
    18518984
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    Data analysis issues for allele-specific expression using Illumina's GoldenGate assay.

    Ritchie ME, Forrest MS, Dimas AS, Daelemans C, Dermitzakis ET, Deloukas P, Tavaré S.

    BMC Bioinformatics. 2010 May 26;11:280.

    PMID:
    20504309
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Tumor transcriptome sequencing reveals allelic expression imbalances associated with copy number alterations.

    Tuch BB, Laborde RR, Xu X, Gu J, Chung CB, Monighetti CK, Stanley SJ, Olsen KD, Kasperbauer JL, Moore EJ, Broomer AJ, Tan R, Brzoska PM, Muller MW, Siddiqui AS, Asmann YW, Sun Y, Kuersten S, Barker MA, De La Vega FM, Smith DI.

    PLoS One. 2010 Feb 19;5(2):e9317.

    PMID:
    20174472
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Differential allelic expression in the human genome: a robust approach to identify genetic and epigenetic cis-acting mechanisms regulating gene expression.

    Serre D, Gurd S, Ge B, Sladek R, Sinnett D, Harmsen E, Bibikova M, Chudin E, Barker DL, Dickinson T, Fan JB, Hudson TJ.

    PLoS Genet. 2008 Feb 29;4(2):e1000006.

    PMID:
    18454203
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data.

    Degner JF, Marioni JC, Pai AA, Pickrell JK, Nkadori E, Gilad Y, Pritchard JK.

    Bioinformatics. 2009 Dec 15;25(24):3207-12. Epub 2009 Oct 6.

    PMID:
    19808877
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    Allele-specific KRT1 expression is a complex trait.

    Tao H, Cox DR, Frazer KA.

    PLoS Genet. 2006 Jun;2(6):e93. Epub 2006 Jun 9.

    PMID:
    16789827
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    Allele-specific expression in the germline of patients with familial pancreatic cancer: an unbiased approach to cancer gene discovery.

    Tan AC, Fan JB, Karikari C, Bibikova M, Garcia EW, Zhou L, Barker D, Serre D, Feldmann G, Hruban RH, Klein AP, Goggins M, Couch FJ, Hudson TJ, Winslow RL, Maitra A, Chakravarti A.

    Cancer Biol Ther. 2008 Jan;7(1):135-44. Epub 2007 Oct 19.

    PMID:
    18059179
    [PubMed - indexed for MEDLINE]
    Free Article
    16.

    The first set of EST resource for gene discovery and marker development in pigeonpea (Cajanus cajan L.).

    Raju NL, Gnanesh BN, Lekha P, Jayashree B, Pande S, Hiremath PJ, Byregowda M, Singh NK, Varshney RK.

    BMC Plant Biol. 2010 Mar 11;10:45.

    PMID:
    20222972
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    Allele-specific expression of TGFBR1 in colon cancer patients.

    Tomsic J, Guda K, Liyanarachchi S, Hampel H, Natale L, Markowitz SD, Tanner SM, de la Chapelle A.

    Carcinogenesis. 2010 Oct;31(10):1800-4. Epub 2010 Aug 12.

    PMID:
    20705955
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    18.

    Allele-specific gene expression patterns in primary leukemic cells reveal regulation of gene expression by CpG site methylation.

    Milani L, Lundmark A, Nordlund J, Kiialainen A, Flaegstad T, Jonmundsson G, Kanerva J, Schmiegelow K, Gunderson KL, Lönnerholm G, Syvänen AC.

    Genome Res. 2009 Jan;19(1):1-11. Epub 2008 Nov 7.

    PMID:
    18997001
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    Accurate detection and genotyping of SNPs utilizing population sequencing data.

    Bansal V, Harismendy O, Tewhey R, Murray SS, Schork NJ, Topol EJ, Frazer KA.

    Genome Res. 2010 Apr;20(4):537-45. Epub 2010 Feb 11.

    PMID:
    20150320
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    Validating discovered Cis-acting regulatory genetic variants: application of an allele specific expression approach to HapMap populations.

    Campino S, Forton J, Raj S, Mohr B, Auburn S, Fry A, Mangano VD, Vandiedonck C, Richardson A, Rockett K, Clark TG, Kwiatkowski DP.

    PLoS One. 2008;3(12):e4105. Epub 2008 Dec 31.

    PMID:
    19116668
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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