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    Results: 1 to 20 of 110

    1.

    MeV+R: using MeV as a graphical user interface for Bioconductor applications in microarray analysis.

    Chu VT, Gottardo R, Raftery AE, Bumgarner RE, Yeung KY.

    Genome Biol. 2008;9(7):R118. Epub 2008 Jul 24.

    PMID:
    18652698
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    affylmGUI: a graphical user interface for linear modeling of single channel microarray data.

    Wettenhall JM, Simpson KM, Satterley K, Smyth GK.

    Bioinformatics. 2006 Apr 1;22(7):897-9. Epub 2006 Feb 2.

    PMID:
    16455752
    [PubMed - indexed for MEDLINE]
    Free Article
    3.

    oneChannelGUI: a graphical interface to Bioconductor tools, designed for life scientists who are not familiar with R language.

    Sanges R, Cordero F, Calogero RA.

    Bioinformatics. 2007 Dec 15;23(24):3406-8. Epub 2007 Sep 17.

    PMID:
    17875544
    [PubMed - indexed for MEDLINE]
    Free Article
    4.

    WebArray: an online platform for microarray data analysis.

    Xia X, McClelland M, Wang Y.

    BMC Bioinformatics. 2005 Dec 21;6:306.

    PMID:
    16371165
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    limmaGUI: a graphical user interface for linear modeling of microarray data.

    Wettenhall JM, Smyth GK.

    Bioinformatics. 2004 Dec 12;20(18):3705-6. Epub 2004 Aug 5.

    PMID:
    15297296
    [PubMed - indexed for MEDLINE]
    Free Article
    6.

    CARMAweb: comprehensive R- and bioconductor-based web service for microarray data analysis.

    Rainer J, Sanchez-Cabo F, Stocker G, Sturn A, Trajanoski Z.

    Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W498-503.

    PMID:
    16845058
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Codelink: an R package for analysis of GE healthcare gene expression bioarrays.

    Diez D, Alvarez R, Dopazo A.

    Bioinformatics. 2007 May 1;23(9):1168-9. Epub 2007 Mar 7.

    PMID:
    17344240
    [PubMed - indexed for MEDLINE]
    Free Article
    8.

    arrayQCplot: software for checking the quality of microarray data.

    Lee EK, Yi SG, Park T.

    Bioinformatics. 2006 Sep 15;22(18):2305-7. Epub 2006 Jul 24.

    PMID:
    16864592
    [PubMed - indexed for MEDLINE]
    Free Article
    9.

    IlluminaGUI: graphical user interface for analyzing gene expression data generated on the Illumina platform.

    Schultze JL, Eggle D.

    Bioinformatics. 2007 Jun 1;23(11):1431-3. Epub 2007 Mar 23.

    PMID:
    17384020
    [PubMed - indexed for MEDLINE]
    Free Article
    10.

    RReportGenerator: automatic reports from routine statistical analysis using R.

    Raffelsberger W, Krause Y, Moulinier L, Kieffer D, Morand AL, Brino L, Poch O.

    Bioinformatics. 2008 Jan 15;24(2):276-8. Epub 2007 Nov 24.

    PMID:
    18037684
    [PubMed - indexed for MEDLINE]
    Free Article
    11.

    A framework for oligonucleotide microarray preprocessing.

    Carvalho BS, Irizarry RA.

    Bioinformatics. 2010 Oct 1;26(19):2363-7. Epub 2010 Aug 5.

    PMID:
    20688976
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Importing MAGE-ML format microarray data into BioConductor.

    Durinck S, Allemeersch J, Carey VJ, Moreau Y, De Moor B.

    Bioinformatics. 2004 Dec 12;20(18):3641-2. Epub 2004 Jul 15.

    PMID:
    15256416
    [PubMed - indexed for MEDLINE]
    Free Article
    13.

    The Firegoose: two-way integration of diverse data from different bioinformatics web resources with desktop applications.

    Bare JC, Shannon PT, Schmid AK, Baliga NS.

    BMC Bioinformatics. 2007 Nov 19;8:456.

    PMID:
    18021453
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    MAGIC Tool: integrated microarray data analysis.

    Heyer LJ, Moskowitz DZ, Abele JA, Karnik P, Choi D, Campbell AM, Oldham EE, Akin BK.

    Bioinformatics. 2005 May 1;21(9):2114-5. Epub 2005 Jan 12.

    PMID:
    15647303
    [PubMed - indexed for MEDLINE]
    Free Article
    15.

    Goulphar: rapid access and expertise for standard two-color microarray normalization methods.

    Lemoine S, Combes F, Servant N, Le Crom S.

    BMC Bioinformatics. 2006 Oct 23;7:467.

    PMID:
    17059595
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    MADE4: an R package for multivariate analysis of gene expression data.

    Culhane AC, Thioulouse J, Perrière G, Higgins DG.

    Bioinformatics. 2005 Jun 1;21(11):2789-90. Epub 2005 Mar 29.

    PMID:
    15797915
    [PubMed - indexed for MEDLINE]
    Free Article
    17.

    Robin: an intuitive wizard application for R-based expression microarray quality assessment and analysis.

    Lohse M, Nunes-Nesi A, Krüger P, Nagel A, Hannemann J, Giorgi FM, Childs L, Osorio S, Walther D, Selbig J, Sreenivasulu N, Stitt M, Fernie AR, Usadel B.

    Plant Physiol. 2010 Jun;153(2):642-51. Epub 2010 Apr 13.

    PMID:
    20388663
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    18.

    JColorGrid: software for the visualization of biological measurements.

    Joachimiak MP, Weisman JL, May BCh.

    BMC Bioinformatics. 2006 Apr 27;7:225.

    PMID:
    16640789
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    SAFEGUI: resampling-based tests of categorical significance in gene expression data made easy.

    Gatti DM, Sypa M, Rusyn I, Wright FA, Barry WT.

    Bioinformatics. 2009 Feb 15;25(4):541-2. Epub 2008 Dec 19.

    PMID:
    19098030
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    GenoMap, a circular genome data viewer.

    Sato N, Ehira S.

    Bioinformatics. 2003 Aug 12;19(12):1583-4.

    PMID:
    12912843
    [PubMed - indexed for MEDLINE]
    Free Article

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