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    Results: 1 to 20 of 202

    1.

    MegaSNPHunter: a learning approach to detect disease predisposition SNPs and high level interactions in genome wide association study.

    Wan X, Yang C, Yang Q, Xue H, Tang NL, Yu W.

    BMC Bioinformatics. 2009 Jan 9;10:13.PMID: 19134182 [PubMed - indexed for MEDLINE]Related articlesFree article

    2.

    SNPHarvester: a filtering-based approach for detecting epistatic interactions in genome-wide association studies.

    Yang C, He Z, Wan X, Yang Q, Xue H, Yu W.

    Bioinformatics. 2009 Feb 15;25(4):504-11. Epub 2008 Dec 19.PMID: 19098029 [PubMed - indexed for MEDLINE]Related articles

    3.

    A random forest approach to the detection of epistatic interactions in case-control studies.

    Jiang R, Tang W, Wu X, Fu W.

    BMC Bioinformatics. 2009 Jan 30;10 Suppl 1:S65.PMID: 19208169 [PubMed - indexed for MEDLINE]Related articlesFree article

    4.

    Detecting purely epistatic multi-locus interactions by an omnibus permutation test on ensembles of two-locus analyses.

    Wongseree W, Assawamakin A, Piroonratana T, Sinsomros S, Limwongse C, Chaiyaratana N.

    BMC Bioinformatics. 2009 Sep 17;10:294.PMID: 19761607 [PubMed - in process]Related articlesFree article

    5.

    Genome-wide association study of rheumatoid arthritis in the Spanish population: KLF12 as a risk locus for rheumatoid arthritis susceptibility.

    Julià A, Ballina J, Cañete JD, Balsa A, Tornero-Molina J, Naranjo A, Alperi-López M, Erra A, Pascual-Salcedo D, Barceló P, Camps J, Marsal S.

    Arthritis Rheum. 2008 Aug;58(8):2275-86. Erratum in: Arthritis Rheum. 2008 Oct;58(10):3276. PMID: 18668548 [PubMed - indexed for MEDLINE]Related articlesFree article

    6.

    Biofilter: a knowledge-integration system for the multi-locus analysis of genome-wide association studies.

    Bush WS, Dudek SM, Ritchie MD.

    Pac Symp Biocomput. 2009:368-79.PMID: 19209715 [PubMed - indexed for MEDLINE]Related articlesFree article

    7.

    Simultaneous analysis of all SNPs in genome-wide and re-sequencing association studies.

    Hoggart CJ, Whittaker JC, De Iorio M, Balding DJ.

    PLoS Genet. 2008 Jul 25;4(7):e1000130.PMID: 18654633 [PubMed - indexed for MEDLINE]Related articlesFree article

    8.

    Using genome-wide pathway analysis to unravel the etiology of complex diseases.

    Elbers CC, van Eijk KR, Franke L, Mulder F, van der Schouw YT, Wijmenga C, Onland-Moret NC.

    Genet Epidemiol. 2009 Jul;33(5):419-31.PMID: 19235186 [PubMed - indexed for MEDLINE]Related articles

    9.

    Detection of disease-associated deletions in case-control studies using SNP genotypes with application to rheumatoid arthritis.

    Wu CC, Shete S, Chen WV, Peng B, Lee AT, Ma J, Gregersen PK, Amos CI.

    Hum Genet. 2009 Aug;126(2):303-15. Epub 2009 May 5.PMID: 19415332 [PubMed - indexed for MEDLINE]Related articles

    10.

    Identifying disease associations via genome-wide association studies.

    Huang W, Wang P, Liu Z, Zhang L.

    BMC Bioinformatics. 2009 Jan 30;10 Suppl 1:S68.PMID: 19208172 [PubMed - indexed for MEDLINE]Related articlesFree article

    11.

    A method for detecting epistasis in genome-wide studies using case-control multi-locus association analysis.

    Gayán J, González-Pérez A, Bermudo F, Sáez ME, Royo JL, Quintas A, Galan JJ, Morón FJ, Ramirez-Lorca R, Real LM, Ruiz A.

