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    Results: 1 to 20 of 92

    1.

    Towards structured output prediction of enzyme function.

    Astikainen K, Holm L, Pitkänen E, Szedmak S, Rousu J.

    BMC Proc. 2008 Dec 17;2 Suppl 4:S2.PMID: 19091049 [PubMed - in process]Related articlesFree article

    2.

    SVM-Fold: a tool for discriminative multi-class protein fold and superfamily recognition.

    Melvin I, Ie E, Kuang R, Weston J, Stafford WN, Leslie C.

    BMC Bioinformatics. 2007 May 22;8 Suppl 4:S2.PMID: 17570145 [PubMed - indexed for MEDLINE]Related articlesFree article

    3.

    Mismatch string kernels for discriminative protein classification.

    Leslie CS, Eskin E, Cohen A, Weston J, Noble WS.

    Bioinformatics. 2004 Mar 1;20(4):467-76. Epub 2004 Jan 22.PMID: 14990442 [PubMed - indexed for MEDLINE]Related articlesFree article

    4.

    SCPRED: accurate prediction of protein structural class for sequences of twilight-zone similarity with predicting sequences.

    Kurgan L, Cios K, Chen K.

    BMC Bioinformatics. 2008 May 1;9:226.PMID: 18452616 [PubMed - indexed for MEDLINE]Related articlesFree article

    5.

    Efficiency analysis of KNN and minimum distance-based classifiers in enzyme family prediction.

    Nasibov E, Kandemir-Cavas C.

    Comput Biol Chem. 2009 Sep 28. [Epub ahead of print]PMID: 19853514 [PubMed - as supplied by publisher]Related articles

    6.

    A regression-based K nearest neighbor algorithm for gene function prediction from heterogeneous data.

    Yao Z, Ruzzo WL.

    BMC Bioinformatics. 2006 Mar 20;7 Suppl 1:S11.PMID: 16723004 [PubMed - indexed for MEDLINE]Related articlesFree article

    7.

    A simplified approach to disulfide connectivity prediction from protein sequences.

    Vincent M, Passerini A, Labbé M, Frasconi P.

    BMC Bioinformatics. 2008 Jan 14;9:20.PMID: 18194539 [PubMed - indexed for MEDLINE]Related articlesFree article

    8.

    Computational identification of ubiquitylation sites from protein sequences.

    Tung CW, Ho SY.

    BMC Bioinformatics. 2008 Jul 15;9:310.PMID: 18625080 [PubMed - indexed for MEDLINE]Related articlesFree article

    9.

    OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy.

    Raghava GP, Searle SM, Audley PC, Barber JD, Barton GJ.

    BMC Bioinformatics. 2003 Oct 10;4:47.PMID: 14552658 [PubMed - indexed for MEDLINE]Related articlesFree article

    10.

    Enhanced protein fold recognition through a novel data integration approach.

    Ying Y, Huang K, Campbell C.

    BMC Bioinformatics. 2009 Aug 26;10:267.PMID: 19709406 [PubMed - in process]Related articlesFree article

    11.

    Graph wavelet alignment kernels for drug virtual screening.

    Smalter A, Huan J, Lushington G.

    Comput Syst Bioinformatics Conf. 2008;7:327-38.PMID: 19642292 [PubMed - indexed for MEDLINE]Related articles

    12.

    Prediction of enzyme classification from protein sequence without the use of sequence similarity.

    des Jardins M, Karp PD, Krummenacker M, Lee TJ, Ouzounis CA.

    Proc Int Conf Intell Syst Mol Biol. 1997;5:92-9.PMID: 9322021 [PubMed - indexed for MEDLINE]Related articles

    13.

    Kernel-imbedded Gaussian processes for disease classification using microarray gene expression data.

    Zhao X, Cheung LW.

    BMC Bioinformatics. 2007 Feb 28;8:67.PMID: 17328811 [PubMed - indexed for MEDLINE]Related articlesFree article

    14.

    Evaluation of different biological data and computational classification methods for use in protein interaction prediction.

    Qi Y, Bar-Joseph Z, Klein-Seetharaman J.

    Proteins. 2006 May 15;63(3):490-500.PMID: 16450363 [PubMed - indexed for MEDLINE]Related articles

    15.

    PepDist: a new framework for protein-peptide binding prediction based on learning peptide distance functions.

    Hertz T, Yanover C.

    BMC Bioinformatics. 2006 Mar 20;7 Suppl 1:S3.PMID: 16723006 [PubMed - indexed for MEDLINE]Related articlesFree article

    16.

    Protein disorder prediction by condensed PSSM considering propensity for order or disorder.

    Su CT, Chen CY, Ou YY.

    BMC Bioinformatics. 2006 Jun 23;7:319.PMID: 16796745 [PubMed - indexed for MEDLINE]Related articlesFree article

    17.

    Accurate prediction of enzyme subfamily class using an adaptive fuzzy k-nearest neighbor method.

    Huang WL, Chen HM, Hwang SF, Ho SY.

    Biosystems. 2007 Sep-Oct;90(2):405-13. Epub 2006 Oct 26.PMID: 17140725 [PubMed - indexed for MEDLINE]Related articles

    18.

    Using Nearest Feature Line and Tunable Nearest Neighbor methods for prediction of protein subcellular locations.

    Gao QB, Wang ZZ.

    Comput Biol Chem. 2005 Oct;29(5):388-92. Epub 2005 Oct 5.PMID: 16213794 [PubMed - indexed for MEDLINE]Related articles

    19.

    Statistical evaluation of local alignment features predicting allergenicity using supervised classification algorithms.

    Soeria-Atmadja D, Zorzet A, Gustafsson MG, Hammerling U.

    Int Arch Allergy Immunol. 2004 Feb;133(2):101-12. Epub 2004 Jan 21.PMID: 14739578 [PubMed - indexed for MEDLINE]Related articles

    20.

    Predicting enzyme class from protein structure without alignments.

    Dobson PD, Doig AJ.

    J Mol Biol. 2005 Jan 7;345(1):187-99.PMID: 15567421 [PubMed - indexed for MEDLINE]Related articles

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