PubMed

Synthesizing non-natural parts from natural genomic template.

Dhar PK, Thwin CS, Tun K, Tsumoto Y, Maurer-Stroh S, Eisenhaber F, Surana U.

J Biol Eng. 2009 Feb 3;3:2.PMID: 19187561 [PubMed]Free PMC ArticleFree textRelated citations

[Analysis, identification and correction of some errors of model refseqs appeared in NCBI Human Gene Database by in silico cloning and experimental verification of novel human genes]

Zhang DL, Ji L, Li YD.

Yi Chuan Xue Bao. 2004 May;31(5):431-43. Chinese. PMID: 15478601 [PubMed - indexed for MEDLINE]Related citations

Massive non-natural proteins structure prediction using grid technologies.

Minervini G, Evangelista G, Villanova L, Slanzi D, De Lucrezia D, Poli I, Luisi PL, Polticelli F.

BMC Bioinformatics. 2009 Jun 16;10 Suppl 6:S22.PMID: 19534748 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Natural selection and algorithmic design of mRNA.

Cohen B, Skiena S.

J Comput Biol. 2003;10(3-4):419-32.PMID: 12935336 [PubMed - indexed for MEDLINE]Related citations

Computational prediction of novel non-coding RNAs in Arabidopsis thaliana.

Song D, Yang Y, Yu B, Zheng B, Deng Z, Lu BL, Chen X, Jiang T.

BMC Bioinformatics. 2009 Jan 30;10 Suppl 1:S36.PMID: 19208137 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Prediction of RNA-binding proteins from primary sequence by a support vector machine approach.

Han LY, Cai CZ, Lo SL, Chung MC, Chen YZ.

RNA. 2004 Mar;10(3):355-68.PMID: 14970381 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Safety and nutritional assessment of GM plants and derived food and feed: the role of animal feeding trials.

EFSA GMO Panel Working Group on Animal Feeding Trials.

Food Chem Toxicol. 2008 Mar;46 Suppl 1:S2-70. Epub 2008 Feb 13. Review.PMID: 18328408 [PubMed - indexed for MEDLINE]Related citations

Discovery and characterization of 91 novel transcripts expressed in cattle placenta.

Kumar CG, Larson JH, Band MR, Lewin HA.

BMC Genomics. 2007 May 9;8:113.PMID: 17488528 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Predicting protein linkages in bacteria: which method is best depends on task.

Karimpour-Fard A, Leach SM, Gill RT, Hunter LE.

BMC Bioinformatics. 2008 Sep 24;9:397.PMID: 18816389 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Ab initio and template-based prediction of multi-class distance maps by two-dimensional recursive neural networks.

Walsh I, Baù D, Martin AJ, Mooney C, Vullo A, Pollastri G.

BMC Struct Biol. 2009 Jan 30;9:5.PMID: 19183478 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Peanut gene expression profiling in developing seeds at different reproduction stages during Aspergillus parasiticus infection.

Guo B, Chen X, Dang P, Scully BT, Liang X, Holbrook CC, Yu J, Culbreath AK.

BMC Dev Biol. 2008 Feb 4;8:12.PMID: 18248674 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

De novo computational prediction of non-coding RNA genes in prokaryotic genomes.

Tran TT, Zhou F, Marshburn S, Stead M, Kushner SR, Xu Y.

Bioinformatics. 2009 Nov 15;25(22):2897-905. Epub 2009 Sep 10.PMID: 19744996 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Exploring dynamics of protein structure determination and homology-based prediction to estimate the number of superfamilies and folds.

Sadreyev RI, Grishin NV.

BMC Struct Biol. 2006 Mar 20;6:6.PMID: 16549009 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Compression-based classification of biological sequences and structures via the Universal Similarity Metric: experimental assessment.

Ferragina P, Giancarlo R, Greco V, Manzini G, Valiente G.

BMC Bioinformatics. 2007 Jul 13;8:252.PMID: 17629909 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Characterization and expression analyses of anti-apoptotic Bcl-2-like genes NR-13, Mcl-1, Bcl-X1, and Bcl-X2 in Atlantic cod (Gadus morhua).

Feng CY, Rise ML.

Mol Immunol. 2010 Jan;47(4):763-84. Epub 2009 Nov 17.PMID: 19923001 [PubMed - indexed for MEDLINE]Related citations

Learning to predict expression efficacy of vectors in recombinant protein production.

Chan WC, Liang PH, Shih YP, Yang UC, Lin WC, Hsu CN.

BMC Bioinformatics. 2010 Jan 18;11 Suppl 1:S21.PMID: 20122193 [PubMed - indexed for MEDLINE]Free ArticleRelated citations

Non-coding sequence retrieval system for comparative genomic analysis of gene regulatory elements.

Doh ST, Zhang Y, Temple MH, Cai L.

BMC Bioinformatics. 2007 Mar 15;8:94.PMID: 17362514 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Evaluating the protein coding potential of exonized transposable element sequences.

Piriyapongsa J, Rutledge MT, Patel S, Borodovsky M, Jordan IK.

Biol Direct. 2007 Nov 26;2:31.PMID: 18036258 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

Investigating an Artificial Immune System to strengthen protein structure prediction and protein coding region identification using the cellular automata classifier.

Sree PK, Babu IR, Devi NS.

Int J Bioinform Res Appl. 2009;5(6):647-62.PMID: 19887338 [PubMed - indexed for MEDLINE]Related citations

Identification of genes coding for B cell antigens of Mycoplasma mycoides subsp. mycoides Small Colony (MmmSC) by using phage display.

Miltiadou DR, Mather A, Vilei EM, Du Plessis DH.

BMC Microbiol. 2009 Oct 9;9:215.PMID: 19818124 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations