Warning: The NCBI web site requires JavaScript to function. more...
Whole genome transcriptome polymorphisms in Arabidopsis thaliana.
Zhang X, Byrnes JK, Gal TS, Li WH, Borevitz JO.
Genome Biol. 2008;9(11):R165. Epub 2008 Nov 24.
Related citations
Global analysis of genetic, epigenetic and transcriptional polymorphisms in Arabidopsis thaliana using whole genome tiling arrays.
Zhang X, Shiu SH, Cal A, Borevitz JO.
PLoS Genet. 2008 Mar 21;4(3):e1000032. Erratum in: PLoS Genet. 2008 Jun;4(6). doi: 10.1371/annotation/e21d3565-fec6-44d9-8fab-83da49c7c0b8. Shiu, Shinhan [corrected to Shiu, Shin-Han].
At-TAX: a whole genome tiling array resource for developmental expression analysis and transcript identification in Arabidopsis thaliana.
Laubinger S, Zeller G, Henz SR, Sachsenberg T, Widmer CK, Naouar N, Vuylsteke M, Schölkopf B, Rätsch G, Weigel D.
Genome Biol. 2008;9(7):R112. Epub 2008 Jul 9.
Stress-induced changes in the Arabidopsis thaliana transcriptome analyzed using whole-genome tiling arrays.
Zeller G, Henz SR, Widmer CK, Sachsenberg T, Rätsch G, Weigel D, Laubinger S.
Plant J. 2009 Jun;58(6):1068-82. Epub 2009 Feb 13. Erratum in: Plant J. 2009 Dec;60(5):929.
Quantitative RNA expression analysis with Affymetrix Tiling 1.0R arrays identifies new E2F target genes.
Naouar N, Vandepoele K, Lammens T, Casneuf T, Zeller G, van Hummelen P, Weigel D, Rätsch G, Inzé D, Kuiper M, De Veylder L, Vuylsteke M.
Plant J. 2009 Jan;57(1):184-94. Epub 2008 Sep 19.
Assembly of a gene sequence tag microarray by reversible biotin-streptavidin capture for transcript analysis of Arabidopsis thaliana.
Wirta V, Holmberg A, Lukacs M, Nilsson P, Hilson P, Uhlén M, Bhalerao RP, Lundeberg J.
BMC Biotechnol. 2005 Feb 3;5:5.
Assessing the contribution of alternative splicing to proteome diversity in Arabidopsis thaliana using proteomics data.
Severing EI, van Dijk AD, van Ham RC.
BMC Plant Biol. 2011 May 16;11(1):82.
ARTADE2DB: improved statistical inferences for Arabidopsis gene functions and structure predictions by dynamic structure-based dynamic expression (DSDE) analyses.
Iida K, Kawaguchi S, Kobayashi N, Yoshida Y, Ishii M, Harada E, Hanada K, Matsui A, Okamoto M, Ishida J, Tanaka M, Morosawa T, Seki M, Toyoda T.
Plant Cell Physiol. 2011 Feb;52(2):254-64. Epub 2011 Jan 12.
Comprehensive analysis of Arabidopsis expression level polymorphisms with simple inheritance.
Plantegenet S, Weber J, Goldstein DR, Zeller G, Nussbaumer C, Thomas J, Weigel D, Harshman K, Hardtke CS.
Mol Syst Biol. 2009;5:242. Epub 2009 Feb 17.
Transcript normalization and segmentation of tiling array data.
Zeller G, Henz SR, Laubinger S, Weigel D, Rätsch G.
Pac Symp Biocomput. 2008:527-38.
Global analysis of allele-specific expression in Arabidopsis thaliana.
Zhang X, Borevitz JO.
Genetics. 2009 Aug;182(4):943-54. Epub 2009 May 27.
Analysis of the transcriptional complexity of Arabidopsis thaliana by massively parallel signature sequencing.
Meyers BC, Vu TH, Tej SS, Ghazal H, Matvienko M, Agrawal V, Ning J, Haudenschild CD.
Nat Biotechnol. 2004 Aug;22(8):1006-11. Epub 2004 Jul 11.
Genomic survey of gene expression diversity in Arabidopsis thaliana.
Kliebenstein DJ, West MA, van Leeuwen H, Kim K, Doerge RW, Michelmore RW, St Clair DA.
Genetics. 2006 Feb;172(2):1179-89. Epub 2005 Oct 3.
A novel method for the construction of genome wide transcriptome maps.
Brugmans B, Fernandez del Carmen A, Bachem CW, van Os H, van Eck HJ, Visser RG.
Plant J. 2002 Jul;31(2):211-22.
Mining the Arabidopsis thaliana genome for highly-divergent seven transmembrane receptors.
Moriyama EN, Strope PK, Opiyo SO, Chen Z, Jones AM.
Genome Biol. 2006;7(10):R96. Epub 2006 Oct 25.
Impact of natural genetic variation on the transcriptome of autotetraploid Arabidopsis thaliana.
Yu Z, Haberer G, Matthes M, Rattei T, Mayer KF, Gierl A, Torres-Ruiz RA.
Proc Natl Acad Sci U S A. 2010 Oct 12;107(41):17809-14. Epub 2010 Sep 27.
Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis.
Gutiérrez RA, Lejay LV, Dean A, Chiaromonte F, Shasha DE, Coruzzi GM.
Genome Biol. 2007;8(1):R7.
Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis.
Zhang X, Yazaki J, Sundaresan A, Cokus S, Chan SW, Chen H, Henderson IR, Shinn P, Pellegrini M, Jacobsen SE, Ecker JR.
Cell. 2006 Sep 22;126(6):1189-201. Epub 2006 Aug 31.
Tiling array-driven elucidation of transcriptional structures based on maximum-likelihood and Markov models.
Toyoda T, Shinozaki K.
Plant J. 2005 Aug;43(4):611-21.
Support vector machines-based identification of alternative splicing in Arabidopsis thaliana from whole-genome tiling arrays.
Eichner J, Zeller G, Laubinger S, Rätsch G.
BMC Bioinformatics. 2011 Feb 16;12:55.
Filter your results:
Your browsing activity is empty.
Activity recording is turned off.
Turn recording back on