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    Results: 1 to 20 of 98

    1.

    Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations.

    Satou Y, Mineta K, Ogasawara M, Sasakura Y, Shoguchi E, Ueno K, Yamada L, Matsumoto J, Wasserscheid J, Dewar K, Wiley GB, Macmil SL, Roe BA, Zeller RW, Hastings KE, Lemaire P, Lindquist E, Endo T, Hotta K, Inaba K.

    Genome Biol. 2008 Oct 14;9(10):R152.

    PMID:
    18854010
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Computational analysis of Ciona intestinalis operons.

    Zeller RW.

    Integr Comp Biol. 2010 Jul;50(1):75-85. Epub 2010 May 11.

    PMID:
    21558189
    [PubMed - indexed for MEDLINE]
    Free Article
    3.

    Chromosomal mapping of 170 BAC clones in the ascidian Ciona intestinalis.

    Shoguchi E, Kawashima T, Satou Y, Hamaguchi M, Sin-I T, Kohara Y, Putnam N, Rokhsar DS, Satoh N.

    Genome Res. 2006 Feb;16(2):297-303. Epub 2005 Dec 14.

    PMID:
    16354750
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    Genomic overview of mRNA 5'-leader trans-splicing in the ascidian Ciona intestinalis.

    Satou Y, Hamaguchi M, Takeuchi K, Hastings KE, Satoh N.

    Nucleic Acids Res. 2006 Jul 5;34(11):3378-88. Print 2006.

    PMID:
    16822859
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    Huntingtin gene evolution in Chordata and its peculiar features in the ascidian Ciona genus.

    Gissi C, Pesole G, Cattaneo E, Tartari M.

    BMC Genomics. 2006 Nov 8;7:288.

    PMID:
    17092333
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    A cDNA resource from the basal chordate Ciona intestinalis.

    Satou Y, Yamada L, Mochizuki Y, Takatori N, Kawashima T, Sasaki A, Hamaguchi M, Awazu S, Yagi K, Sasakura Y, Nakayama A, Ishikawa H, Inaba K, Satoh N.

    Genesis. 2002 Aug;33(4):153-4.

    PMID:
    12203911
    [PubMed - indexed for MEDLINE]
    8.

    Ciona intestinalis cDNA projects: expressed sequence tag analyses and gene expression profiles during embryogenesis.

    Satou Y, Takatori N, Fujiwara S, Nishikata T, Saiga H, Kusakabe T, Shin-i T, Kohara Y, Satoh N.

    Gene. 2002 Apr 3;287(1-2):83-96.

    PMID:
    11992726
    [PubMed - indexed for MEDLINE]
    9.

    An integrated database of the ascidian, Ciona intestinalis: towards functional genomics.

    Satou Y, Kawashima T, Shoguchi E, Nakayama A, Satoh N.

    Zoolog Sci. 2005 Aug;22(8):837-43.

    PMID:
    16141696
    [PubMed - indexed for MEDLINE]
    10.

    Fluorescent in situ hybridization to ascidian chromosomes.

    Shoguchi E, Ikuta T, Yoshizaki F, Satou Y, Satoh N, Asano K, Saiga H, Nishikata T.

    Zoolog Sci. 2004 Feb;21(2):153-7.

    PMID:
    14993826
    [PubMed - indexed for MEDLINE]
    11.

    A genome-wide survey of genes for enzymes involved in pigment synthesis in an ascidian, Ciona intestinalis.

    Takeuchi K, Satou Y, Yamamoto H, Satoh N.

    Zoolog Sci. 2005 Jul;22(7):723-34.

    PMID:
    16082161
    [PubMed - indexed for MEDLINE]
    12.

    Construction of a cDNA microarray derived from the ascidian Ciona intestinalis.

    Azumi K, Takahashi H, Miki Y, Fujie M, Usami T, Ishikawa H, Kitayama A, Satou Y, Ueno N, Satoh N.

    Zoolog Sci. 2003 Oct;20(10):1223-9.

    PMID:
    14569145
    [PubMed - indexed for MEDLINE]
    13.

    Transcript mapping and genome annotation of ascidian mtDNA using EST data.

    Gissi C, Pesole G.

    Genome Res. 2003 Sep;13(9):2203-12. Epub 2003 Aug 12.

    PMID:
    12915488
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    A genomewide survey of developmentally relevant genes in Ciona intestinalis. II. Genes for homeobox transcription factors.

    Wada S, Tokuoka M, Shoguchi E, Kobayashi K, Di Gregorio A, Spagnuolo A, Branno M, Kohara Y, Rokhsar D, Levine M, Saiga H, Satoh N, Satou Y.

    Dev Genes Evol. 2003 Jun;213(5-6):222-34. Epub 2003 May 8.

    PMID:
    12736825
    [PubMed - indexed for MEDLINE]
    15.

    Diploid genome reconstruction of Ciona intestinalis and comparative analysis with Ciona savignyi.

    Kim JH, Waterman MS, Li LM.

    Genome Res. 2007 Jul;17(7):1101-10. Epub 2007 Jun 13.

    PMID:
    17567986
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Analysis of canonical and non-canonical splice sites in mammalian genomes.

    Burset M, Seledtsov IA, Solovyev VV.

    Nucleic Acids Res. 2000 Nov 1;28(21):4364-75.

    PMID:
    11058137
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    A genomewide survey of developmentally relevant genes in Ciona intestinalis. III. Genes for Fox, ETS, nuclear receptors and NFkappaB.

    Yagi K, Satou Y, Mazet F, Shimeld SM, Degnan B, Rokhsar D, Levine M, Kohara Y, Satoh N.

    Dev Genes Evol. 2003 Jun;213(5-6):235-44. Epub 2003 May 13.

    PMID:
    12743820
    [PubMed - indexed for MEDLINE]
    18.

    Large scale EST analyses in Ciona intestinalis: its application as Northern blot analyses.

    Satou Y, Kawashima T, Kohara Y, Satoh N.

    Dev Genes Evol. 2003 Jun;213(5-6):314-8. Epub 2003 May 8.

    PMID:
    12736826
    [PubMed - indexed for MEDLINE]
    19.

    Gene number in an invertebrate chordate, Ciona intestinalis.

    Simmen MW, Leitgeb S, Clark VH, Jones SJ, Bird A.

    Proc Natl Acad Sci U S A. 1998 Apr 14;95(8):4437-40.

    PMID:
    9539755
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    Characteristics of NADPH oxidase genes (Nox2, p22, p47, and p67) and Nox4 gene expressed in blood cells of juvenile Ciona intestinalis.

    Inoue Y, Ogasawara M, Moroi T, Satake M, Azumi K, Moritomo T, Nakanishi T.

    Immunogenetics. 2005 Aug;57(7):520-34. Epub 2005 Sep 29.

    PMID:
    16025326
    [PubMed - indexed for MEDLINE]

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