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    Results: 1 to 20 of 126

    1.

    OntoGene in BioCreative II.

    Rinaldi F, Kappeler T, Kaljurand K, Schneider G, Klenner M, Clematide S, Hess M, von Allmen JM, Parisot P, Romacker M, Vachon T.

    Genome Biol. 2008;9 Suppl 2:S13. Epub 2008 Sep 1.

    PMID:
    18834491
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Overview of the protein-protein interaction annotation extraction task of BioCreative II.

    Krallinger M, Leitner F, Rodriguez-Penagos C, Valencia A.

    Genome Biol. 2008;9 Suppl 2:S4. Epub 2008 Sep 1.

    PMID:
    18834495
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Evaluation of text-mining systems for biology: overview of the Second BioCreative community challenge.

    Krallinger M, Morgan A, Smith L, Leitner F, Tanabe L, Wilbur J, Hirschman L, Valencia A.

    Genome Biol. 2008;9 Suppl 2:S1. Epub 2008 Sep 1.

    PMID:
    18834487
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    An evaluation of GO annotation retrieval for BioCreAtIvE and GOA.

    Camon EB, Barrell DG, Dimmer EC, Lee V, Magrane M, Maslen J, Binns D, Apweiler R.

    BMC Bioinformatics. 2005;6 Suppl 1:S17. Epub 2005 May 24.

    PMID:
    15960829
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    MINT and IntAct contribute to the Second BioCreative challenge: serving the text-mining community with high quality molecular interaction data.

    Chatr-aryamontri A, Kerrien S, Khadake J, Orchard S, Ceol A, Licata L, Castagnoli L, Costa S, Derow C, Huntley R, Aranda B, Leroy C, Thorneycroft D, Apweiler R, Cesareni G, Hermjakob H.

    Genome Biol. 2008;9 Suppl 2:S5. Epub 2008 Sep 1.

    PMID:
    18834496
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Overview of BioCreAtIvE: critical assessment of information extraction for biology.

    Hirschman L, Yeh A, Blaschke C, Valencia A.

    BMC Bioinformatics. 2005;6 Suppl 1:S1. Epub 2005 May 24.

    PMID:
    15960821
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    OntoGene in BioCreative II.5.

    Rinaldi F, Schneider G, Kaljurand K, Clematide S, Vachon T, Romacker M.

    IEEE/ACM Trans Comput Biol Bioinform. 2010 Jul-Sep;7(3):472-80.

    PMID:
    20671319
    [PubMed - indexed for MEDLINE]
    8.

    Overview of BioCreative II gene normalization.

    Morgan AA, Lu Z, Wang X, Cohen AM, Fluck J, Ruch P, Divoli A, Fundel K, Leaman R, Hakenberg J, Sun C, Liu HH, Torres R, Krauthammer M, Lau WW, Liu H, Hsu CN, Schuemie M, Cohen KB, Hirschman L.

    Genome Biol. 2008;9 Suppl 2:S3. Epub 2008 Sep 1.

    PMID:
    18834494
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    An Overview of BioCreative II.5.

    Leitner F, Mardis SA, Krallinger M, Cesareni G, Hirschman LA, Valencia A.

    IEEE/ACM Trans Comput Biol Bioinform. 2010 Jul-Sep;7(3):385-99.

    PMID:
    20704011
    [PubMed - indexed for MEDLINE]
    10.

    A sentence sliding window approach to extract protein annotations from biomedical articles.

    Krallinger M, Padron M, Valencia A.

    BMC Bioinformatics. 2005;6 Suppl 1:S19. Epub 2005 May 24.

    PMID:
    15960831
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Extract interaction detection methods from the biological literature.

    Wang H, Huang M, Zhu X.

    BMC Bioinformatics. 2009 Jan 30;10 Suppl 1:S55.

    PMID:
    19208158
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Mining physical protein-protein interactions from the literature.

    Huang M, Ding S, Wang H, Zhu X.

    Genome Biol. 2008;9 Suppl 2:S12. Epub 2008 Sep 1.

    PMID:
    18834490
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    Efficient extraction of protein-protein interactions from full-text articles.

    Hakenberg J, Leaman R, Vo NH, Jonnalagadda S, Sullivan R, Miller C, Tari L, Baral C, Gonzalez G.

    IEEE/ACM Trans Comput Biol Bioinform. 2010 Jul-Sep;7(3):481-94.

    PMID:
    20498514
    [PubMed - indexed for MEDLINE]
    14.

    Text detective: a rule-based system for gene annotation in biomedical texts.

    Tamames J.

    BMC Bioinformatics. 2005;6 Suppl 1:S10. Epub 2005 May 24.

    PMID:
    15960822
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    Finding genomic ontology terms in text using evidence content.

    Couto FM, Silva MJ, Coutinho PM.

    BMC Bioinformatics. 2005;6 Suppl 1:S21. Epub 2005 May 24.

    PMID:
    15960834
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Overview of the BioCreative III Workshop.

    Arighi CN, Lu Z, Krallinger M, Cohen KB, Wilbur WJ, Valencia A, Hirschman L, Wu CH.

    BMC Bioinformatics. 2011 Oct 3;12 Suppl 8:S1.

    PMID:
    22151647
    [PubMed - in process]
    Free PMC Article
    17.

    Automating curation using a natural language processing pipeline.

    Alex B, Grover C, Haddow B, Kabadjov M, Klein E, Matthews M, Tobin R, Wang X.

    Genome Biol. 2008;9 Suppl 2:S10. Epub 2008 Sep 1.

    PMID:
    18834488
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    18.

    Detection of interaction articles and experimental methods in biomedical literature.

    Schneider G, Clematide S, Rinaldi F.

    BMC Bioinformatics. 2011 Oct 3;12 Suppl 8:S13.

    PMID:
    22151872
    [PubMed - in process]
    Free PMC Article
    19.

    BioCreAtIvE task 1A: gene mention finding evaluation.

    Yeh A, Morgan A, Colosimo M, Hirschman L.

    BMC Bioinformatics. 2005;6 Suppl 1:S2. Epub 2005 May 24.

    PMID:
    15960832
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    Exploring species-based strategies for gene normalization.

    Verspoor K, Roeder C, Johnson HL, Cohen KB, Baumgartner WA Jr, Hunter LE.

    IEEE/ACM Trans Comput Biol Bioinform. 2010 Jul-Sep;7(3):462-71.

    PMID:
    20671318
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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