PubMed

Complex nature of SNP genotype effects on gene expression in primary human leucocytes.

Heap GA, Trynka G, Jansen RC, Bruinenberg M, Swertz MA, Dinesen LC, Hunt KA, Wijmenga C, Vanheel DA, Franke L.

BMC Med Genomics. 2009 Jan 7;2:1.PMID: 19128478 [PubMed - in process]Related articlesFree article

Genome-wide co-expression analysis in multiple tissues.

Grieve IC, Dickens NJ, Pravenec M, Kren V, Hubner N, Cook SA, Aitman TJ, Petretto E, Mangion J.

PLoS One. 2008;3(12):e4033. Epub 2008 Dec 29.PMID: 19112506 [PubMed - indexed for MEDLINE]Related articlesFree article

Cis-regulatory variations: a study of SNPs around genes showing cis-linkage in segregating mouse populations.

GuhaThakurta D, Xie T, Anand M, Edwards SW, Li G, Wang SS, Schadt EE.

BMC Genomics. 2006 Sep 15;7:235.PMID: 16978413 [PubMed - indexed for MEDLINE]Related articlesFree article

eQTL analysis in humans.

Franke L, Jansen RC.

Methods Mol Biol. 2009;573:311-28.PMID: 19763935 [PubMed - in process]Related articles

Mapping the genetic architecture of gene expression in human liver.

Schadt EE, Molony C, Chudin E, Hao K, Yang X, Lum PY, Kasarskis A, Zhang B, Wang S, Suver C, Zhu J, Millstein J, Sieberts S, Lamb J, GuhaThakurta D, Derry J, Storey JD, Avila-Campillo I, Kruger MJ, Johnson JM, Rohl CA, van Nas A, Mehrabian M, Drake TA, Lusis AJ, Smith RC, Guengerich FP, Strom SC, Schuetz E, Rushmore TH, Ulrich R.

PLoS Biol. 2008 May 6;6(5):e107.PMID: 18462017 [PubMed - indexed for MEDLINE]Related articlesFree article

Integration of HapMap-based SNP pattern analysis and gene expression profiling reveals common SNP profiles for cancer therapy outcome predictor genes.

Glinsky GV.

Cell Cycle. 2006 Nov;5(22):2613-25. Epub 2006 Nov 15.PMID: 17172834 [PubMed - indexed for MEDLINE]Related articles

Heritability and tissue specificity of expression quantitative trait loci.

Petretto E, Mangion J, Dickens NJ, Cook SA, Kumaran MK, Lu H, Fischer J, Maatz H, Kren V, Pravenec M, Hubner N, Aitman TJ.

PLoS Genet. 2006 Oct 20;2(10):e172. Epub 2006 Aug 28.PMID: 17054398 [PubMed - indexed for MEDLINE]Related articlesFree article

Validating discovered Cis-acting regulatory genetic variants: application of an allele specific expression approach to HapMap populations.

Campino S, Forton J, Raj S, Mohr B, Auburn S, Fry A, Mangano VD, Vandiedonck C, Richardson A, Rockett K, Clark TG, Kwiatkowski DP.

PLoS One. 2008;3(12):e4105. Epub 2008 Dec 31.PMID: 19116668 [PubMed - indexed for MEDLINE]Related articlesFree article

A genome-wide association study identifies protein quantitative trait loci (pQTLs).

Melzer D, Perry JR, Hernandez D, Corsi AM, Stevens K, Rafferty I, Lauretani F, Murray A, Gibbs JR, Paolisso G, Rafiq S, Simon-Sanchez J, Lango H, Scholz S, Weedon MN, Arepalli S, Rice N, Washecka N, Hurst A, Britton A, Henley W, van de Leemput J, Li R, Newman AB, Tranah G, Harris T, Panicker V, Dayan C, Bennett A, McCarthy MI, Ruokonen A, Jarvelin MR, Guralnik J, Bandinelli S, Frayling TM, Singleton A, Ferrucci L.

PLoS Genet. 2008 May 9;4(5):e1000072.PMID: 18464913 [PubMed - indexed for MEDLINE]Related articlesFree article

Common regulatory variation impacts gene expression in a cell type-dependent manner.

