PubMed

A kernel-based integration of genome-wide data for clinical decision support.

Daemen A, Gevaert O, Ojeda F, Debucquoy A, Suykens JA, Sempoux C, Machiels JP, Haustermans K, De Moor B.

Genome Med. 2009 Apr 3;1(4):39.PMID: 19356222 [PubMed - in process]Related articlesFree article

Integrating microarray and proteomics data to predict the response on cetuximab in patients with rectal cancer.

Daemen A, Gevaert O, De Bie T, Debucquoy A, Machiels JP, De Moor B, Haustermans K.

Pac Symp Biocomput. 2008:166-77.PMID: 18229684 [PubMed - indexed for MEDLINE]Related articlesFree article

Integration of clinical and microarray data with kernel methods.

Daemen A, Gevaert O, De Moor B.

Conf Proc IEEE Eng Med Biol Soc. 2007;2007:5411-5.PMID: 18003232 [PubMed - indexed for MEDLINE]Related articles

Feature selection and classification of MAQC-II breast cancer and multiple myeloma microarray gene expression data.

Liu Q, Sung AH, Chen Z, Liu J, Huang X, Deng Y.

PLoS One. ;4(12):e8250.PMID: 20011240 [PubMed - in process]Related articlesFree article

A statistical framework for integrating two microarray data sets in differential expression analysis.

Lai Y, Eckenrode SE, She JX.

BMC Bioinformatics. 2009 Jan 30;10 Suppl 1:S23.PMID: 19208123 [PubMed - indexed for MEDLINE]Related articlesFree article

Integrative approaches to the prediction of protein functions based on the feature selection.

Ko S, Lee H.

BMC Bioinformatics. 2009 Dec 31;10:455.PMID: 20043848 [PubMed - in process]Related articlesFree article

An application of methods for the probabilistic three-class classification of pregnancies of unknown location.

Van Calster B, Condous G, Kirk E, Bourne T, Timmerman D, Van Huffel S.

Artif Intell Med. 2009 Jun;46(2):139-54. Epub 2009 Jan 20.PMID: 19157812 [PubMed - indexed for MEDLINE]Related articles

Machine learning-based receiver operating characteristic (ROC) curves for crisp and fuzzy classification of DNA microarrays in cancer research.

Peterson LE, Coleman MA.

Int J Approx Reason. 2008 Jan;47(1):17-36.PMID: 19079753 [PubMed]Related articlesFree article

Supervised classification of array CGH data with HMM-based feature selection.

Daemen A, Gevaert O, Leunen K, Legius E, Vergote I, De Moor B.

Pac Symp Biocomput. 2009:468-79.PMID: 19209723 [PubMed - indexed for MEDLINE]Related articlesFree article

A Novel Cross-Disciplinary Multi-Institute Approach to Translational Cancer Research: Lessons Learned from Pennsylvania Cancer Alliance Bioinformatics Consortium (PCABC).

Patel AA, Gilbertson JR, Showe LC, London JW, Ross E, Ochs MF, Carver J, Lazarus A, Parwani AV, Dhir R, Beck JR, Liebman M, Garcia FU, Prichard J, Wilkerson M, Herberman RB, Becich MJ; the PCABC.

Cancer Inform. 2007 Jun 8;3:255-274.PMID: 19455246 [PubMed - as supplied by publisher]Related articlesFree article

Multiclass cancer classification by support vector machines with class-wise optimized genes and probability estimates.

Anand A, Suganthan PN.

J Theor Biol. 2009 Aug 7;259(3):533-40. Epub 2009 May 3.PMID: 19406131 [PubMed - indexed for MEDLINE]Related articles

A general integrative genomic feature transcription factor binding site prediction method applied to analysis of USF1 binding in cardiovascular disease.

Wang T, Furey TS, Connelly JJ, Ji S, Nelson S, Heber S, Gregory SG, Hauser ER.

Hum Genomics. 2009 Apr;3(3):221-35.PMID: 19403457 [PubMed - indexed for MEDLINE]Related articles

Using benefit-cost ratio to select Universal Newborn Hearing Screening test criteria.

Porter HL, Neely ST, Gorga MP.

Ear Hear. 2009 Aug;30(4):447-57.PMID: 19455038 [PubMed - indexed for MEDLINE]Related articles

Integrative analysis of gene expression data including an assessment of pathway enrichment for predicting prostate cancer.

Hu P, Greenwood CM, Beyene J.

Cancer Inform. 2007 Feb 21;2:289-300.PMID: 19458772 [PubMed - in process]Related articlesFree article

Improving gene expression cancer molecular pattern discovery using nonnegative principal component analysis.

Han X.

Genome Inform. 2008;21:200-11.PMID: 19425159 [PubMed - indexed for MEDLINE]Related articlesFree article

Comparison of feature selection and classification for MALDI-MS data.

Liu Q, Sung AH, Qiao M, Chen Z, Yang JY, Yang MQ, Huang X, Deng Y.

BMC Genomics. 2009 Jul 7;10 Suppl 1:S3.PMID: 19594880 [PubMed - indexed for MEDLINE]Related articlesFree article

geneCBR: a translational tool for multiple-microarray analysis and integrative information retrieval for aiding diagnosis in cancer research.

Glez-Peña D, Díaz F, Hernández JM, Corchado JM, Fdez-Riverola F.

BMC Bioinformatics. 2009 Jun 18;10:187.PMID: 19538727 [PubMed - indexed for MEDLINE]Related articlesFree article

Probability landscapes for integrative genomics.

Lesne A, Benecke A.

Theor Biol Med Model. 2008 May 20;5:9.PMID: 18492240 [PubMed - indexed for MEDLINE]Related articlesFree article

Development of a microarray platform for FFPET profiling: application to the classification of human tumors.

Duenwald S, Zhou M, Wang Y, Lejnine S, Kulkarni A, Graves J, Smith R, Castle J, Tokiwa G, Fine B, Dai H, Fare T, Marton M.

J Transl Med. 2009 Jul 28;7:65.PMID: 19638234 [PubMed - indexed for MEDLINE]Related articlesFree article

Colon cancer prediction with genetic profiles using intelligent techniques.

Alladi SM, P SS, Ravi V, Murthy US.

Bioinformation. 2008;3(3):130-3. Epub 2008 Nov 4.PMID: 19238250 [PubMed - in process]Related articlesFree article