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    Results: 1 to 20 of 94

    1.

    SigWin-detector: a Grid-enabled workflow for discovering enriched windows of genomic features related to DNA sequences.

    Inda MA, van Batenburg MF, Roos M, Belloum AS, Vasunin D, Wibisono A, van Kampen AH, Breit TM.

    BMC Res Notes. 2008 Aug 8;1:63.PMID: 18710516 [PubMed - in process]Related articlesFree article

    2.

    SigWinR; the SigWin-detector updated and ported to R.

    de Leeuw WC, Rauwerda H, Inda MA, Bruning O, Breit TM.

    BMC Res Notes. 2009 Oct 6;2:205.PMID: 19807919 [PubMed - in process]Related articlesFree article

    3.

    BioWMS: a web-based Workflow Management System for bioinformatics.

    Bartocci E, Corradini F, Merelli E, Scortichini L.

    BMC Bioinformatics. 2007 Mar 8;8 Suppl 1:S2.PMID: 17430564 [PubMed - indexed for MEDLINE]Related articlesFree article

    4.

    High performance GRID based implementation for genomics and protein analysis.

    Milanesi L, Merelli I.

    Stud Health Technol Inform. 2006;120:374-80.PMID: 16823155 [PubMed - indexed for MEDLINE]Related articles

    5.

    A plant resource and experiment management system based on the Golm Plant Database as a basic tool for omics research.

    Köhl KI, Basler G, Lüdemann A, Selbig J, Walther D.

    Plant Methods. 2008 May 21;4:11.PMID: 18495032 [PubMed - in process]Related articlesFree article

    6.

    A services oriented system for bioinformatics applications on the grid.

    Aloisio G, Cafaro M, Epicoco I, Fiore S, Mirto M.

    Stud Health Technol Inform. 2007;126:174-83.PMID: 17476060 [PubMed - indexed for MEDLINE]Related articles

    7.

    Blast2GO goes grid: developing a grid-enabled prototype for functional genomics analysis.

    Aparicio G, Götz S, Conesa A, Segrelles D, Blanquer I, García JM, Hernandez V, Robles M, Talon M.

    Stud Health Technol Inform. 2006;120:194-204.PMID: 16823138 [PubMed - indexed for MEDLINE]Related articles

    8.

    Performing statistical analyses on quantitative data in Taverna workflows: an example using R and maxdBrowse to identify differentially-expressed genes from microarray data.

    Li P, Castrillo JI, Velarde G, Wassink I, Soiland-Reyes S, Owen S, Withers D, Oinn T, Pocock MR, Goble CA, Oliver SG, Kell DB.

    BMC Bioinformatics. 2008 Aug 7;9:334.PMID: 18687127 [PubMed - indexed for MEDLINE]Related articlesFree article

    9.

    HitKeeper, a generic software package for hit list management.

    Hau J, Muller M, Pagni M.

    Source Code Biol Med. 2007 Mar 28;2:2.PMID: 17391514 [PubMed]Related articlesFree article

    10.

    An integrative model for in-silico clinical-genomics discovery science.

    Lussier YA, Sarkar IN, Cantor M.

    Proc AMIA Symp. 2002:469-73.PMID: 12463868 [PubMed - indexed for MEDLINE]Related articlesFree article

    11.

    Conceptual-level workflow modeling of scientific experiments using NMR as a case study.

    Verdi KK, Ellis HJ, Gryk MR.

    BMC Bioinformatics. 2007 Jan 30;8:31.PMID: 17263870 [PubMed - indexed for MEDLINE]Related articlesFree article

    12.

    ReRep: computational detection of repetitive sequences in genome survey sequences (GSS).

    Otto TD, Gomes LH, Alves-Ferreira M, de Miranda AB, Degrave WM.

    BMC Bioinformatics. 2008 Sep 9;9:366.PMID: 18782453 [PubMed - indexed for MEDLINE]Related articlesFree article

    13.

    Integrating Open Grid Services Architecture Data Access and Integration with computational Grid workflows.

    Kukla T, Kiss T, Kacsuk P, Terstyanszky G.

    Philos Transact A Math Phys Eng Sci. 2009 Jun 28;367(1897):2521-32.PMID: 19451107 [PubMed]Related articles

    14.

    A highly optimized grid deployment: the metagenomic analysis example.

    Aparicio G, Blanquer I, Hernández V.

    Stud Health Technol Inform. 2008;138:105-15.PMID: 18560112 [PubMed - indexed for MEDLINE]Related articles

    15.

    Interoperability of GADU in using heterogeneous grid resources for bioinformatics applications.

    Sulakhe D, Rodriguez A, Wilde M, Foster I, Maltsev N.

    IEEE Trans Inf Technol Biomed. 2008 Mar;12(2):241-6.PMID: 18348953 [PubMed - indexed for MEDLINE]Related articles

    16.

    SOMA--workflow for small molecule property calculations on a multiplatform computing grid.

    Lehtovuori PT, Nyrönen TH.

    J Chem Inf Model. 2006 Mar-Apr;46(2):620-5.PMID: 16562991 [PubMed]Related articles

    17.

    National Mesothelioma Virtual Bank: a standard based biospecimen and clinical data resource to enhance translational research.

    Amin W, Parwani AV, Schmandt L, Mohanty SK, Farhat G, Pople AK, Winters SB, Whelan NB, Schneider AM, Milnes JT, Valdivieso FA, Feldman M, Pass HI, Dhir R, Melamed J, Becich MJ.

    BMC Cancer. 2008 Aug 13;8:236.PMID: 18700971 [PubMed - indexed for MEDLINE]Related articlesFree article

    18.

    Efficient, Distributed and Interactive Neuroimaging Data Analysis Using the LONI Pipeline.

    Dinov ID, Van Horn JD, Lozev KM, Magsipoc R, Petrosyan P, Liu Z, Mackenzie-Graham A, Eggert P, Parker DS, Toga AW.

    Front Neuroinformatics. 2009;3:22. Epub 2009 Jul 20.PMID: 19649168 [PubMed - in process]Related articlesFree article

    19.

    Evolution of biological sequences implies an extreme value distribution of type I for both global and local pairwise alignment scores.

    Bastien O, Maréchal E.

    BMC Bioinformatics. 2008 Aug 7;9:332.PMID: 18687111 [PubMed - indexed for MEDLINE]Related articlesFree article

    20.

    Constructing computational pipelines.

    Halling-Brown M, Shepherd AJ.

    Methods Mol Biol. 2008;453:451-70.PMID: 18712319 [PubMed - indexed for MEDLINE]Related articles

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