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    Results: 1 to 20 of 482

    1.

    Genome-wide SNP genotyping highlights the role of natural selection in Plasmodium falciparum population divergence.

    Neafsey DE, Schaffner SF, Volkman SK, Park D, Montgomery P, Milner DA Jr, Lukens A, Rosen D, Daniels R, Houde N, Cortese JF, Tyndall E, Gates C, Stange-Thomann N, Sarr O, Ndiaye D, Ndir O, Mboup S, Ferreira MU, Moraes Sdo L, Dash AP, Chitnis CE, Wiegand RC, Hartl DL, Birren BW, Lander ES, Sabeti PC, Wirth DF.

    Genome Biol. 2008;9(12):R171. Epub 2008 Dec 15.

    PMID:
    19077304
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Single-nucleotide polymorphism, linkage disequilibrium and geographic structure in the malaria parasite Plasmodium vivax: prospects for genome-wide association studies.

    Orjuela-Sánchez P, Karunaweera ND, da Silva-Nunes M, da Silva NS, Scopel KK, Gonçalves RM, Amaratunga C, Sá JM, Socheat D, Fairhust RM, Gunawardena S, Thavakodirasah T, Galapaththy GL, Abeysinghe R, Kawamoto F, Wirth DF, Ferreira MU.

    BMC Genet. 2010 Jul 13;11:65.

    PMID:
    20626846
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    A genome-wide map of diversity in Plasmodium falciparum.

    Volkman SK, Sabeti PC, DeCaprio D, Neafsey DE, Schaffner SF, Milner DA Jr, Daily JP, Sarr O, Ndiaye D, Ndir O, Mboup S, Duraisingh MT, Lukens A, Derr A, Stange-Thomann N, Waggoner S, Onofrio R, Ziaugra L, Mauceli E, Gnerre S, Jaffe DB, Zainoun J, Wiegand RC, Birren BW, Hartl DL, Galagan JE, Lander ES, Wirth DF.

    Nat Genet. 2007 Jan;39(1):113-9. Epub 2006 Dec 10.

    PMID:
    17159979
    [PubMed - indexed for MEDLINE]
    4.

    Geographical distribution of selected and putatively neutral SNPs in Southeast Asian malaria parasites.

    Anderson TJ, Nair S, Sudimack D, Williams JT, Mayxay M, Newton PN, Guthmann JP, Smithuis FM, Tran TH, van den Broek IV, White NJ, Nosten F.

    Mol Biol Evol. 2005 Dec;22(12):2362-74. Epub 2005 Aug 10.

    PMID:
    16093566
    [PubMed - indexed for MEDLINE]
    Free Article
    5.

    Population genetic analysis of Plasmodium falciparum parasites using a customized Illumina GoldenGate genotyping assay.

    Campino S, Auburn S, Kivinen K, Zongo I, Ouedraogo JB, Mangano V, Djimde A, Doumbo OK, Kiara SM, Nzila A, Borrmann S, Marsh K, Michon P, Mueller I, Siba P, Jiang H, Su XZ, Amaratunga C, Socheat D, Fairhurst RM, Imwong M, Anderson T, Nosten F, White NJ, Gwilliam R, Deloukas P, MacInnis B, Newbold CI, Rockett K, Clark TG, Kwiatkowski DP.

    PLoS One. 2011;6(6):e20251. Epub 2011 Jun 6.

    PMID:
    21673999
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Detection of genome-wide polymorphisms in the AT-rich Plasmodium falciparum genome using a high-density microarray.

    Jiang H, Yi M, Mu J, Zhang L, Ivens A, Klimczak LJ, Huyen Y, Stephens RM, Su XZ.

    BMC Genomics. 2008 Aug 25;9:398.

    PMID:
    18724869
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Genetic diversity and population structure of Plasmodium falciparum in Thailand, a low transmission country.

    Pumpaibool T, Arnathau C, Durand P, Kanchanakhan N, Siripoon N, Suegorn A, Sitthi-Amorn C, Renaud F, Harnyuttanakorn P.

    Malar J. 2009 Jul 14;8:155.

    PMID:
    19602241
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Microsatellite markers reveal a spectrum of population structures in the malaria parasite Plasmodium falciparum.

    Anderson TJ, Haubold B, Williams JT, Estrada-Franco JG, Richardson L, Mollinedo R, Bockarie M, Mokili J, Mharakurwa S, French N, Whitworth J, Velez ID, Brockman AH, Nosten F, Ferreira MU, Day KP.

    Mol Biol Evol. 2000 Oct;17(10):1467-82.

