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    Results: 1 to 20 of 100

    1.

    Calling on a million minds for community annotation in WikiProteins.

    Mons B, Ashburner M, Chichester C, van Mulligen E, Weeber M, den Dunnen J, van Ommen GJ, Musen M, Cockerill M, Hermjakob H, Mons A, Packer A, Pacheco R, Lewis S, Berkeley A, Melton W, Barris N, Wales J, Meijssen G, Moeller E, Roes PJ, Borner K, Bairoch A.

    Genome Biol. 2008;9(5):R89. Epub 2008 May 28.

    PMID:
    18507872
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    BOWiki: an ontology-based wiki for annotation of data and integration of knowledge in biology.

    Hoehndorf R, Bacher J, Backhaus M, Gregorio SE Jr, Loebe F, Prüfer K, Uciteli A, Visagie J, Herre H, Kelso J.

    BMC Bioinformatics. 2009 May 6;10 Suppl 5:S5.

    PMID:
    19426462
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    PDBWiki: added value through community annotation of the Protein Data Bank.

    Stehr H, Duarte JM, Lappe M, Bhak J, Bolser DM.

    Database (Oxford). 2010 Jul 6;2010:baq009. Print 2010.

    PMID:
    20624717
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    Infrastructure for the life sciences: design and implementation of the UniProt website.

    Jain E, Bairoch A, Duvaud S, Phan I, Redaschi N, Suzek BE, Martin MJ, McGarvey P, Gasteiger E.

    BMC Bioinformatics. 2009 May 8;10:136.

    PMID:
    19426475
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    The proteios software environment: an extensible multiuser platform for management and analysis of proteomics data.

    Häkkinen J, Vincic G, Månsson O, Wårell K, Levander F.

    J Proteome Res. 2009 Jun;8(6):3037-43.

    PMID:
    19354269
    [PubMed - indexed for MEDLINE]
    6.

    ArrayWiki: an enabling technology for sharing public microarray data repositories and meta-analyses.

    Stokes TH, Torrance JT, Li H, Wang MD.

    BMC Bioinformatics. 2008 May 28;9 Suppl 6:S18.

    PMID:
    18541053
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Building biomedical web communities using a semantically aware content management system.

    Das S, Girard L, Green T, Weitzman L, Lewis-Bowen A, Clark T.

    Brief Bioinform. 2009 Mar;10(2):129-38. Epub 2008 Dec 6.

    PMID:
    19060302
    [PubMed - indexed for MEDLINE]
    Free Article
    8.

    The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes.

    Meyer F, Paarmann D, D'Souza M, Olson R, Glass EM, Kubal M, Paczian T, Rodriguez A, Stevens R, Wilke A, Wilkening J, Edwards RA.

    BMC Bioinformatics. 2008 Sep 19;9:386.

    PMID:
    18803844
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    LeishCyc: a biochemical pathways database for Leishmania major.

    Doyle MA, MacRae JI, De Souza DP, Saunders EC, McConville MJ, Likić VA.

    BMC Syst Biol. 2009 Jun 5;3:57.

    PMID:
    19497128
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    PiQSi: protein quaternary structure investigation.

    Levy ED.

    Structure. 2007 Nov;15(11):1364-7.

    PMID:
    17997962
    [PubMed - indexed for MEDLINE]
    11.

    Creating 2DE databases for the World Wide Web.

    Hoogl C, Mostaguir K, Appel RD.

    Methods Mol Biol. 2009;519:533-9.

    PMID:
    19381608
    [PubMed - indexed for MEDLINE]
    12.

    Transdab wiki: the interactive transglutaminase substrate database on web 2.0 surface.

    Csosz E, Meskó B, Fésüs L.

    Amino Acids. 2009 Apr;36(4):615-7. Epub 2008 Jul 2. Review.

    PMID:
    18594947
    [PubMed - indexed for MEDLINE]
    13.

    MIAPEGelDB, a web-based submission tool and public repository for MIAPE gel electrophoresis documents.

    Robin X, Hoogland C, Appel RD, Lisacek F.

    J Proteomics. 2008 Jul 21;71(2):249-51. Epub 2008 Jun 14.

    PMID:
    18590991
    [PubMed - indexed for MEDLINE]
    14.

    The Flannotator--a gene and protein expression annotation tool for Drosophila melanogaster.

    Ryder E, Spriggs H, Drummond E, St Johnston D, Russell S.

    Bioinformatics. 2009 Feb 15;25(4):548-9. Epub 2009 Jan 6.

    PMID:
    19126575
    [PubMed - indexed for MEDLINE]
    Free Article
    15.

    GeneDistiller--distilling candidate genes from linkage intervals.

    Seelow D, Schwarz JM, Schuelke M.

    PLoS One. 2008;3(12):e3874. Epub 2008 Dec 5.

    PMID:
    19057649
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Pharmspresso: a text mining tool for extraction of pharmacogenomic concepts and relationships from full text.

    Garten Y, Altman RB.

    BMC Bioinformatics. 2009 Feb 5;10 Suppl 2:S6.

    PMID:
    19208194
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    A comprehensive protein-centric ID mapping service for molecular data integration.

    Huang H, McGarvey PB, Suzek BE, Mazumder R, Zhang J, Chen Y, Wu CH.

    Bioinformatics. 2011 Apr 15;27(8):1190-1.

    PMID:
    21478197
    [PubMed - indexed for MEDLINE]
    18.

    SMART 6: recent updates and new developments.

    Letunic I, Doerks T, Bork P.

    Nucleic Acids Res. 2009 Jan;37(Database issue):D229-32. Epub 2008 Oct 31.

    PMID:
    18978020
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    HAMAP: a database of completely sequenced microbial proteome sets and manually curated microbial protein families in UniProtKB/Swiss-Prot.

    Lima T, Auchincloss AH, Coudert E, Keller G, Michoud K, Rivoire C, Bulliard V, de Castro E, Lachaize C, Baratin D, Phan I, Bougueleret L, Bairoch A.

    Nucleic Acids Res. 2009 Jan;37(Database issue):D471-8. Epub 2008 Oct 11.

    PMID:
    18849571
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    A pitfall of wiki solution for biological databases.

    Arita M.

    Brief Bioinform. 2009 May;10(3):295-6. Epub 2008 Dec 6.

    PMID:
    19060305
    [PubMed - indexed for MEDLINE]
    Free Article

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