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    Results: 1 to 20 of 93

    1.

    Adaptable gene-specific dye bias correction for two-channel DNA microarrays.

    Margaritis T, Lijnzaad P, van Leenen D, Bouwmeester D, Kemmeren P, van Hooff SR, Holstege FC.

    Mol Syst Biol. 2009;5:266. Epub 2009 Apr 28.PMID: 19401678 [PubMed - indexed for MEDLINE]Related articlesFree article

    2.

    Characterizing dye bias in microarray experiments.

    Dobbin KK, Kawasaki ES, Petersen DW, Simon RM.

    Bioinformatics. 2005 May 15;21(10):2430-7. Epub 2005 Mar 17.PMID: 15774555 [PubMed - indexed for MEDLINE]Related articlesFree article

    3.

    Statistical design of reverse dye microarrays.

    Dobbin K, Shih JH, Simon R.

    Bioinformatics. 2003 May 1;19(7):803-10.PMID: 12724289 [PubMed - indexed for MEDLINE]Related articlesFree article

    4.

    Dye bias correction in dual-labeled cDNA microarray gene expression measurements.

    Rosenzweig BA, Pine PS, Domon OE, Morris SM, Chen JJ, Sistare FD.

    Environ Health Perspect. 2004 Mar;112(4):480-7.PMID: 15033598 [PubMed - indexed for MEDLINE]Related articlesFree article

    5.

    Assessing probe-specific dye and slide biases in two-color microarray data.

    Lu R, Lee GC, Shultz M, Dardick C, Jung K, Phetsom J, Jia Y, Rice RH, Goldberg Z, Schnable PS, Ronald P, Rocke DM.

    BMC Bioinformatics. 2008 Jul 19;9:314.PMID: 18638416 [PubMed - indexed for MEDLINE]Related articlesFree article

    6.

    Evaluation of the gene-specific dye bias in cDNA microarray experiments.

    Martin-Magniette ML, Aubert J, Cabannes E, Daudin JJ.

    Bioinformatics. 2005 May 1;21(9):1995-2000. Epub 2005 Feb 2.PMID: 15691855 [PubMed - indexed for MEDLINE]Related articlesFree article

    7.

    Normalization for triple-target microarray experiments.

    Martin-Magniette ML, Aubert J, Bar-Hen A, Elftieh S, Magniette F, Renou JP, Daudin JJ.

    BMC Bioinformatics. 2008 Apr 28;9:216.PMID: 18442385 [PubMed - indexed for MEDLINE]Related articlesFree article

    8.

    Correcting for gene-specific dye bias in DNA microarrays using the method of maximum likelihood.

    Kelley R, Feizi H, Ideker T.

    Bioinformatics. 2008 Jan 1;24(1):71-7. Epub 2007 Jul 10.PMID: 17623705 [PubMed - indexed for MEDLINE]Related articlesFree article

    9.

    Quality assessment of microarrays: visualization of spatial artifacts and quantitation of regional biases.

    Reimers M, Weinstein JN.

    BMC Bioinformatics. 2005 Jul 1;6:166.PMID: 15992406 [PubMed - indexed for MEDLINE]Related articlesFree article

    10.

    The intraclass correlation coefficient applied for evaluation of data correction, labeling methods, and rectal biopsy sampling in DNA microarray experiments.

    Pellis L, Franssen-van Hal NL, Burema J, Keijer J.

    Physiol Genomics. 2003 Dec 16;16(1):99-106.PMID: 14570982 [PubMed - indexed for MEDLINE]Related articles

    11.

    A robust neural networks approach for spatial and intensity-dependent normalization of cDNA microarray data.

    Tarca AL, Cooke JE, Mackay J.

    Bioinformatics. 2005 Jun 1;21(11):2674-83. Epub 2005 Mar 29.PMID: 15797913 [PubMed - indexed for MEDLINE]Related articlesFree article

    12.

    Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays.

    Wang Y, Barbacioru C, Hyland F, Xiao W, Hunkapiller KL, Blake J, Chan F, Gonzalez C, Zhang L, Samaha RR.

    BMC Genomics. 2006 Mar 21;7:59.PMID: 16551369 [PubMed - indexed for MEDLINE]Related articlesFree article

    13.

    Design and fabrication of spotted long oligonucleotide microarrays for gene expression analysis.

    Chou CC, Peck K.

    Methods Mol Biol. 2007;381:213-25.PMID: 17984521 [PubMed - indexed for MEDLINE]Related articles

    14.

    Application of four dyes in gene expression analyses by microarrays.

    Staal YC, van Herwijnen MH, van Schooten FJ, van Delft JH.

    BMC Genomics. 2005 Jul 25;6:101.PMID: 16042794 [PubMed - indexed for MEDLINE]Related articlesFree article

    16.

    Effect of data normalization on fuzzy clustering of DNA microarray data.

    Kim SY, Lee JW, Bae JS.

    BMC Bioinformatics. 2006 Mar 14;7:134.PMID: 16533412 [PubMed - indexed for MEDLINE]Related articlesFree article

    17.

    Normalization and experimental design for ChIP-chip data.

    Peng S, Alekseyenko AA, Larschan E, Kuroda MI, Park PJ.

    BMC Bioinformatics. 2007 Jun 25;8:219.PMID: 17592629 [PubMed - indexed for MEDLINE]Related articlesFree article

    18.

    Calibration and assessment of channel-specific biases in microarray data with extended dynamical range.

    Bengtsson H, Jönsson G, Vallon-Christersson J.

    BMC Bioinformatics. 2004 Nov 12;5:177.PMID: 15541170 [PubMed - indexed for MEDLINE]Related articlesFree article

    19.

    Model selection and efficiency testing for normalization of cDNA microarray data.

    Futschik M, Crompton T.

    Genome Biol. 2004;5(8):R60. Epub 2004 Jul 30.PMID: 15287982 [PubMed - indexed for MEDLINE]Related articlesFree article

    20.

    Novel design and controls for focused DNA microarrays: applications in quality assurance/control and normalization for the Health Canada ToxArray.

    Yauk CL, Williams A, Boucher S, Berndt LM, Zhou G, Zheng JL, Rowan-Carroll A, Dong H, Lambert IB, Douglas GR, Parfett CL.

    BMC Genomics. 2006 Oct 19;7:266.PMID: 17052352 [PubMed - indexed for MEDLINE]Related articlesFree article

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