Dimas AS, Deutsch S, Stranger BE, Montgomery SB, Borel C, Attar-Cohen H, Ingle C, Beazley C, Gutierrez Arcelus M, Sekowska M, Gagnebin M, Nisbett J, Deloukas P, Dermitzakis ET, Antonarakis SE.

Science. 2009 Sep 4;325(5945):1246-50. Epub 2009 Jul 30.PMID: 19644074 [PubMed - indexed for MEDLINE]Related articles

Expression quantitative trait loci detected in cell lines are often present in primary tissues.

Bullaughey K, Chavarria CI, Coop G, Gilad Y.

Hum Mol Genet. 2009 Nov 15;18(22):4296-303. Epub 2009 Aug 11.PMID: 19671653 [PubMed - in process]Related articles

SNPs in Multi-species Conserved Sequences (MCS) as useful markers in association studies: a practical approach.

McCauley JL, Kenealy SJ, Margulies EH, Schnetz-Boutaud N, Gregory SG, Hauser SL, Oksenberg JR, Pericak-Vance MA, Haines JL, Mortlock DP.

BMC Genomics. 2007 Aug 6;8:266.PMID: 17683615 [PubMed - indexed for MEDLINE]Related articlesFree article

Modifier effects between regulatory and protein-coding variation.

Dimas AS, Stranger BE, Beazley C, Finn RD, Ingle CE, Forrest MS, Ritchie ME, Deloukas P, Tavaré S, Dermitzakis ET.

PLoS Genet. 2008 Oct;4(10):e1000244. Epub 2008 Oct 31.PMID: 18974877 [PubMed - indexed for MEDLINE]Related articlesFree article

Genome-wide associations of gene expression variation in humans.

Stranger BE, Forrest MS, Clark AG, Minichiello MJ, Deutsch S, Lyle R, Hunt S, Kahl B, Antonarakis SE, Tavaré S, Deloukas P, Dermitzakis ET.

PLoS Genet. 2005 Dec;1(6):e78. Epub 2005 Dec 16.PMID: 16362079 [PubMed - indexed for MEDLINE]Related articlesFree article

Genetic variants of Complex I in multiple sclerosis.

Vyshkina T, Banisor I, Shugart YY, Leist TP, Kalman B.

J Neurol Sci. 2005 Jan 15;228(1):55-64.PMID: 15607211 [PubMed - indexed for MEDLINE]Related articles

Ionizing radiation and genetic risks. VI. Chronic multifactorial diseases: a review of epidemiological and genetical aspects of coronary heart disease, essential hypertension and diabetes mellitus.

Sankaranarayanan K, Chakraborty R, Boerwinkle EA.

Mutat Res. 1999 Jan;436(1):21-57. Review.PMID: 9878681 [PubMed - indexed for MEDLINE]Related articles

Gene expression variation and expression quantitative trait mapping of human chromosome 21 genes.

Deutsch S, Lyle R, Dermitzakis ET, Attar H, Subrahmanyan L, Gehrig C, Parand L, Gagnebin M, Rougemont J, Jongeneel CV, Antonarakis SE.

Hum Mol Genet. 2005 Dec 1;14(23):3741-9. Epub 2005 Oct 26.PMID: 16251198 [PubMed - indexed for MEDLINE]Related articlesFree article

[Genetic factors in myocardial infarction--Results from a candidate gene and a genome-wide approach between beta blockers]

Hengstenberg C, Bröckel U, Holmer S, Mayer B, Fischer M, Baessler A, Erdmann J, Lieb W, Löwel H, Riegger G, Schunkert H.

Herz. 2002 Nov;27(7):649-61. German. Erratum in: Herz. 2003 May;28(3):266. PMID: 12439636 [PubMed - indexed for MEDLINE]Related articles

Rationale and study design of the CardioGene Study: genomics of in-stent restenosis.

Ganesh SK, Skelding KA, Mehta L, O'Neill K, Joo J, Zheng G, Goldstein J, Simari R, Billings E, Geller NL, Holmes D, O'Neill WW, Nabel EG.

Pharmacogenomics. 2004 Oct;5(7):952-1004.PMID: 15469413 [PubMed - indexed for MEDLINE]Related articles

Cross-platform comparison and visualisation of gene expression data using co-inertia analysis.

Culhane AC, Perrière G, Higgins DG.

BMC Bioinformatics. 2003 Nov 21;4:59.PMID: 14633289 [PubMed - indexed for MEDLINE]Related articlesFree article