PubMed

Blocking primers to enhance PCR amplification of rare sequences in mixed samples - a case study on prey DNA in Antarctic krill stomachs.

Vestheim H, Jarman SN.

Front Zool. 2008 Jul 20;5:12.PMID: 18638418 [PubMed - in process]Related articlesFree article

Group-specific polymerase chain reaction for DNA-based analysis of species diversity and identity in dietary samples.

Jarman SN, Deagle BE, Gales NJ.

Mol Ecol. 2004 May;13(5):1313-22.PMID: 15078466 [PubMed - indexed for MEDLINE]Related articles

Hemi-nested touchdown PCR combined with primer-template mismatch PCR for rapid isolation and sequencing of low molecular weight glutenin subunit gene family from a hexaploid wheat BAC library.

Huang XQ, Cloutier S.

BMC Genet. 2007 May 4;8:18.PMID: 17480230 [PubMed - indexed for MEDLINE]Related articlesFree article

Studying seabird diet through genetic analysis of faeces: a case study on macaroni penguins (Eudyptes chrysolophus).

Deagle BE, Gales NJ, Evans K, Jarman SN, Robinson S, Trebilco R, Hindell MA.

PLoS One. 2007 Sep 5;2(9):e831.PMID: 17786203 [PubMed - indexed for MEDLINE]Related articlesFree article

Molecular Detection of Phytophthora ramorum, the Causal Agent of Sudden Oak Death in California, and Two Additional Species Commonly Recovered from Diseased Plant Material.

Martin FN, Tooley PW, Blomquist C.

Phytopathology. 2004 Jun;94(6):621-31.PMID: 18943487 [PubMed - in process]Related articlesFree article

Pseudogenes and DNA-based diet analyses: a cautionary tale from a relatively well sampled predator-prey system.

Dunshea G, Barros NB, Wells RS, Gales NJ, Hindell MA, Jarman SN.

Bull Entomol Res. 2008 Jun;98(3):239-48. Epub 2008 Apr 28.PMID: 18439341 [PubMed - indexed for MEDLINE]Related articles

Effect of primer mismatch, annealing temperature and PCR cycle number on 16S rRNA gene-targetting bacterial community analysis.

Sipos R, Székely AJ, Palatinszky M, Révész S, Márialigeti K, Nikolausz M.

FEMS Microbiol Ecol. 2007 May;60(2):341-50. Epub 2007 Mar 2.PMID: 17343679 [PubMed - indexed for MEDLINE]Related articles

PCR-SSCP comparison of 16S rDNA sequence diversity in soil DNA obtained using different isolation and purification methods.

Stach JE, Bathe S, Clapp JP, Burns RG.

FEMS Microbiol Ecol. 2001 Jul;36(2-3):139-151.PMID: 11451518 [PubMed - as supplied by publisher]Related articles

Primer-template interactions during DNA amplification fingerprinting with single arbitrary oligonucleotides.

Caetano-Anollés G, Bassam BJ, Gresshoff PM.

Mol Gen Genet. 1992 Nov;235(2-3):157-65.PMID: 1465089 [PubMed - indexed for MEDLINE]Related articles

Bias in template-to-product ratios in multitemplate PCR.

Polz MF, Cavanaugh CM.

Appl Environ Microbiol. 1998 Oct;64(10):3724-30.PMID: 9758791 [PubMed - indexed for MEDLINE]Related articlesFree article

Use of the ITS primers, ITS1F and ITS4, to characterize fungal abundance and diversity in mixed-template samples by qPCR and length heterogeneity analysis.

Manter DK, Vivanco JM.

J Microbiol Methods. 2007 Oct;71(1):7-14. Epub 2007 Jul 5.PMID: 17683818 [PubMed - indexed for MEDLINE]Related articles

DNA as a dietary biomarker in Antarctic krill, Euphausia superba.

Passmore AJ, Jarman SN, Swadling KM, Kawaguchi S, McMinn A, Nicol S.

Mar Biotechnol (NY). 2006 Nov-Dec;8(6):686-96. Epub 2006 Aug 23.PMID: 16924375 [PubMed - indexed for MEDLINE]Related articles

Detection of Actinobacteria cultivated from environmental samples reveals bias in universal primers.

Farris MH, Olson JB.

Lett Appl Microbiol. 2007 Oct;45(4):376-81.PMID: 17897379 [PubMed - indexed for MEDLINE]Related articles

[An improved PCR-based megaprimer method for site-directed mutagenesis]

Mo Q, Xu X, Zhong X, Liu Z.

Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2002 Feb;19(1):68-71. Chinese. PMID: 11836693 [PubMed - indexed for MEDLINE]Related articles

Semi-nested PCR analysis of unknown tags on serial analysis of gene expression.

Xu WJ, Li QL, Yao CJ, Wang ZX, Zhao YX, Qiao ZD.

FEBS J. 2008 Nov;275(21):5422-8.PMID: 18959766 [PubMed - indexed for MEDLINE]Related articles

Locked nucleic acid pentamers as universal PCR primers for genomic DNA amplification.

Sun Z, Chen Z, Hou X, Li S, Zhu H, Qian J, Lu D, Liu W.

PLoS One. 2008;3(11):e3701. Epub 2008 Nov 11.PMID: 19002243 [PubMed - indexed for MEDLINE]Related articlesFree article

The elimination of primer-dimer accumulation in PCR.

Brownie J, Shawcross S, Theaker J, Whitcombe D, Ferrie R, Newton C, Little S.

Nucleic Acids Res. 1997 Aug 15;25(16):3235-41.PMID: 9241236 [PubMed - indexed for MEDLINE]Related articlesFree article

Quantitative ratio of primer pairs and annealing temperature affecting PCR products in duplex amplification.

Bercovich D, Regev Z, Ratz T, Luder A, Plotsky Y, Gruenbaum Y.

Biotechniques. 1999 Oct;27(4):762-4, 766-8, 770.PMID: 10524319 [PubMed - indexed for MEDLINE]Related articles

DNA analysis with multiplex microarray-enhanced PCR.

Pemov A, Modi H, Chandler DP, Bavykin S.

Nucleic Acids Res. 2005 Jan 20;33(2):e11.PMID: 15661850 [PubMed - indexed for MEDLINE]Related articlesFree article

Systematic design and testing of nested (RT-)PCR primers for specific amplification of mouse rearranged/expressed immunoglobulin variable region genes from small number of B cells.

Rohatgi S, Ganju P, Sehgal D.

J Immunol Methods. 2008 Dec 31;339(2):205-19. Epub 2008 Oct 14.PMID: 18926828 [PubMed - indexed for MEDLINE]Related articles