Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

    Results: 1 to 20 of 1342

    1.

    Inferring mouse gene functions from genomic-scale data using a combined functional network/classification strategy.

    Kim WK, Krumpelman C, Marcotte EM.

    Genome Biol. 2008;9 Suppl 1:S5. Epub 2008 Jun 27.

    PMID:
    18613949
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    A critical assessment of Mus musculus gene function prediction using integrated genomic evidence.

    Peña-Castillo L, Tasan M, Myers CL, Lee H, Joshi T, Zhang C, Guan Y, Leone M, Pagnani A, Kim WK, Krumpelman C, Tian W, Obozinski G, Qi Y, Mostafavi S, Lin GN, Berriz GF, Gibbons FD, Lanckriet G, Qiu J, Grant C, Barutcuoglu Z, Hill DP, Warde-Farley D, Grouios C, Ray D, Blake JA, Deng M, Jordan MI, Noble WS, Morris Q, Klein-Seetharaman J, Bar-Joseph Z, Chen T, Sun F, Troyanskaya OG, Marcotte EM, Xu D, Hughes TR, Roth FP.

    Genome Biol. 2008;9 Suppl 1:S2. Epub 2008 Jun 27.

    PMID:
    18613946
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Gene networks in Drosophila melanogaster: integrating experimental data to predict gene function.

    Costello JC, Dalkilic MM, Beason SM, Gehlhausen JR, Patwardhan R, Middha S, Eads BD, Andrews JR.

    Genome Biol. 2009;10(9):R97. Epub 2009 Sep 16.

    PMID:
    19758432
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    Discovering cancer genes by integrating network and functional properties.

    Li L, Zhang K, Lee J, Cordes S, Davis DP, Tang Z.

    BMC Med Genomics. 2009 Sep 19;2:61.

    PMID:
    19765316
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    GeneMANIA: a real-time multiple association network integration algorithm for predicting gene function.

    Mostafavi S, Ray D, Warde-Farley D, Grouios C, Morris Q.

    Genome Biol. 2008;9 Suppl 1:S4. Epub 2008 Jun 27.

    PMID:
    18613948
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    A genomewide functional network for the laboratory mouse.

    Guan Y, Myers CL, Lu R, Lemischka IR, Bult CJ, Troyanskaya OG.

    PLoS Comput Biol. 2008 Sep 26;4(9):e1000165.

    PMID:
    18818725
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Predicting gene function in a hierarchical context with an ensemble of classifiers.

    Guan Y, Myers CL, Hess DC, Barutcuoglu Z, Caudy AA, Troyanskaya OG.

    Genome Biol. 2008;9 Suppl 1:S3. Epub 2008 Jun 27.

    PMID:
    18613947
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Gene expression trends and protein features effectively complement each other in gene function prediction.

    Wabnik K, Hvidsten TR, Kedzierska A, Van Leene J, De Jaeger G, Beemster GT, Komorowski J, Kuiper MT.

    Bioinformatics. 2009 Feb 1;25(3):322-30. Epub 2008 Dec 2.

    PMID:
    19050035
    [PubMed - indexed for MEDLINE]
    Free Article
    9.

    Human gene coexpression landscape: confident network derived from tissue transcriptomic profiles.

    Prieto C, Risueño A, Fontanillo C, De las Rivas J.

    PLoS One. 2008;3(12):e3911. Epub 2008 Dec 15.

    PMID:
    19081792
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    Combining guilt-by-association and guilt-by-profiling to predict Saccharomyces cerevisiae gene function.

    Tian W, Zhang LV, Taşan M, Gibbons FD, King OD, Park J, Wunderlich Z, Cherry JM, Roth FP.

    Genome Biol. 2008;9 Suppl 1:S7. Epub 2008 Jun 27.

    PMID:
    18613951
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Mining phenotypes for gene function prediction.

    Groth P, Weiss B, Pohlenz HD, Leser U.

    BMC Bioinformatics. 2008 Mar 3;9:136.

    PMID:
    18315868
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Meta-analysis approach identifies candidate genes and associated molecular networks for type-2 diabetes mellitus.

    Rasche A, Al-Hasani H, Herwig R.

    BMC Genomics. 2008 Jun 30;9:310.

    PMID:
    18590522
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    Synergistic use of plant-prokaryote comparative genomics for functional annotations.

    Gerdes S, El Yacoubi B, Bailly M, Blaby IK, Blaby-Haas CE, Jeanguenin L, Lara-Núñez A, Pribat A, Waller JC, Wilke A, Overbeek R, Hanson AD, de Crécy-Lagard V.

    BMC Genomics. 2011 Jun 15;12 Suppl 1:S2.

    PMID:
    21810204
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    The functional landscape of mouse gene expression.

    Zhang W, Morris QD, Chang R, Shai O, Bakowski MA, Mitsakakis N, Mohammad N, Robinson MD, Zirngibl R, Somogyi E, Laurin N, Eftekharpour E, Sat E, Grigull J, Pan Q, Peng WT, Krogan N, Greenblatt J, Fehlings M, van der Kooy D, Aubin J, Bruneau BG, Rossant J, Blencowe BJ, Frey BJ, Hughes TR.

    J Biol. 2004;3(5):21. Epub 2004 Dec 6.

    PMID:
    15588312
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Consolidating the set of known human protein-protein interactions in preparation for large-scale mapping of the human interactome.

    Ramani AK, Bunescu RC, Mooney RJ, Marcotte EM.

    Genome Biol. 2005;6(5):R40. Epub 2005 Apr 15.

    PMID:
    15892868
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    PFP: Automated prediction of gene ontology functional annotations with confidence scores using protein sequence data.

    Hawkins T, Chitale M, Luban S, Kihara D.

    Proteins. 2009 Feb 15;74(3):566-82.

    PMID:
    18655063
    [PubMed - indexed for MEDLINE]
    18.

    Globally predicting protein functions based on co-expressed protein-protein interaction networks and ontology taxonomy similarities.

    Zhu M, Gao L, Guo Z, Li Y, Wang D, Wang J, Wang C.

    Gene. 2007 Apr 15;391(1-2):113-9. Epub 2006 Dec 22.

    PMID:
    17289301
    [PubMed - indexed for MEDLINE]
    19.

    Mining protein networks for synthetic genetic interactions.

    Paladugu SR, Zhao S, Ray A, Raval A.

    BMC Bioinformatics. 2008 Oct 9;9:426.

    PMID:
    18844977
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    Combining classifiers to predict gene function in Arabidopsis thaliana using large-scale gene expression measurements.

    Lan H, Carson R, Provart NJ, Bonner AJ.

    BMC Bioinformatics. 2007 Sep 21;8:358.

    PMID:
    17888165
    [PubMed - indexed for MEDLINE]
    Free PMC Article

      Display Settings:

      Format
      Items per page
      Sort by

      Send to:

      Choose Destination

      Supplemental Content

      Find related data

      Write to the Help Desk