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Analysis of saccharification in Brachypodium distachyon stems under mild conditions of hydrolysis.

Gomez LD, Bristow JK, Statham ER, McQueen-Mason SJ.

Biotechnol Biofuels. 2008 Oct 22;1(1):15.PMID: 18945335 [PubMed - in process]Related articlesFree article

The nuclear genome of Brachypodium distachyon: analysis of BAC end sequences.

Huo N, Lazo GR, Vogel JP, You FM, Ma Y, Hayden DM, Coleman-Derr D, Hill TA, Dvorak J, Anderson OD, Luo MC, Gu YQ.

Funct Integr Genomics. 2008 May;8(2):135-47. Epub 2007 Nov 6.PMID: 17985162 [PubMed - indexed for MEDLINE]Related articles

Exploring valid reference genes for gene expression studies in Brachypodium distachyon by real-time PCR.

Hong SY, Seo PJ, Yang MS, Xiang F, Park CM.

BMC Plant Biol. 2008 Nov 7;8:112.PMID: 18992143 [PubMed - indexed for MEDLINE]Related articlesFree article

Development of SSR markers and analysis of diversity in Turkish populations of Brachypodium distachyon.

Vogel JP, Tuna M, Budak H, Huo N, Gu YQ, Steinwand MA.

BMC Plant Biol. 2009 Jul 13;9:88.PMID: 19594938 [PubMed - indexed for MEDLINE]Related articlesFree article

Brachypodium distachyon. A new model system for functional genomics in grasses.

Draper J, Mur LA, Jenkins G, Ghosh-Biswas GC, Bablak P, Hasterok R, Routledge AP.

Plant Physiol. 2001 Dec;127(4):1539-55.PMID: 11743099 [PubMed - indexed for MEDLINE]Related articlesFree article

Brachypodium genomics.

Ozdemir BS, Hernandez P, Filiz E, Budak H.

Int J Plant Genomics. 2008;2008:536104.PMID: 18309367 [PubMed - in process]Related articlesFree article

Comparative cytogenetic analysis of the genomes of the model grass Brachypodium distachyon and its close relatives.

Wolny E, Hasterok R.

Ann Bot. 2009 Oct;104(5):873-81. Epub 2009 Jul 25.PMID: 19633311 [PubMed - indexed for MEDLINE]Related articles

EST sequencing and phylogenetic analysis of the model grass Brachypodium distachyon.

Vogel JP, Gu YQ, Twigg P, Lazo GR, Laudencia-Chingcuanco D, Hayden DM, Donze TJ, Vivian LA, Stamova B, Coleman-Derr D.

Theor Appl Genet. 2006 Jul;113(2):186-95. Epub 2006 May 18.PMID: 16791686 [PubMed - indexed for MEDLINE]Related articles

High-efficiency Agrobacterium-mediated transformation of Brachypodium distachyon inbred line Bd21-3.

Vogel J, Hill T.

Plant Cell Rep. 2008 Mar;27(3):471-8. Epub 2007 Nov 13.PMID: 17999063 [PubMed - indexed for MEDLINE]Related articles

Agrobacterium-mediated transformation of the temperate grass Brachypodium distachyon (genotype Bd21) for T-DNA insertional mutagenesis.

Vain P, Worland B, Thole V, McKenzie N, Alves SC, Opanowicz M, Fish LJ, Bevan MW, Snape JW.

Plant Biotechnol J. 2008 Apr;6(3):236-45. Epub 2007 Nov 12. Erratum in: Plant Biotechnol J. 2008 Dec;6(9):941. PMID: 18004984 [PubMed - indexed for MEDLINE]Related articles

The complete chloroplast genome sequence of Brachypodium distachyon: sequence comparison and phylogenetic analysis of eight grass plastomes.

Bortiri E, Coleman-Derr D, Lazo GR, Anderson OD, Gu YQ.

BMC Res Notes. 2008 Jul 31;1:61.PMID: 18710514 [PubMed - in process]Related articlesFree article

Genome sequencing and analysis of the model grass Brachypodium distachyon.

International Brachypodium Initiative.

Nature. 2010 Feb 11;463(7282):763-8.PMID: 20148030 [PubMed - in process]Related articles

Molecular, morphological, and cytological analysis of diverse Brachypodium distachyon inbred lines.

Filiz E, Ozdemir BS, Budak F, Vogel JP, Tuna M, Budak H.

Genome. 2009 Oct;52(10):876-90.PMID: 19935911 [PubMed - indexed for MEDLINE]Related articles

Strong population structure characterizes weediness gene evolution in the invasive grass species Brachypodium distachyon.

Bakker EG, Montgomery B, Nguyen T, Eide K, Chang J, Mockler TC, Liston A, Seabloom EW, Borer ET.

Mol Ecol. 2009 Jun;18(12):2588-601. Epub 2009 May 13.PMID: 19457186 [PubMed - indexed for MEDLINE]Related articles

Deep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response.

Zhang J, Xu Y, Huan Q, Chong K.

BMC Genomics. 2009 Sep 23;10:449.PMID: 19772667 [PubMed - indexed for MEDLINE]Related articlesFree article

A high-throughput Agrobacterium-mediated transformation system for the grass model species Brachypodium distachyon L.

Păcurar DI, Thordal-Christensen H, Nielsen KK, Lenk I.

Transgenic Res. 2008 Oct;17(5):965-75. Epub 2007 Dec 7. Erratum in: Transgenic Res. 2008 Oct;17(5):977. PMID: 18064538 [PubMed - indexed for MEDLINE]Related articles

Brachypodium distachyon: making hay with a wild grass.

Opanowicz M, Vain P, Draper J, Parker D, Doonan JH.

Trends Plant Sci. 2008 Apr;13(4):172-7. Epub 2008 Mar 17. Review.PMID: 18343709 [PubMed - indexed for MEDLINE]Related articles

A protocol for Agrobacterium-mediated transformation of Brachypodium distachyon community standard line Bd21.

Alves SC, Worland B, Thole V, Snape JW, Bevan MW, Vain P.

Nat Protoc. 2009;4(5):638-49.PMID: 19360019 [PubMed - indexed for MEDLINE]Related articles

Orthology between genomes of Brachypodium, wheat and rice.

Kumar S, Mohan A, Balyan HS, Gupta PK.

BMC Res Notes. 2009 May 27;2:93.PMID: 19470185 [PubMed]Related articlesFree article

Structural characterization of Brachypodium genome and its syntenic relationship with rice and wheat.

Huo N, Vogel JP, Lazo GR, You FM, Ma Y, McMahon S, Dvorak J, Anderson OD, Luo MC, Gu YQ.

Plant Mol Biol. 2009 May;70(1-2):47-61. Epub 2009 Jan 29.PMID: 19184460 [PubMed - indexed for MEDLINE]Related articles