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    Results: 1 to 20 of 124

    1.

    Identifying differential exon splicing using linear models and correlation coefficients.

    Shah SH, Pallas JA.

    BMC Bioinformatics. 2009 Jan 20;10:26.PMID: 19154578 [PubMed - indexed for MEDLINE]Related articlesFree article

    2.

    Gene expression and isoform variation analysis using Affymetrix Exon Arrays.

    Bemmo A, Benovoy D, Kwan T, Gaffney DJ, Jensen RV, Majewski J.

    BMC Genomics. 2008 Nov 7;9:529. Erratum in: BMC Genomics. 2009 Mar 23;10. doi: 10.1186/1471-2164-10-121. PMID: 18990248 [PubMed - indexed for MEDLINE]Related articlesFree article

    3.

    A statistical method for predicting splice variants between two groups of samples using GeneChip expression array data.

    Fan W, Khalid N, Hallahan AR, Olson JM, Zhao LP.

    Theor Biol Med Model. 2006 Apr 7;3:19.PMID: 16603076 [PubMed - indexed for MEDLINE]Related articlesFree article

    4.

    Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array.

    Gardina PJ, Clark TA, Shimada B, Staples MK, Yang Q, Veitch J, Schweitzer A, Awad T, Sugnet C, Dee S, Davies C, Williams A, Turpaz Y.

    BMC Genomics. 2006 Dec 27;7:325.PMID: 17192196 [PubMed - indexed for MEDLINE]Related articlesFree article

    5.

    RASE: recognition of alternatively spliced exons in C.elegans.

    Rätsch G, Sonnenburg S, Schölkopf B.

    Bioinformatics. 2005 Jun;21 Suppl 1:i369-77.PMID: 15961480 [PubMed - indexed for MEDLINE]Related articlesFree article

    6.

    REMAS: a new regression model to identify alternative splicing events from exon array data.

    Zheng H, Hang X, Zhu J, Qian M, Qu W, Zhang C, Deng M.

    BMC Bioinformatics. 2009 Jan 30;10 Suppl 1:S18.PMID: 19208117 [PubMed - indexed for MEDLINE]Related articlesFree article

    7.

    Discovery of tissue-specific exons using comprehensive human exon microarrays.

    Clark TA, Schweitzer AC, Chen TX, Staples MK, Lu G, Wang H, Williams A, Blume JE.

    Genome Biol. 2007;8(4):R64.PMID: 17456239 [PubMed - indexed for MEDLINE]Related articlesFree article

    8.

    Comparison of Affymetrix Gene Array with the Exon Array shows potential application for detection of transcript isoform variation.

    Ha KCh, Coulombe-Huntington J, Majewski J.

    BMC Genomics. 2009 Nov 12;10:519.PMID: 19909511 [PubMed - in process]Related articlesFree article

    9.

    Alternative RNA splicing generates diversity of neuropeptide expression in the brain of the snail Lymnaea: in situ analysis of mutually exclusive transcripts of the FMRFamide gene.

    Santama N, Benjamin PR, Burke JF.

    Eur J Neurosci. 1995 Jan 1;7(1):65-76.PMID: 7711938 [PubMed - indexed for MEDLINE]Related articles

    10.

    Differential splicing using whole-transcript microarrays.

    Robinson MD, Speed TP.

    BMC Bioinformatics. 2009 May 22;10:156.PMID: 19463149 [PubMed - indexed for MEDLINE]Related articlesFree article

    11.

    Dissecting an alternative splicing analysis workflow for GeneChip Exon 1.0 ST Affymetrix arrays.

    Della Beffa C, Cordero F, Calogero RA.

    BMC Genomics. 2008 Nov 28;9:571.PMID: 19040723 [PubMed - indexed for MEDLINE]Related articlesFree article

    12.

    A statistical framework for genome-wide discovery of biomarker splice variations with GeneChip Human Exon 1.0 ST Arrays.

    Yoshida R, Numata K, Imoto S, Nagasaki M, Doi A, Ueno K, Miyano S.

    Genome Inform. 2006;17(1):88-99.PMID: 17503359 [PubMed - indexed for MEDLINE]Related articles

    13.

    Transcription and splicing regulation in human umbilical vein endothelial cells under hypoxic stress conditions by exon array.

    Hang X, Li P, Li Z, Qu W, Yu Y, Li H, Shen Z, Zheng H, Gao Y, Wu Y, Deng M, Sun Z, Zhang C.

    BMC Genomics. 2009 Mar 25;10:126.PMID: 19320972 [PubMed - indexed for MEDLINE]Related articlesFree article

    14.

    Comprehensive splicing graph analysis of alternative splicing patterns in chicken, compared to human and mouse.

    Chacko E, Ranganathan S.

    BMC Genomics. 2009 Jul 7;10 Suppl 1:S5.PMID: 19594882 [PubMed - indexed for MEDLINE]Related articlesFree article

    15.

    MADS: a new and improved method for analysis of differential alternative splicing by exon-tiling microarrays.

    Xing Y, Stoilov P, Kapur K, Han A, Jiang H, Shen S, Black DL, Wong WH.

    RNA. 2008 Aug;14(8):1470-9. Epub 2008 Jun 19.PMID: 18566192 [PubMed - indexed for MEDLINE]Related articlesFree article

    16.

    Studying alternative splicing regulatory networks through partial correlation analysis.

    Chen L, Zheng S.

    Genome Biol. 2009;10(1):R3. Epub 2009 Jan 9.PMID: 19133160 [PubMed - indexed for MEDLINE]Related articlesFree article

    17.

    Exon and junction microarrays detect widespread mouse strain- and sex-bias expression differences.

    Su WL, Modrek B, GuhaThakurta D, Edwards S, Shah JK, Kulkarni AV, Russell A, Schadt EE, Johnson JM, Castle JC.

    BMC Genomics. 2008 Jun 4;9:273.PMID: 18533039 [PubMed - indexed for MEDLINE]Related articlesFree article

    18.

    Selection of splice sites in pre-mRNAs with short internal exons.

    Dominski Z, Kole R.

    Mol Cell Biol. 1991 Dec;11(12):6075-83.PMID: 1944277 [PubMed - indexed for MEDLINE]Related articlesFree article

    19.

    Splicy: a web-based tool for the prediction of possible alternative splicing events from Affymetrix probeset data.

    Rambaldi D, Felice B, Praz V, Bucher P, Cittaro D, Guffanti A.

    BMC Bioinformatics. 2007 Mar 8;8 Suppl 1:S17.PMID: 17430561 [PubMed - indexed for MEDLINE]Related articlesFree article

    20.

    Overestimation of alternative splicing caused by variable probe characteristics in exon arrays.

    Gaidatzis D, Jacobeit K, Oakeley EJ, Stadler MB.

    Nucleic Acids Res. 2009 Sep;37(16):e107. Epub 2009 Jun 15.PMID: 19528075 [PubMed - indexed for MEDLINE]Related articlesFree article

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