    BMC Genomics. 2008 Jul 31;9:360.PMID: 18667089 [PubMed - indexed for MEDLINE]Related articlesFree article

    12.

    Two independent alleles at 6q23 associated with risk of rheumatoid arthritis.

    Plenge RM, Cotsapas C, Davies L, Price AL, de Bakker PI, Maller J, Pe'er I, Burtt NP, Blumenstiel B, DeFelice M, Parkin M, Barry R, Winslow W, Healy C, Graham RR, Neale BM, Izmailova E, Roubenoff R, Parker AN, Glass R, Karlson EW, Maher N, Hafler DA, Lee DM, Seldin MF, Remmers EF, Lee AT, Padyukov L, Alfredsson L, Coblyn J, Weinblatt ME, Gabriel SB, Purcell S, Klareskog L, Gregersen PK, Shadick NA, Daly MJ, Altshuler D.

    Nat Genet. 2007 Dec;39(12):1477-82. Epub 2007 Nov 4.PMID: 17982456 [PubMed - indexed for MEDLINE]Related articlesFree article

    13.

    Identification of a novel susceptibility locus for juvenile idiopathic arthritis by genome-wide association analysis.

    Hinks A, Barton A, Shephard N, Eyre S, Bowes J, Cargill M, Wang E, Ke X, Kennedy GC, John S, Worthington J, Thomson W; British Society of Paediatric and Adolescent Rheumatology Study Group.

    Arthritis Rheum. 2009 Jan;60(1):258-63.PMID: 19116933 [PubMed - indexed for MEDLINE]Related articles

    14.

    Capturing the spectrum of interaction effects in genetic association studies by simulated evaporative cooling network analysis.

    McKinney BA, Crowe JE, Guo J, Tian D.

    PLoS Genet. 2009 Mar;5(3):e1000432. Epub 2009 Mar 20.PMID: 19300503 [PubMed - indexed for MEDLINE]Related articlesFree article

    15.

    A Classifier-based approach to identify genetic similarities between diseases.

    Schaub MA, Kaplow IM, Sirota M, Do CB, Butte AJ, Batzoglou S.

    Bioinformatics. 2009 Jun 15;25(12):i21-9.PMID: 19477990 [PubMed - indexed for MEDLINE]Related articlesFree article

    16.

    Establishing an adjusted p-value threshold to control the family-wide type 1 error in genome wide association studies.

    Duggal P, Gillanders EM, Holmes TN, Bailey-Wilson JE.

    BMC Genomics. 2008 Oct 31;9:516.PMID: 18976480 [PubMed - indexed for MEDLINE]Related articlesFree article

    17.

    SNiPer: improved SNP genotype calling for Affymetrix 10K GeneChip microarray data.

    Huentelman MJ, Craig DW, Shieh AD, Corneveaux JJ, Hu-Lince D, Pearson JV, Stephan DA.

    BMC Genomics. 2005 Oct 31;6:149.PMID: 16262895 [PubMed - indexed for MEDLINE]Related articlesFree article

    18.

    Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples.

    Hong H, Su Z, Ge W, Shi L, Perkins R, Fang H, Xu J, Chen JJ, Han T, Kaput J, Fuscoe JC, Tong W.

    BMC Bioinformatics. 2008 Aug 12;9 Suppl 9:S17.PMID: 18793462 [PubMed - indexed for MEDLINE]Related articlesFree article

    19.

    Predictive rule inference for epistatic interaction detection in genome-wide association studies.

    Wan X, Yang C, Yang Q, Xue H, Tang NL, Yu W.

    Bioinformatics. 2009 Oct 30. [Epub ahead of print]PMID: 19880365 [PubMed - as supplied by publisher]Related articles

    20.

    Evaluating the ability of tree-based methods and logistic regression for the detection of SNP-SNP interaction.

    García-Magariños M, López-de-Ullibarri I, Cao R, Salas A.

    Ann Hum Genet. 2009 May;73(Pt 3):360-9. Epub 2009 Mar 8.PMID: 19291098 [PubMed - indexed for MEDLINE]Related articles

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