    PMID:
    11018154
    [PubMed - indexed for MEDLINE]
    Free Article
    9.

    New generation pharmacogenomic tools: a SNP linkage disequilibrium Map, validated SNP assay resource, and high-throughput instrumentation system for large-scale genetic studies.

    De La Vega FM, Dailey D, Ziegle J, Williams J, Madden D, Gilbert DA.

    Biotechniques. 2002 Jun;Suppl:48-50, 52, 54.

    PMID:
    12083398
    [PubMed - indexed for MEDLINE]
    10.

    Population genetics and dynamics of Plasmodium falciparum: an ecological view.

    Day KP, Koella JC, Nee S, Gupta S, Read AF.

    Parasitology. 1992;104 Suppl:S35-52. Review.

    PMID:
    1589299
    [PubMed - indexed for MEDLINE]
    11.

    Plasmodium falciparum genome-wide scans for positive selection, recombination hot spots and resistance to antimalarial drugs.

    Mu J, Myers RA, Jiang H, Liu S, Ricklefs S, Waisberg M, Chotivanich K, Wilairatana P, Krudsood S, White NJ, Udomsangpetch R, Cui L, Ho M, Ou F, Li H, Song J, Li G, Wang X, Seila S, Sokunthea S, Socheat D, Sturdevant DE, Porcella SF, Fairhurst RM, Wellems TE, Awadalla P, Su XZ.

    Nat Genet. 2010 Mar;42(3):268-71. Epub 2010 Jan 31.

    PMID:
    20101240
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    ama1 genes of sympatric Plasmodium vivax and P. falciparum from Venezuela differ significantly in genetic diversity and recombination frequency.

    Ord RL, Tami A, Sutherland CJ.

    PLoS One. 2008;3(10):e3366. Epub 2008 Oct 10.

    PMID:
    18846221
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    A general SNP-based molecular barcode for Plasmodium falciparum identification and tracking.

    Daniels R, Volkman SK, Milner DA, Mahesh N, Neafsey DE, Park DJ, Rosen D, Angelino E, Sabeti PC, Wirth DF, Wiegand RC.

    Malar J. 2008 Oct 29;7:223.

    PMID:
    18959790
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    Recombination hotspots and population structure in Plasmodium falciparum.

    Mu J, Awadalla P, Duan J, McGee KM, Joy DA, McVean GA, Su XZ.

    PLoS Biol. 2005 Oct;3(10):e335. Epub 2005 Sep 13.

    PMID:
    16144426
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    Variations in host genes encoding adhesion molecules and susceptibility to falciparum malaria in India.

    Sinha S, Qidwai T, Kanchan K, Anand P, Jha GN, Pati SS, Mohanty S, Mishra SK, Tyagi PK, Sharma SK; Indian Genome Variation Consortium, Venkatesh V, Habib S.

    Malar J. 2008 Dec 4;7:250.

    PMID:
    19055786
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Sequence diversity and natural selection at domain I of the apical membrane antigen 1 among Indian Plasmodium falciparum populations.

    Garg S, Alam MT, Das MK, Dev V, Kumar A, Dash AP, Sharma YD.

    Malar J. 2007 Nov 22;6:154.

    PMID:
    18031585
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    Mapping drug resistance genes in Plasmodium falciparum by genome-wide association.

    Anderson TJ.

    Curr Drug Targets Infect Disord. 2004 Mar;4(1):65-78. Review.

    PMID:
    15032635
    [PubMed - indexed for MEDLINE]
    18.

    Genetic diversity and population structure of Plasmodium falciparum in the Philippines.

    Iwagami M, Rivera PT, Villacorte EA, Escueta AD, Hatabu T, Kawazu S, Hayakawa T, Tanabe K, Kano S.

    Malar J. 2009 May 8;8:96.

    PMID:
    19422722
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    Allele frequency-based and polymorphism-versus-divergence indices of balancing selection in a new filtered set of polymorphic genes in Plasmodium falciparum.

    Ochola LI, Tetteh KK, Stewart LB, Riitho V, Marsh K, Conway DJ.

    Mol Biol Evol. 2010 Oct;27(10):2344-51. Epub 2010 May 9.

    PMID:
    20457586
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    Genome wide linkage study, using a 250K SNP map, of Plasmodium falciparum infection and mild malaria attack in a Senegalese population.

    Milet J, Nuel G, Watier L, Courtin D, Slaoui Y, Senghor P, Migot-Nabias F, Gaye O, Garcia A.

    PLoS One. 2010 Jul 15;5(7):e11616.

    PMID:
    20657648
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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