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Selection of Sphingomonadaceae at the base of Laccaria proxima and Russula exalbicans fruiting bodies.

Boersma FG, Warmink JA, Andreote FA, van Elsas JD.

Appl Environ Microbiol. 2009 Apr;75(7):1979-89. Epub 2009 Jan 30.PMID: 19181827 [PubMed - indexed for MEDLINE]Related articlesFree article

Universal and species-specific bacterial 'fungiphiles' in the mycospheres of different basidiomycetous fungi.

Warmink JA, Nazir R, van Elsas JD.

Environ Microbiol. 2009 Feb;11(2):300-12.PMID: 19196267 [PubMed - indexed for MEDLINE]Related articles

Selection of bacterial populations in the mycosphere of Laccaria proxima: is type III secretion involved?

Warmink JA, van Elsas JD.

ISME J. 2008 Aug;2(8):887-900. Epub 2008 Apr 17.PMID: 18421258 [PubMed - indexed for MEDLINE]Related articles

Analysis of the dynamics of fungal communities in soil via fungal-specific PCR of soil DNA followed by denaturing gradient gel electrophoresis.

van Elsas JD, Duarte GF, Keijzer-Wolters A, Smit E.

J Microbiol Methods. 2000 Dec 15;43(2):133-51.PMID: 11121612 [PubMed - indexed for MEDLINE]Related articles

Analysis of bacterial communities in soil by use of denaturing gradient gel electrophoresis and clone libraries, as influenced by different reverse primers.

Brons JK, van Elsas JD.

Appl Environ Microbiol. 2008 May;74(9):2717-27. Epub 2008 Feb 29.PMID: 18310425 [PubMed - indexed for MEDLINE]Related articlesFree article

Fruiting body and soil rDNA sampling detects complementary assemblage of Agaricomycotina (Basidiomycota, Fungi) in a hemlock-dominated forest plot in southern Ontario.

Porter TM, Skillman JE, Moncalvo JM.

Mol Ecol. 2008 Jul;17(13):3037-50. Epub 2008 May 20.PMID: 18494767 [PubMed - indexed for MEDLINE]Related articles

Analysis of a diverse assemblage of diazotrophic bacteria from Spartina alterniflora using DGGE and clone library screening.

Lovell CR, Decker PV, Bagwell CE, Thompson S, Matsui GY.

J Microbiol Methods. 2008 May;73(2):160-71. Epub 2008 Feb 19.PMID: 18400320 [PubMed - indexed for MEDLINE]Related articles

Flavobacterial community structure in a hardwater rivulet and adjacent forest soil, Harz Mountain, Germany.

Cousin S.

Curr Microbiol. 2009 May;58(5):409-15. Epub 2008 Nov 15.PMID: 19011940 [PubMed - indexed for MEDLINE]Related articles

Diversity of fungi in organic soils under a moorland--Scots pine (Pinus sylvestris L.) gradient.

Anderson IC, Campbell CD, Prosser JI.

Environ Microbiol. 2003 Nov;5(11):1121-32.PMID: 14641592 [PubMed - indexed for MEDLINE]Related articles

Soil microbial community analysis using two-dimensional polyacrylamide gel electrophoresis of the bacterial ribosomal internal transcribed spacer regions.

Jones CM, Thies JE.

J Microbiol Methods. 2007 May;69(2):256-67. Epub 2007 Jan 18.PMID: 17343936 [PubMed - indexed for MEDLINE]Related articles

Diversity of iron oxidizers in wetland soils revealed by novel 16S rRNA primers targeting Gallionella-related bacteria.

Wang J, Muyzer G, Bodelier PL, Laanbroek HJ.

ISME J. 2009 Jun;3(6):715-25. Epub 2009 Feb 19.PMID: 19225553 [PubMed - indexed for MEDLINE]Related articles

Analysis of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA as well as DNA fragments coding for 16S rRNA.

Duineveld BM, Kowalchuk GA, Keijzer A, van Elsas JD, van Veen JA.

Appl Environ Microbiol. 2001 Jan;67(1):172-8.PMID: 11133442 [PubMed - indexed for MEDLINE]Related articlesFree article

Acinetobacter diversity in environmental samples assessed by 16S rRNA gene PCR-DGGE fingerprinting.

Vanbroekhoven K, Ryngaert A, Wattiau P, Mot R, Springael D.

FEMS Microbiol Ecol. 2004 Oct 1;50(1):37-50.PMID: 19712375 [PubMed - indexed for MEDLINE]Related articles

Changes in developing plant microbial community structure as affected by contaminated water.

Ibekwe AM, Grieve CM.

FEMS Microbiol Ecol. 2004 May 1;48(2):239-48.PMID: 19712407 [PubMed - indexed for MEDLINE]Related articles

[Analysis of bacterial diversity of kefir grains by denaturing gradient gel electrophoresis and 16S rDNA sequencing]

Wang YY, Li HR, Jia SF, Wu ZJ, Guo BH.

Wei Sheng Wu Xue Bao. 2006 Apr;46(2):310-3. Chinese. PMID: 16736598 [PubMed - indexed for MEDLINE]Related articles

Assessment of bacterial community structure in soil by polymerase chain reaction and denaturing gradient gel electrophoresis.

Gelsomino A, Keijzer-Wolters AC, Cacco G, van Elsas JD.

J Microbiol Methods. 1999 Oct;38(1-2):1-15.PMID: 10520580 [PubMed - indexed for MEDLINE]Related articles

Bacterial diversity in the rhizosphere of Proteaceae species.

Stafford WH, Baker GC, Brown SA, Burton SG, Cowan DA.

Environ Microbiol. 2005 Nov;7(11):1755-68.PMID: 16232290 [PubMed - indexed for MEDLINE]Related articles

A ribosomal RNA gene intergenic spacer based PCR and DGGE fingerprinting method for the analysis of specific rhizobial communities in soil.

de Oliveira VM, Manfio GP, da Costa Coutinho HL, Keijzer-Wolters AC, van Elsas JD.

J Microbiol Methods. 2006 Mar;64(3):366-79. Epub 2005 Jul 12.PMID: 16014316 [PubMed - indexed for MEDLINE]Related articles

Analysis of fungal diversity in the wheat rhizosphere by sequencing of cloned PCR-amplified genes encoding 18S rRNA and temperature gradient gel electrophoresis.

Smit E, Leeflang P, Glandorf B, van Elsas JD, Wernars K.

Appl Environ Microbiol. 1999 Jun;65(6):2614-21.PMID: 10347051 [PubMed - indexed for MEDLINE]Related articlesFree article

Development and application of a PCR-denaturing gradient gel electrophoresis tool to study the diversity of Nitrobacter-like nxrA sequences in soil.

Wertz S, Poly F, Le Roux X, Degrange V.

FEMS Microbiol Ecol. 2008 Feb;63(2):261-71.PMID: 18199085 [PubMed - indexed for MEDLINE]Related articles